Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_F19
         (840 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23513-5|AAP68948.1|  214|Caenorhabditis elegans Hypothetical pr...    31   1.3  
U23513-4|AAP68947.1|  322|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z49074-1|CAA88893.3|  771|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z49073-8|CAA88892.3|  771|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass...    30   2.4  
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr...    29   4.1  
L14429-4|AAA28217.2|  171|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF024503-12|AAG24092.2|  329|Caenorhabditis elegans Serpentine r...    28   7.2  

>U23513-5|AAP68948.1|  214|Caenorhabditis elegans Hypothetical
           protein D2021.2b protein.
          Length = 214

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 240 VKLSSVSRFVAENDVVAASGAGHHHKFTASQTYSV 136
           V+++ +S+ V  ND + A  AGH H  + S  Y+V
Sbjct: 154 VQMNQISQGVTTNDRIKARRAGHAHSHSGSTDYNV 188


>U23513-4|AAP68947.1|  322|Caenorhabditis elegans Hypothetical
           protein D2021.2a protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 240 VKLSSVSRFVAENDVVAASGAGHHHKFTASQTYSV 136
           V+++ +S+ V  ND + A  AGH H  + S  Y+V
Sbjct: 262 VQMNQISQGVTTNDRIKARRAGHAHSHSGSTDYNV 296


>Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +1

Query: 256 CVEKTSFLLGGWRGEFRNVTCKTQPWTTVYDTKKSCH--LNSKLYRI---GYEI-----Q 405
           C     F  GGW  +  +V  K   W T+Y+T+++ H  +   +++I    Y +     +
Sbjct: 127 CDNFYQFACGGWINQ--SVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE 184

Query: 406 KAFYSLYEACFDLSEMK 456
           +A   +YE C D   ++
Sbjct: 185 RAAAKMYEQCMDTDTLE 201


>Z49074-1|CAA88893.3|  771|Caenorhabditis elegans Hypothetical
           protein ZK970.1a protein.
          Length = 771

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +1

Query: 256 CVEKTSFLLGGWRGEFRNVTCKTQPWTTVYDTKKSCH--LNSKLYRI---GYEI-----Q 405
           C     F  GGW  +  +V  K   W T+Y+T+++ H  +   +++I    Y +     +
Sbjct: 91  CDNFYQFACGGWINQ--SVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE 148

Query: 406 KAFYSLYEACFDLSEMK 456
           +A   +YE C D   ++
Sbjct: 149 RAAAKMYEQCMDTDTLE 165


>Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +1

Query: 256 CVEKTSFLLGGWRGEFRNVTCKTQPWTTVYDTKKSCH--LNSKLYRI---GYEI-----Q 405
           C     F  GGW  +  +V  K   W T+Y+T+++ H  +   +++I    Y +     +
Sbjct: 127 CDNFYQFACGGWINQ--SVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE 184

Query: 406 KAFYSLYEACFDLSEMK 456
           +A   +YE C D   ++
Sbjct: 185 RAAAKMYEQCMDTDTLE 201


>Z49073-8|CAA88892.3|  771|Caenorhabditis elegans Hypothetical
           protein ZK970.1a protein.
          Length = 771

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +1

Query: 256 CVEKTSFLLGGWRGEFRNVTCKTQPWTTVYDTKKSCH--LNSKLYRI---GYEI-----Q 405
           C     F  GGW  +  +V  K   W T+Y+T+++ H  +   +++I    Y +     +
Sbjct: 91  CDNFYQFACGGWINQ--SVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE 148

Query: 406 KAFYSLYEACFDLSEMK 456
           +A   +YE C D   ++
Sbjct: 149 RAAAKMYEQCMDTDTLE 165


>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 59 protein.
          Length = 1592

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 126 RNQELIVLYVDRRWITEIGVQ*QDATSIYVV 34
           R +  +++Y DRRWIT +    QD  ++Y V
Sbjct: 129 REERDVLVYGDRRWITNLHYAFQDEKNLYFV 159


>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical protein
            C46A5.4 protein.
          Length = 1432

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +1

Query: 58   LSLNSDFGNPSPVYIKNNQFLIPNLTDRVSLRSGEFMVVACPGSRNHI 201
            ++L   F NPSPVY KN+  +   L   +   S  F        RNH+
Sbjct: 1138 VNLTETFSNPSPVYDKNSGHMESILMGLIGANSMAFDRHIVTAVRNHL 1185


>L14429-4|AAA28217.2|  171|Caenorhabditis elegans Hypothetical
           protein ZK652.8 protein.
          Length = 171

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +1

Query: 298 EFRNVTCKTQPWTT-VYDTK-KSCHLNSKLYRIGYEIQKAFYSLYEACFDLSEMKTHY 465
           E  NV  +T+ W   ++D   K   ++ ++ R+G E++K    +  AC D+  M+  +
Sbjct: 100 EIENVETQTRIWLNELHDVHDKRVDIDCQMIRLGSEVKKNETYVQLACIDIERMELRH 157


>AF024503-12|AAG24092.2|  329|Caenorhabditis elegans Serpentine
           receptor, class u protein25 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 263 STHLASKTSNCLPFPVSLPRTMWLRLPGQATTINSPLLKLTLSVRFGIKN*L-FFM*TGD 87
           +T+  + +    PF V+L R   +  P Q   IN  +LK+++ + F       FFM TG 
Sbjct: 116 TTYYLNYSLMLFPFLVALLRLNLIVFPSQHRKINETILKISIPIVFIYPFFFTFFMFTGS 175

Query: 86  G 84
           G
Sbjct: 176 G 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,972,931
Number of Sequences: 27780
Number of extensions: 440022
Number of successful extensions: 1181
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)