Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_F20
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.34 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   1.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   1.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.2  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   4.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   4.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   4.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.7  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   9.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -1

Query: 198 LMLENSVSITEKSPSLMGIFLLRPLSAIFHVICRGEIVETKQTLKRSRVNTFHWNNTHS 22
           L++ N VSIT++ P+     +    S  F  +    I  T   +  S++N+FHW+ T S
Sbjct: 194 LLMPNDVSITDE-PAYQYRGIALDTSRNFVTV--DVIKRTLDGMAASKLNSFHWHITDS 249


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 579 PLSLRCPGTACLPWKRPCHNSPSRTGTFLSRSTERSHHS 695
           PL+    G    PWK+    +PS + T  S  T+R+  S
Sbjct: 54  PLADAAVGKGFHPWKKSPQGAPSPSSTPSSLPTQRTSTS 92


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 720 ICCLSGLVANDETAQCFW 667
           I C +GLV ND+   C W
Sbjct: 136 ITCPNGLVYNDKAGICSW 153


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -3

Query: 640 ELWQGRFHGKHAVPG--QRRLNG--LRICSLGQQKLPVVFSVHRFRI 512
           EL+Q +  G   V     R L G  L   +  ++ L V+F++H+FRI
Sbjct: 615 ELYQIQEDGSRGVIAFASRSLRGPELNYTTTEKELLGVIFALHKFRI 661


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +3

Query: 558 PREQILRPLSLRCPGTACLPWKRPCHNSPSRTGTFLSRSTE 680
           P++ I+   S+  P    +  KRP   +P RT   ++ +++
Sbjct: 26  PQQSIIVSGSITQPTKTVIQSKRPLAPAPERTSVLVTNNSD 66


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 468  STTNYWSTPNTRRNLIRNLCTENTT 542
            +T+ +W+T  TRR       T +TT
Sbjct: 1047 TTSPWWTTTTTRRTTTTRPTTTSTT 1071



 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 468  STTNYWSTPNTRRNLIRNLCT 530
            STTN+W T  T     R   T
Sbjct: 1178 STTNHWQTKTTTSTTTRPTTT 1198


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 54  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 161
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 54  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 161
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 54  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 161
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 539 NREFLLPKGTNPEAIKSSLSRDGVLT 616
           N + L PKG N   I+  +  +GVL+
Sbjct: 833 NNKRLEPKGDNRYTIREEILANGVLS 858


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 437 YTPEEIVVKTVDNKLLVHAKHEEKSDT 517
           YTP+   +   +N   +  KHE++++T
Sbjct: 2   YTPKLSQMDISENSTYLFDKHEDRNNT 28


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = -3

Query: 622 FHGKHAVPGQRRLNGLRICSLGQQKLPVVFSVHRFRIR 509
           FH  H +  +RR+       L ++++ + F   R +++
Sbjct: 242 FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 279


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 567 VPLGNKNSLLYSLYTDFVSDFSSCLAWT 484
           V L    ++LY L  D V++F+    W+
Sbjct: 150 VGLIRDTAVLYRLLADNVANFNKIFGWS 177


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = -3

Query: 622 FHGKHAVPGQRRLNGLRICSLGQQKLPVVFSVHRFRIR 509
           FH  H +  +RR+       L ++++ + F   R +++
Sbjct: 24  FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,381
Number of Sequences: 336
Number of extensions: 3870
Number of successful extensions: 34
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)