Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_F16
(733 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 130 1e-30
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 70 2e-12
SB_55759| Best HMM Match : SH2 (HMM E-Value=0.082) 67 1e-11
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_48419| Best HMM Match : SH2 (HMM E-Value=4.6e-13) 57 1e-08
SB_51792| Best HMM Match : SH2 (HMM E-Value=6.3e-24) 56 3e-08
SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25) 55 7e-08
SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22) 54 9e-08
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 54 9e-08
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24) 50 3e-06
SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16) 49 3e-06
SB_18647| Best HMM Match : SH2 (HMM E-Value=7.3e-16) 49 3e-06
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 48 6e-06
SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22) 48 8e-06
SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10) 44 1e-04
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18) 44 2e-04
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_6049| Best HMM Match : SH2 (HMM E-Value=8.4e-30) 42 7e-04
SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06) 42 7e-04
SB_22865| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13732| Best HMM Match : SH2 (HMM E-Value=3.6e-12) 40 0.002
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 39 0.005
SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_17929| Best HMM Match : SH2 (HMM E-Value=5e-08) 36 0.045
SB_48515| Best HMM Match : SH2 (HMM E-Value=3.1) 35 0.059
SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07) 35 0.059
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_48802| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25) 29 5.1
SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39) 29 5.1
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 28 6.8
SB_44680| Best HMM Match : Gemini_V1 (HMM E-Value=4) 28 6.8
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_45596| Best HMM Match : rve (HMM E-Value=1.8e-07) 28 9.0
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 28 9.0
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 130 bits (314), Expect = 1e-30
Identities = 60/126 (47%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Frame = +3
Query: 306 AKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHN-KYDVGSGEQF 482
+KE E+++++KGKNGSFLVRESQ+ PG+YVL+ R R++HV+IR N KYDVG GE F
Sbjct: 585 SKEGETVLLDKGKNGSFLVRESQSKPGDYVLTARCDDRITHVMIRNHPNGKYDVGGGEMF 644
Query: 483 DDLVGLIEHFRSYPMIETSGDVLRLLQPVSGTRLRAHDIDQKVQEMQGIEDRQKMECNTG 662
+DL L+EH++ PM+E SG V+ L P + TR+ A I+ +V+E+Q ++ + + G
Sbjct: 645 EDLTDLVEHYKKNPMVEKSGTVVHLRNPFNATRINAASIEDRVKELQ--KENKNVTGKAG 702
Query: 663 FDGEFQ 680
F EF+
Sbjct: 703 FYEEFE 708
Score = 81.4 bits (192), Expect = 7e-16
Identities = 38/98 (38%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDV 464
WFH +S +AE L++E+G +GS+LVR S+++PG++ LSVR G V+H+ I+ + YD+
Sbjct: 480 WFHSNVSGHDAERLLIERGLHGSYLVRPSKSNPGDFTLSVRRNGDVTHIKIQNTGDYYDL 539
