Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_F19
(840 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM712903-1|CAN84642.1| 148|Tribolium castaneum hypothetical pro... 48 7e-08
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 27 0.18
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 0.99
AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical pro... 23 3.0
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 23 4.0
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 22 5.3
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 7.0
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 21 9.2
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 9.2
>AM712903-1|CAN84642.1| 148|Tribolium castaneum hypothetical
protein protein.
Length = 148
Score = 48.4 bits (110), Expect = 7e-08
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Frame = +1
Query: 142 VSLRSGEFMVVACPGSRNHIVLGNETGNGRQFDVLDAKCVEKTSFLLGGWRGEFRNVTCK 321
V + +GE ++++CPG + + N Q +L C T F G +FR + C
Sbjct: 9 VEINNGETIIISCPGG----FVMEDANNLTQSTILTT-CESNTDFSFGSKTIDFRKIQCS 63
Query: 322 TQPWTTV-YDTKKSCHLNSKLYRIGYEIQK--AFYSLYEACFDLSEMKTHYVTHVLTPF 489
P Y K +C + ++ +GY+++ F + CFD ++ + Y ++ +T F
Sbjct: 64 NSPLRKARYTEKGTCKMGREI-EVGYDLKSPDRFVRQFTICFDDVDLNSLYSSYEITRF 121
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 27.1 bits (57), Expect = 0.18
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 296 PLQPPNRNDVFSTHLASKTSNCLPFPVSLPRTMWLRLP 183
P +P ++N HL S +NC P P + + L P
Sbjct: 75 PFRPMHQNSYTGYHLGSYAANCPPSPKDDEKCLSLERP 112
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.6 bits (51), Expect = 0.99
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +1
Query: 298 EFRNVTCKTQPWTTVYDTKKSCHLNSKLYRIGYEIQKAFYSLYEACFDLSEMKTH 462
E + +TC P+ T Y HL + ++ K Y+ S MK+H
Sbjct: 227 EDKRLTCPKCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSH 281
>AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical
protein protein.
Length = 102
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 598 RILGTNSTELYNKRQALTRGHLAPRADFPLRAQMRATFQY 717
R G+N ++ N T GHL + PLR+ R+ +Y
Sbjct: 13 RTNGSNFSKFINCHY--TSGHLLGSSSLPLRSFYRSRIRY 50
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 492 RKRRQYVCDIM 460
RKRRQY+C ++
Sbjct: 722 RKRRQYLCPVL 732
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 560 NCILNGIKWKLWRGSSERTALSCITNDRL*LVVTWPLAQTSLF 688
+CILN KW+L + ++ T D V P+ Q L+
Sbjct: 96 SCILNQDKWRLLNNNFQQIDKIFKTRDDRVKVYQAPVLQLFLY 138
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 21.8 bits (44), Expect = 7.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 777 GFQSPPVAGIDCPPLRGRVYVLECGPHLRSK 685
G +SPPVAG + P + E L SK
Sbjct: 1124 GSKSPPVAGFEESPHSKFLKYTELAKQLSSK 1154
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -3
Query: 82 YRNRSSMTGRNQHLRRNCSKTNNH 11
+RN T N+ N + +NNH
Sbjct: 364 WRNNQPSTSNNRWHNNNGNNSNNH 387
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 148 LRSGEFMVVACPGSRNHIV 204
+ +GE+ ++ PG +N IV
Sbjct: 172 ITNGEWYLIGMPGKKNTIV 190
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 148 LRSGEFMVVACPGSRNHIV 204
+ +GE+ ++ PG +N IV
Sbjct: 172 ITNGEWYLIGMPGKKNTIV 190
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 148 LRSGEFMVVACPGSRNHIV 204
+ +GE+ ++ PG +N IV
Sbjct: 172 ITNGEWYLIGMPGKKNTIV 190
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 148 LRSGEFMVVACPGSRNHIV 204
+ +GE+ ++ PG +N IV
Sbjct: 172 ITNGEWYLIGMPGKKNTIV 190
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 148 LRSGEFMVVACPGSRNHIV 204
+ +GE+ ++ PG +N IV
Sbjct: 172 ITNGEWYLIGMPGKKNTIV 190
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.2
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 290 GGVSLETSRAKLSRGPRCTTRKRVAI*TVSCTGSD 394
GG +L S R CT RV +V G D
Sbjct: 127 GGANLTNSLTGPVRPAACTPDSRVGYGSVGLVGGD 161
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,314
Number of Sequences: 336
Number of extensions: 4544
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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