Query: 465 GSGEQFDDLVGLIEHFRSYP--MIETSGDVLRLLQPVS 572
GE+F L LI+++ P + E +G V+ + P++
Sbjct: 540 YGGEKFATLSELIQYYTENPGQLREKNGQVIEMKFPLN 577
>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 526
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDV 464
WFHG + +++E L+ + +G FLVRES+ + G+Y LSV G+V H + + N V
Sbjct: 203 WFHGKIEREKSEELLQPR-TDGLFLVRESRNYVGDYTLSVCCNGKVEHYRVIFKDNMLTV 261
Query: 465 GSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPV--SGTRLRAHDIDQKVQEMQGIEDR 638
E F++L L+EH+++ ++ G RL QPV SG + D + V+E I+
Sbjct: 262 DEEEYFENLTKLVEHYQN----DSDGLCTRLRQPVKKSGRYNYSVDSESFVKEGWSIQKS 317
Query: 639 QKMECNTGFDGEFQSLKL 692
+ + T GEF + L
Sbjct: 318 ELIIKETIGKGEFGDVLL 335
>SB_55759| Best HMM Match : SH2 (HMM E-Value=0.082)
Length = 42
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/39 (69%), Positives = 36/39 (92%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLS 401
WFHG MS+KE E+++++KGKNGSFLVRESQ+ PG+YVL+
Sbjct: 2 WFHGHMSSKEGETVLLDKGKNGSFLVRESQSKPGDYVLT 40
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 66.9 bits (156), Expect = 2e-11
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHN-K 455
++WF G + +AE L++ G++GSFL+RES++ PG+Y LS+R V H IR N
Sbjct: 125 EEWFFGAIRRVDAEKLLIMHGESGSFLIRESESKPGDYSLSLRDGDNVKHYRIRCLDNGG 184
Query: 456 YDVGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPVSGTRL 584
+ + QF L+ L+EH+ + G V RL +P L
Sbjct: 185 FYIAHRAQFATLIDLVEHYNK----DCDGLVSRLKKPCPAIEL 223
>SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 62.1 bits (144), Expect = 5e-10
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +3
Query: 228 GAIVSTVLKELSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVR 407
G + S+ +K ++ + W+HG +S AE L+ G NGSFLVRES++ PG+ +S+R
Sbjct: 85 GWVPSSYIKPVN-SLEKHSWYHGQISRNAAEYLL-SSGINGSFLVRESESSPGQLSISLR 142
Query: 408 VRGRVSHVLIRRQ-HNKYDVGSGEQFDDLVGLIEH 509
RV H + NKY V S +F + L+ H
Sbjct: 143 YDERVYHYRVSTSVDNKYYVSSDNRFSTIAELVHH 177
>SB_48419| Best HMM Match : SH2 (HMM E-Value=4.6e-13)
Length = 274
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGK--NGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKY 458
WFHG +S EA L+ + + +G FL+R+S+ GEYVL+ +GR H+ + +
Sbjct: 109 WFHGTLSRIEASQLVSQGSQQWHGIFLIRQSETRRGEYVLTFNYQGRAKHLRLSLNNEGQ 168
Query: 459 DVGSGEQFDDLVGLIEHFRSYPMIETSG 542
F + ++EHFR+ P+ SG
Sbjct: 169 CRVQHLWFPSIFEMLEHFRANPIPLESG 196
>SB_51792| Best HMM Match : SH2 (HMM E-Value=6.3e-24)
Length = 189
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKN-GSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKY- 458
WFHG MS + A ++++ GK G FLVRES+ PG+YVLS+ + H I+ + + Y
Sbjct: 9 WFHGEMSREAAVDILVKHGKKEGLFLVRESKTIPGDYVLSLWTTNQALHFQIQCRGDIYF 68
Query: 459 DVGSGEQFDDLVGLIEHFR 515
+ G F L L++++R
Sbjct: 69 CIDDGPIFHGLDSLVDYYR 87
>SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25)
Length = 389
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +3
Query: 282 KWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYD 461
+W+HG + K E + G+ G++LVRES P + LS + + H I Y
Sbjct: 53 RWYHGKLDRKTCEERLAADGRIGAYLVRESDRKPATFSLSYLGKNGIVHFRISNVCGDYY 112
Query: 462 VGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLL---QPVSGTR 581
+G G QFD L LI ++ S+ + ++ + +PV G R
Sbjct: 113 IG-GRQFDSLSDLIGYYTSWSCLLKGEQLVHPVAPPEPVEGRR 154
>SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22)
Length = 192
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLV--RESQAHPGE--YVLSVRVRGRVSHVLIRRQHN 452
W+H ++ AE ++ K+G+FLV RE GE Y +S R ++ H +RR+
Sbjct: 2 WYHDNLTRSAAEDMLKRVRKDGAFLVRRRERDDRTGEESYAISFRAEKKIKHCKLRREGR 61
Query: 453 KYDVGSGEQFDDLVGLIEHFRSYPM 527
+ +G+ QF+ LV L+E + +P+
Sbjct: 62 LFSIGTA-QFESLVELVEFYMKHPL 85
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLV--RESQAHPGE--YVLSVRVRGRVSHVLIRRQHN 452
W+H ++ AE ++ K+G+FLV RE GE Y +S R ++ H +RR+
Sbjct: 97 WYHDNLTRSAAEDMLKRVRKDGAFLVRRRERDDRTGEESYAISFRAEKKIKHCKLRREGR 156
Query: 453 KYDVGSGEQFDDLVGLIEHFRSYPM 527
+ +G+ QF+ LV L+E + +P+
Sbjct: 157 LFSIGTA-QFESLVELVEFYMKHPL 180
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 279 KKWFHGVM--SAKEAESLIMEKGK-NGSFLVRESQAHPGEYVLS 401
+KWFHG + + AE + + + +GSFLVRES G++ LS
Sbjct: 51 EKWFHGKLPDGRRVAEQYLNQFNRGDGSFLVRESTTFVGDFSLS 94
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 52.0 bits (119), Expect = 5e-07
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGK-NGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRR-QHNKY 458
WF G + EAE ++ G G+FL+R+S+ PG + LSVR V H IR+ +
Sbjct: 142 WFFGKIKRAEAEKKLLAPGNPKGTFLIRDSETQPGNFSLSVRDGDNVKHYRIRKLDTGGF 201
Query: 459 DVGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPVSGTR 581
+ + F L L++H+ M + G L Q SG +
Sbjct: 202 YITTRAPFGSLTELVDHY----MQDADGLCCMLTQACSGEK 238
>SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24)
Length = 421
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGK-NGSFLVRESQAHPGEYVLSVRVRGRVSHV-LIRRQHNKY 458
+FHG +S +AE L+ GK +G +LVRES G Y LS+ +V H ++R K
Sbjct: 10 YFHGCISRFKAEELLARAGKRDGLYLVRESAHQLGSYALSMCNNHKVIHYQILRHADGKV 69
Query: 459 DVGSGEQFDDLVGLIEHFRSY 521
+ G +F V L++H + +
Sbjct: 70 GIEDGPRFPGPVELVQHHQQH 90
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 180 ALSACMDASVLAVPAAGAIVSTVLKE-LSKAF-MLKKWFHGVMSAKEAE 320
A +A M++ LA P A A V T ++ + K +KWFHG +S +EAE
Sbjct: 124 AATAAMESMGLA-PEADATVRTQMESFIGKVLHQSEKWFHGNISREEAE 171
>SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16)
Length = 896
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +3
Query: 342 KNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDVG-SG-EQFDDLVGLIEHFR 515
++G+FLVR S HP +Y +S+ +G V H+ I + KY +G SG E+F+ +V L+ ++R
Sbjct: 268 QDGAFLVRNSTRHPNDYSMSLLYKGDVRHLKIPEKDGKYILGDSGLEKFNTIVDLVNYYR 327
>SB_18647| Best HMM Match : SH2 (HMM E-Value=7.3e-16)
Length = 720
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 273 MLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQ 446
M W H ++ E E L++ G++G FL+R+S++ P +VLS+ +G + H I R+
Sbjct: 1 MTATWHHKAINRLETEKLLLGCGEDGGFLIRDSESIPNAFVLSILFQGHIHHYRILRE 58
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/113 (23%), Positives = 54/113 (47%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDV 464
WFHG++ K+ + + +G +LVRES PG++VLS R G + H +I+ + +
Sbjct: 408 WFHGIIQRKDVDKRLKS---DGEYLVRESATKPGQFVLSARSDGALRHFIIQTMEDGFVR 464
Query: 465 GSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPVSGTRLRAHDIDQKVQEMQ 623
+ F + L+++ ++ + T + PV +I + E++
Sbjct: 465 FEEQAFPCIRELLKYHITHHIPVTKKSNAMISTPVQRPPKDKWEISHSIVEIE 517
>SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22)
Length = 699
Score = 48.0 bits (109), Expect = 8e-06
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLI 437
K W+HG +S EAE L+ ++G FLVRES++ PG+YVLS + H+L+
Sbjct: 447 KDWYHGPISRGEAELLLEDEG---DFLVRESKSQPGQYVLSGIKDKQARHLLL 496
>SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10)
Length = 265
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +3
Query: 252 KELSKAFML---KKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRV 422
++LS+ FM + WF G M ++AE ++ + +GSFLVR+S V+SVR +
Sbjct: 157 RDLSRGFMNLSEQGWFWGAMRYEDAEQVLAGR-PDGSFLVRDSTNSFDLLVVSVRSQSTT 215
Query: 423 SHVLIRRQHNKYDVGSGEQ-FDDLVGLIE 506
HV + + + + G+Q ++ +V LIE
Sbjct: 216 IHVRVMYTNGCFHLSHGDQGYESVVELIE 244
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/92 (23%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +3
Query: 300 MSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDVGSGEQ 479
++ EA + M ++G+F+VR+S+ PGEY L++ G + + I + KY
Sbjct: 379 LTLMEAVNARMRDTEDGTFIVRDSKRFPGEYTLTLMKGGVIKLIRIMYKDGKYGFSEPLT 438
Query: 480 FDDLVGLIEHFRSYPMIETSGDV-LRLLQPVS 572
F ++ L+ +++ + + + + ++L P+S
Sbjct: 439 FKSVIDLVSYYKDRSLAQYNPKLDVKLAHPLS 470
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 309 KEAESLIMEKGKNGSFLVRESQAHPGEYVLSV 404
KEA + M ++G+F+VR+S+ PGEY L++
Sbjct: 350 KEAVNARMRDTEDGTFIVRDSKRFPGEYTLTL 381
>SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18)
Length = 453
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 288 FHGVMSAKEAESLIMEKGK--NGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYD 461
FHG +S ++ L+ G NG FLVRES + PG+Y LS+ G V H + Y
Sbjct: 59 FHGKISREQVVELLTGAGGTVNGRFLVRESLSAPGDYSLSLTFGGEVEHYRLFYIDGMYS 118
Query: 462 VGSGEQ--FDDLVGLI 503
++ F ++V L+
Sbjct: 119 TSKTDEKRFPNIVDLV 134
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIME-KGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQH-N 452
++WF+G + EAE L+ ++G+FL+R+S + G + LS+R + H IR+
Sbjct: 134 EEWFYGPIKRPEAEKLLQSPPNEHGAFLIRDS--NKGLFALSMRDGDMIKHYRIRKSDTG 191
Query: 453 KYDVGSGEQFDDLVGLIEHFR 515
+ + F L L+ H++
Sbjct: 192 GFFISHNNVFTSLKDLVAHYK 212
>SB_6049| Best HMM Match : SH2 (HMM E-Value=8.4e-30)
Length = 94
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIME-KGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQH-NKY 458
WF+G + EAE L+ ++G+FL+R+S + G + LS+R + H IR+ +
Sbjct: 2 WFYGPIKRPEAEKLLQSPPNEHGAFLIRDS--NKGLFALSMRDGDMIKHYRIRKSDTGGF 59
Query: 459 DVGSGEQFDDLVGLIEHFR 515
+ F L L+ H++
Sbjct: 60 FISHNNVFTSLKDLVAHYK 78
>SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06)
Length = 1425
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = +3
Query: 261 SKAFMLKK--WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVS-HV 431
S A L+K WFHG ++A+ AE L+ +G G FLVRE A PG Y ++VR + + + H+
Sbjct: 308 SAARQLEKSPWFHGKITAEYAEMLM--RGA-GEFLVREDPAMPGMYFIAVRNKEQETLHL 364
Query: 432 LIRR-QHNK 455
I + H+K
Sbjct: 365 AITKVNHSK 373
>SB_22865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Frame = +3
Query: 240 STVLKELSKAFMLKKWFHGVMSAKEAESLIMEKG-KNGSFLVRESQAHPGEYVLSVRVRG 416
S+ KEL++ F WFHG +S EA L+ +G ++G FLVRES + YVL+ +
Sbjct: 16 SSTGKELAEEF----WFHGRISHDEALVLMKREGFEDGLFLVRESCSVSDVYVLTFCMNK 71
Query: 417 RVSHVLIRRQHNK-----YDVGSGEQFDDLVGLIEHFR 515
+V H + + Y + G F ++ LI +++
Sbjct: 72 KVFHCQLVQDIGPGSKMYYRLDKGPAFPSILELIRYYQ 109
>SB_13732| Best HMM Match : SH2 (HMM E-Value=3.6e-12)
Length = 135
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Frame = +3
Query: 240 STVLKELSKAFMLKKWFHGVMSAKEAESLIMEKG-KNGSFLVRESQAHPGEYVLSVRVRG 416
S+ KEL++ F WFHG +S EA L+ +G ++G FLVRES + YVL+ +
Sbjct: 16 SSTGKELAEEF----WFHGRISHDEALVLMKREGFEDGLFLVRESCSVSDVYVLTFCMNK 71
Query: 417 RVSHVLIRRQHNK-----YDVGSGEQFDDLVGLIEHFR 515
+V H + + Y + G F ++ LI +++
Sbjct: 72 KVFHCQLVQDIGPGSKMYYRLDKGPAFPSILELIRYYQ 109
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 270 FMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQ 374
F+ ++WF G +S ++ E L++ G +G FLVRES+
Sbjct: 371 FVNQEWFWGRISRRQGEQLLLNHGTDGDFLVRESE 405
>SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +3
Query: 327 IMEKGKNGSFLVRESQAHPGEYVLSVRVRGRV------SHVLIRRQHNKYDVGSGEQFDD 488
+++ + GSF VR+SQ+ PG + L+VRV V ++++ G F D
Sbjct: 514 MLQASEEGSFFVRDSQSKPGCHALTVRVPTEVHASGFGNYLITPIPEGVKLEGFSRTFTD 573
Query: 489 LVGLIEHF 512
LV LIE++
Sbjct: 574 LVSLIEYY 581
>SB_17929| Best HMM Match : SH2 (HMM E-Value=5e-08)
Length = 170
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +3
Query: 327 IMEKGKNGSFLVRESQAHPGEYVLSVRVRGRV------SHVLIRRQHNKYDVGSGEQFDD 488
+++ + GSF VR+SQ+ PG + L+VRV V ++++ G F D
Sbjct: 51 MLQASEEGSFFVRDSQSKPGCHALTVRVPTEVHASGFGNYLITPIPEGVKLEGFSRTFTD 110
Query: 489 LVGLIEHF 512
LV LIE++
Sbjct: 111 LVSLIEYY 118
>SB_48515| Best HMM Match : SH2 (HMM E-Value=3.1)
Length = 40
Score = 35.1 bits (77), Expect = 0.059
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 288 FHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSV 404
F G M EAE M + +G+FLVRES GEY LSV
Sbjct: 2 FAGKMDRTEAEQETMGRS-DGTFLVRESANRAGEYALSV 39
>SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)
Length = 507
Score = 35.1 bits (77), Expect = 0.059
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +3
Query: 237 VSTVLKELSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRG 416
+S+ LK LS W+ G MS+KEAE + + +G FLVR+S+ +S R +G
Sbjct: 333 LSSSLKTLSNC----GWYWGPMSSKEAEKELYNQ-PDGCFLVRDSENDYHLLSVSFRSKG 387
Query: 417 RVSHVLIRRQHNKYDVGSGEQFDD 488
H + K+ E D
Sbjct: 388 ATCHTRLIYNKGKFSFFQDEMGKD 411
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 29.9 bits (64), Expect = 2.2
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Frame = +3
Query: 294 GVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYV-LSVRVRG-RVSHVLIRRQHNKYDVG 467
GV+++ A+ I + FL R + H L+ G R+ V + ++ +DV
Sbjct: 1236 GVIASSSADKTIRLWNPSDEFL-RSLEGHEDRVTSLAFSKNGKRLVSVALDKKLKVWDVE 1294
Query: 468 SGEQFDDLVGLIEHFRSYP-----------MIETSGDVLRLL----QPVSGTRLRAHDID 602
SG D L G YP M+ T GD L LL + S TRL++H ID
Sbjct: 1295 SGNLLDTLTG----HDGYPVCCAWNPVDNTMVATCGDNLELLIWDLETKSSTRLKSHGID 1350
Query: 603 QKVQEMQGIEDRQKM 647
+ M D++K+
Sbjct: 1351 ---EAMVNFPDKKKL 1362
>SB_48802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 498 DPPGHRTAHRYLRRICCAVV 439
+P GH+ HRY RRICC +
Sbjct: 130 EPEGHK--HRYFRRICCTTL 147
>SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 158 ARSVGAGCPVGLHGCLRARSPGCRCNRLHGSQGVE-QGL----HAQKMVPRCYVSQRSRE 322
AR A G HG R +PG R +R H +G QG+ HA V S+RS
Sbjct: 324 AREPRASRRSGTHGA-RCENPGRRGDRAHRERGARTQGVAEIGHAWSAVREPRASRRSGT 382
Query: 323 PH 328
PH
Sbjct: 383 PH 384
>SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)
Length = 1088
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 508 CSIR-PTRSSNCS-PLPTSYLLCCRLIRTWLTR 416
CS+R T S P+P + +LC L TWLTR
Sbjct: 1038 CSLRMSTPGIGLSVPVPENMILCMHLAATWLTR 1070
>SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39)
Length = 587
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 490 RSSNCSPLPTSYLLCCRLIRTWLTR 416
R NC+PLP + C L+ +WL R
Sbjct: 185 REVNCTPLPDPFFPCEDLMGSWLLR 209
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 188 GLHGCLRARSPGCRCNRLHGSQGVEQGLHAQKMVPRCYVSQRSRE 322
GL +RAR R+ S G+++G H + PR S RE
Sbjct: 956 GLLREMRARDLHSSRERVLSSTGIDEGFHGENRSPRSLASSPRRE 1000
>SB_44680| Best HMM Match : Gemini_V1 (HMM E-Value=4)
Length = 248
Score = 28.3 bits (60), Expect = 6.8
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -3
Query: 317 GFFG*HNTVEPFFEHEGLAQLLENRGDDCTCSRDCEHGGIHAGRQGSRRQHSEPAQ-PWI 141
G+FG F G + L+ +G+ SR HGG G SR H + A+ P
Sbjct: 146 GWFGNSEVTRHFRGDSGTSVLIRVKGERVQVSRSSSHGGRVGG--VSRSTHRDAARGPKE 203
Query: 140 IFRHHSSLLH*NIFYKTWISLST*VVNKRATG-HR 39
+ +H +I K ISL T K+AT HR
Sbjct: 204 RHDGRTRAVHPDI--KIRISLFTDWFEKKATARHR 236
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 324 LIMEKGKNGSFLVRESQAH-PGEYVLSVRVRGRVSHVLIRRQHN-KYDVGSGEQFDDLVG 497
L++E G N V ES P V+ GR + +L Q D S + DLV
Sbjct: 172 LVLEGGMNTIRTVLESVTRSPAVPVVIAEGSGRAADILSYAQRFIVQDKSSEVEMTDLVD 231
Query: 498 LIEHFRSYPMIETS 539
++EH + IET+
Sbjct: 232 IVEHRKLLMKIETA 245
>SB_45596| Best HMM Match : rve (HMM E-Value=1.8e-07)
Length = 882
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 51 RAFVY-NSRRETYPSFIKNILVEKT*VMSKDNPRLSRL 161
R FVY N YP FIKN V + S +N +LS L
Sbjct: 384 REFVYFNGNPLDYPRFIKNFEVNVKAMSSDNNTKLSYL 421
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 27.9 bits (59), Expect = 9.0
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = +3
Query: 222 AAGAIVSTVLKELSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLS 401
AAG + S +L S L K+ ++ +AE ++ ++ S + + Y+
Sbjct: 1210 AAGHLYSWLLTPKSG---LVKFHDSLVGEDDAEESAVDLEQSTSGIYSHAATLLDSYITH 1266
Query: 402 VR-VRGRVSHVLIRRQHNKYD--VGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPVS 572
+R G H+ ++R + D + S Q D ++GL RSY + DV+ ++
Sbjct: 1267 LRDALGVKPHLNLKRATSMTDGDIESTLQGDSMLGLSTSLRSYVSADEDDDVMSVVSAPG 1326
Query: 573 G 575
G
Sbjct: 1327 G 1327
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,249,829
Number of Sequences: 59808
Number of extensions: 490219
Number of successful extensions: 1751
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -