Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_F16
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosi... 61 7e-10
AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyros... 61 7e-10
AC024796-4|AAK29898.3| 539|Caenorhabditis elegans C-terminal sr... 58 8e-09
AB096875-1|BAC76831.1| 539|Caenorhabditis elegans CSK-1 protein. 58 8e-09
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 56 3e-08
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 56 3e-08
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 54 1e-07
M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein ( C.ele... 54 1e-07
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 48 9e-06
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 48 9e-06
AF106584-2|AAC78222.2| 316|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z71262-1|CAA95813.1| 418|Caenorhabditis elegans Hypothetical pr... 45 6e-05
L07143-2|AAB37087.3| 437|Caenorhabditis elegans Protein kinase ... 41 8e-04
Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical p... 39 0.003
Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical p... 39 0.003
AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein. 38 0.007
AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyros... 38 0.007
AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene ... 38 0.007
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 36 0.039
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 36 0.039
Z68299-1|CAA92609.1| 390|Caenorhabditis elegans Hypothetical pr... 35 0.052
AL032626-4|CAA21524.1| 227|Caenorhabditis elegans Hypothetical ... 35 0.052
AF106583-4|AAD03135.1| 417|Caenorhabditis elegans Hypothetical ... 35 0.052
AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical ... 35 0.068
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 34 0.12
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 34 0.12
U41013-3|AAA82302.1| 433|Caenorhabditis elegans Protein kinase ... 34 0.12
U61958-1|AAB03183.1| 416|Caenorhabditis elegans Hypothetical pr... 33 0.16
U80450-10|AAB37834.1| 417|Caenorhabditis elegans Temporarily as... 33 0.21
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 33 0.21
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 33 0.21
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 33 0.21
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82086-5|CAB04992.2| 325|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z82086-3|CAB04997.1| 325|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical ... 29 4.5
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132876-1|CAB60842.2| 132|Caenorhabditis elegans Hypothetical ... 28 5.9
AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical... 28 5.9
Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical ... 28 7.8
>U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosine
phosphatase protein2 protein.
Length = 668
Score = 61.3 bits (142), Expect = 7e-10
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Frame = +3
Query: 255 ELSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVL 434
E + L +W+HG + A A L+ + KNG++L+R SQ PG V+S + G+V H+
Sbjct: 124 EEQRRTQLYRWWHGNLPASSANKLLQTE-KNGTYLLRASQHIPGALVISAKTEGQVVHLT 182
Query: 435 IRRQHN--KYDV-GSGEQFDDLVGLIEHFRSYPMIE--TSGDVLRLLQPVSGTRLRAH-D 596
I + + ++++ G +F LI+ + P++E + VL L +P+ T + A
Sbjct: 183 IYQDPSTGRFNIDGDRTKFQSAWLLIDSYSKNPIVEKGEASRVLYLEEPLFNTFIEADLF 242
Query: 597 IDQKVQEMQGIEDRQKMECNTGFDGEFQSL 686
+D+ + I R+ ME TG EF L
Sbjct: 243 VDRFEIIRRPINPRESME-KTGISEEFDRL 271
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Frame = +3
Query: 288 FHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRV-RGRVSHVLIRR-QHNKYD 461
F+ ++ ++AE L+ E G++G FL+R S+++P + +SVRV ++ H+ + + + +
Sbjct: 11 FYYRVNGEKAEELLKEYGEDGDFLLRYSESNPQNFSISVRVAEDKILHIKVTKYESDMLS 70
Query: 462 VGSGE-----QFDDLVGLIEHFRSYP--MIETSGDVLRLLQPV 569
+ E QF + L E + +P + E +G L L +PV
Sbjct: 71 IFEDERTTPNQFGSITELAEFYMEFPEKLREKNGLFLELKKPV 113
>AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyrosine
phosphatase protein.
Length = 668
Score = 61.3 bits (142), Expect = 7e-10
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Frame = +3
Query: 255 ELSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVL 434
E + L +W+HG + A A L+ + KNG++L+R SQ PG V+S + G+V H+
Sbjct: 124 EEQRRTQLYRWWHGNLPASSANKLLQTE-KNGTYLLRASQHIPGALVISAKTEGQVVHLT 182
Query: 435 IRRQHN--KYDV-GSGEQFDDLVGLIEHFRSYPMIE--TSGDVLRLLQPVSGTRLRAH-D 596
I + + ++++ G +F LI+ + P++E + VL L +P+ T + A
Sbjct: 183 IYQDPSTGRFNIDGDRTKFQSAWLLIDSYSKNPIVEKGEASRVLYLEEPLFNTFIEADLF 242
Query: 597 IDQKVQEMQGIEDRQKMECNTGFDGEFQSL 686
+D+ + I R+ ME TG EF L
Sbjct: 243 VDRFEIIRRPINPRESME-KTGISEEFDRL 271
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Frame = +3
Query: 288 FHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRV-RGRVSHVLIRR-QHNKYD 461
F+ ++ ++AE L+ E G++G FL+R S+++P + +SVRV ++ H+ + + + +
Sbjct: 11 FYYRVNGEKAEELLKEYGEDGDFLLRYSESNPQNFSISVRVAEDKILHIKVTKYESDMLS 70
Query: 462 VGSGE-----QFDDLVGLIEHFRSYP--MIETSGDVLRLLQPV 569
+ E QF + L E + +P + E +G L L +PV
Sbjct: 71 IFEDERTTPNQFGSITELAEFYMEFPEKLREKNGLFLELKKPV 113
>AC024796-4|AAK29898.3| 539|Caenorhabditis elegans C-terminal src
kinase protein 1 protein.
Length = 539
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +3
Query: 219 PAAGAIVSTVLKELSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVL 398
P A + S+ S A + WFH ++S + E L+ K +G+FLVRES PG++ L
Sbjct: 129 PGAASTTSSTSSHHSTAANHQPWFHSMISRENTEKLLRGK-PDGTFLVRESTNFPGDFTL 187
Query: 399 SVRVRGRVSHVLIRR-QHNKYDVGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPV 569
+ G+V H I + + E F +L L+ H++ + G RL+ P+
Sbjct: 188 CMSFHGKVEHYRIEQTSGGQLTCDKEEYFSNLTQLVSHYKR----DADGLCHRLVTPI 241
>AB096875-1|BAC76831.1| 539|Caenorhabditis elegans CSK-1 protein.
Length = 539
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +3
Query: 219 PAAGAIVSTVLKELSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVL 398
P A + S+ S A + WFH ++S + E L+ K +G+FLVRES PG++ L
Sbjct: 129 PGAASTTSSTSSHHSTAANHQPWFHSMISRENTEKLLRGK-PDGTFLVRESTNFPGDFTL 187
Query: 399 SVRVRGRVSHVLIRR-QHNKYDVGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPV 569
+ G+V H I + + E F +L L+ H++ + G RL+ P+
Sbjct: 188 CMSFHGKVEHYRIEQTSGGQLTCDKEEYFSNLTQLVSHYKR----DADGLCHRLVTPI 241
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/95 (30%), Positives = 53/95 (55%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDV 464
W+ G +S + AE L++ G+ G FLVR+S+++PG+ +S+R R H ++ +
Sbjct: 192 WYFGRISRERAEDLLLH-GREGEFLVRDSESNPGDLSISMRGIERNKHFKVQNVDGLLKI 250
Query: 465 GSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPV 569
G+ F D+ LI H+ + P+ + + L L P+
Sbjct: 251 GN-RTFVDMNALINHYTTSPIFSSPTEKLFLTGPL 284
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/95 (30%), Positives = 53/95 (55%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDV 464
W+ G +S + AE L++ G+ G FLVR+S+++PG+ +S+R R H ++ +
Sbjct: 301 WYFGRISRERAEDLLLH-GREGEFLVRDSESNPGDLSISMRGIERNKHFKVQNVDGLLKI 359
Query: 465 GSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPV 569
G+ F D+ LI H+ + P+ + + L L P+
Sbjct: 360 GN-RTFVDMNALINHYTTSPIFSSPTEKLFLTGPL 393
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQH-NKYD 461
W+HG +S ++E+ I+ G GSFLVRES+ G+Y +SVR GRV H I + K
Sbjct: 179 WYHGKISRSDSEA-ILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRINVDNTEKMF 237
Query: 462 VGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPVS 572
+ +F L L+ H + G + L+ P S
Sbjct: 238 ITQEVKFRTLGELVHHH----SVHADGLICLLMYPAS 270
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQH-NKYD 461
W+HG +S ++E+ I+ G GSFLVRES+ G+Y +SVR GRV H I + K
Sbjct: 184 WYHGKISRSDSEA-ILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRINVDNTEKMF 242
Query: 462 VGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPVS 572
+ +F L L+ H + G + L+ P S
Sbjct: 243 ITQEVKFRTLGELVHHH----SVHADGLICLLMYPAS 275
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQH-NKYD 461
W+HG +S ++E+ I+ G GSFLVRES+ G+Y +SVR GRV H I + K
Sbjct: 194 WYHGKISRSDSEA-ILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRINVDNTEKMF 252
Query: 462 VGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPVS 572
+ +F L L+ H + G + L+ P S
Sbjct: 253 ITQEVKFRTLGELVHHH----SVHADGLICLLMYPAS 285
>M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein (
C.elegans DNA homologousto the v-abl oncogene. ).
Length = 552
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQH-NKYD 461
W+HG +S ++E+ I+ G GSFLVRES+ G+Y +SVR GRV H I + K
Sbjct: 45 WYHGKISRSDSEA-ILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRINVDNTEKMF 103
Query: 462 VGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPVS 572
+ +F L L+ H + G + L+ P S
Sbjct: 104 ITQEVKFRTLGELVHHH----SVHADGLICLLMYPAS 136
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKG-KNGSFLVRESQAHPGEYVLSVRVRGRVSHV-LIRRQHNKY 458
W+ G ++ +AE L+ + ++G FLVR+ ++ PGE+ +SVR + V H ++R Q+ KY
Sbjct: 60 WYLGKITRNDAEVLLKKPTVRDGHFLVRQCESSPGEFSISVRFQDSVQHFKVLRDQNGKY 119
Query: 459 DVGSGEQFDDLVGLIEHFRSYPMIET 536
+ + +F+ L L+ + R+ + T
Sbjct: 120 YLWA-VKFNSLNELVAYHRTASVSRT 144
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKG-KNGSFLVRESQAHPGEYVLSVRVRGRVSHV-LIRRQHNKY 458
W+ G ++ +AE L+ + ++G FLVR+ ++ PGE+ +SVR + V H ++R Q+ KY
Sbjct: 60 WYLGKITRNDAEVLLKKPTVRDGHFLVRQCESSPGEFSISVRFQDSVQHFKVLRDQNGKY 119
Query: 459 DVGSGEQFDDLVGLIEHFRSYPMIET 536
+ + +F+ L L+ + R+ + T
Sbjct: 120 YLWA-VKFNSLNELVAYHRTASVSRT 144
>AF106584-2|AAC78222.2| 316|Caenorhabditis elegans Hypothetical
protein F54A5.3a protein.
Length = 316
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVR-VRGRVSHVLIRRQHNK 455
K W+HG +S ++A++L+ +G FLVR+S PG+YVLS R H+++ HN+
Sbjct: 209 KVWYHGNLSREDAQALLKTEG---DFLVRQSDHTPGKYVLSGRTAENEHKHLILLDNHNR 265
Query: 456 YDVGSGEQFDDLVGLIE-HFRSYPMIETSG----DVLRLLQPV 569
F ++ LI+ H + + + G L L++PV
Sbjct: 266 VRT-RDRTFSNISELIDYHVNNGMAVRSEGRDRETSLNLIRPV 307
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +3
Query: 264 KAFMLKKWFHGVMSAKEAESLIMEK-GKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIR 440
K+ + W+ G M +AE ++ ++G+FLVR+S++ + LSVR V H IR
Sbjct: 117 KSIESQPWYFGKMRRIDAEKCLLHTLNEHGAFLVRDSESRQHDLSLSVRENDSVKHYRIR 176
Query: 441 R-QHNKYDVGSGEQFDDLVGLIEHFR 515
+ H Y + F L LI H++
Sbjct: 177 QLDHGGYFIARRRPFATLHDLIAHYQ 202
>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
protein T01E8.3 protein.
Length = 1299
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIME-KGK-NGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRR--- 443
++WFHG EA+ I+E K K NG F++R+S G++ LS+ G+V HV IR
Sbjct: 552 EEWFHGRCERDEAKKRILEHKEKGNGLFMIRDSNLFIGDFSLSILHDGKVHHVRIRSKII 611
Query: 444 -QHNKYDVGSGEQFDDLVGLIEHF 512
+ KY + D L L+ ++
Sbjct: 612 DKEKKYYFMDNKVCDTLYELVSYY 635
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDV 464
WF ++AE L+ ++G+FL+R S YVLS++V G H ++R + V
Sbjct: 664 WFSATADKEKAEELLSLVPEDGAFLIRTSSTDSSVYVLSLKVDGEFWHYRLKRDGRIFVV 723
Query: 465 GSGEQFDDLVGLIEHF 512
+ F++L ++E +
Sbjct: 724 NQ-KVFENLNQIVEFY 738
>Z71262-1|CAA95813.1| 418|Caenorhabditis elegans Hypothetical
protein F22D6.1 protein.
Length = 418
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +3
Query: 282 KWFHGVMSAKEAESLIMEKGKNGSFLVRESQAH-PGEYVLSVRVRGRVSHVLIRRQ--HN 452
+WFHGV+ ++A+ L++ K GSFL+R S+ H +LSVR G++ ++ + N
Sbjct: 29 EWFHGVLQRQDADELLV---KPGSFLLRASEVHGKMSMILSVRHDGKLHNIAVNSDTGEN 85
Query: 453 KYDVGSGEQFDDLVGLIEHFRSYPMIETSGDVLR 554
+ G E+ D + S P+ +TSG L+
Sbjct: 86 FWFEGHREKSIDQLVQWHMTTSTPITKTSGVKLK 119
>L07143-2|AAB37087.3| 437|Caenorhabditis elegans Protein kinase
protein 31 protein.
Length = 437
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGE---YVLSVRVRGR------VSHVLI 437
+FHG++ ++ L+ NG ++VR S PGE Y+LSV + V H +I
Sbjct: 20 YFHGLIQREDVFQLL---DNNGDYVVRLSDPKPGEPRSYILSVMFNNKLDENSSVKHFVI 76
Query: 438 RRQHNKYDVGSGEQFDDLVGLIEHFR 515
NKY V + F+ + ++ H++
Sbjct: 77 NSVENKYFVNNNMSFNTIQQMLSHYQ 102
>Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVR-GRVSHVLIRRQHNKYD 461
WFHG++S ++E L+ K GSFLVR S+ G Y +S R G H L+ + Y
Sbjct: 395 WFHGIISRDQSEVLLTHK-PTGSFLVRVSERIWG-YTVSYASRDGSFKHFLVEKIKEGYQ 452
Query: 462 -VGSGE-QFDDLVGLIEH 509
+G+ + D+L L+ +
Sbjct: 453 FLGTNQVVHDELFDLVAY 470
>Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVR-GRVSHVLIRRQHNKYD 461
WFHG++S ++E L+ K GSFLVR S+ G Y +S R G H L+ + Y
Sbjct: 395 WFHGIISRDQSEVLLTHK-PTGSFLVRVSERIWG-YTVSYASRDGSFKHFLVEKIKEGYQ 452
Query: 462 -VGSGE-QFDDLVGLIEH 509
+G+ + D+L L+ +
Sbjct: 453 FLGTNQVVHDELFDLVAY 470
>Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGE---YVLSVRVR--GRVSHVLIRRQH 449
W+HG++ ++ + L+ ++ G FLVR + GE +VLSV V + H +IR +
Sbjct: 16 WYHGLLPREDMKQLLTQR---GDFLVRFTDPKVGEPRKFVLSVYVGVIEDIRHYVIREHN 72
Query: 450 NKYDVGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPV 569
NK+ V + F + L+ ++ G +++P+
Sbjct: 73 NKFAVDK-KWFSSIADLLNYYHRSKEPVAGGPETVIIRPI 111
>Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGE---YVLSVRVR--GRVSHVLIRRQH 449
W+HG++ ++ + L+ ++ G FLVR + GE +VLSV V + H +IR +
Sbjct: 16 WYHGLLPREDMKQLLTQR---GDFLVRFTDPKVGEPRKFVLSVYVGVIEDIRHYVIREHN 72
Query: 450 NKYDVGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLLQPV 569
NK+ V + F + L+ ++ G +++P+
Sbjct: 73 NKFAVDK-KWFSSIADLLNYYHRSKEPVAGGPETVIIRPI 111
>AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein.
Length = 533
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKG-KNGSFLVRESQAHPGEYVLSVRVR------GRVSHVLI 437
++W+ G + AE L++ G+FL+RE +A E+ L++R G V H I
Sbjct: 136 EEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKI 195
Query: 438 RR-QHNK-YDVGSGEQFDDLVGLIEHFRSYP 524
+R H++ Y + + F L L+ ++ P
Sbjct: 196 KRLDHDQGYFITTRRTFRSLQELVRYYSDVP 226
>AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyrosine
kinase protein.
Length = 533
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKG-KNGSFLVRESQAHPGEYVLSVRVR------GRVSHVLI 437
++W+ G + AE L++ G+FL+RE +A E+ L++R G V H I
Sbjct: 136 EEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKI 195
Query: 438 RR-QHNK-YDVGSGEQFDDLVGLIEHFRSYP 524
+R H++ Y + + F L L+ ++ P
Sbjct: 196 KRLDHDQGYFITTRRTFRSLQELVRYYSDVP 226
>AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene
related protein 1 protein.
Length = 533
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKG-KNGSFLVRESQAHPGEYVLSVRVR------GRVSHVLI 437
++W+ G + AE L++ G+FL+RE +A E+ L++R G V H I
Sbjct: 136 EEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKI 195
Query: 438 RR-QHNK-YDVGSGEQFDDLVGLIEHFRSYP 524
+R H++ Y + + F L L+ ++ P
Sbjct: 196 KRLDHDQGYFITTRRTFRSLQELVRYYSDVP 226
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 35.5 bits (78), Expect = 0.039
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 342 KNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDVGSGEQFDDLVGLIEHFRSY 521
++G FL+R S +H + VLSV RVSH LI + + + + + S+
Sbjct: 365 QDGIFLIRGSSSHGDKLVLSVLHGERVSHCLIEQNEEGWGFEHSNVYLTTISDFVRYYSH 424
Query: 522 PMIETSGDVLR 554
+ET D ++
Sbjct: 425 FSLETHADAIK 435
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 35.5 bits (78), Expect = 0.039
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 342 KNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNKYDVGSGEQFDDLVGLIEHFRSY 521
++G FL+R S +H + VLSV RVSH LI + + + + + S+
Sbjct: 365 QDGIFLIRGSSSHGDKLVLSVLHGERVSHCLIEQNEEGWGFEHSNVYLTTISDFVRYYSH 424
Query: 522 PMIETSGDVLR 554
+ET D ++
Sbjct: 425 FSLETHADAIK 435
>Z68299-1|CAA92609.1| 390|Caenorhabditis elegans Hypothetical
protein T04B2.2 protein.
Length = 390
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +3
Query: 282 KWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRVR 413
+++HG++ ++AE + + G FLVR+++ PG+ VL++ VR
Sbjct: 22 EYYHGMVPRQDAEGFLK---REGDFLVRKTEQMPGKVVLAMSVR 62
>AL032626-4|CAA21524.1| 227|Caenorhabditis elegans Hypothetical
protein Y37D8A.4 protein.
Length = 227
Score = 35.1 bits (77), Expect = 0.052
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKG-KNGSFLVRESQAHPGEYVLSVRVRGRVSHVLIRRQHNK 455
+ WF + K AE ++M G + SFL+ + +YVLS+ + +V H++IR K
Sbjct: 118 QSWFFVDVDPKSAERILMSNGFSDSSFLISFFRQ---KYVLSIWRKTKVEHLVIRNYQKK 174
Query: 456 -----YDVGSGEQFDDLVGLIEHF 512
+ + F +LV L E++
Sbjct: 175 NGTMAFQLDIDRSFKNLVELTEYY 198
>AF106583-4|AAD03135.1| 417|Caenorhabditis elegans Hypothetical
protein F23C8.7 protein.
Length = 417
Score = 35.1 bits (77), Expect = 0.052
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGE---YVLSVRVR-----GRVSHVLIR 440
W+HG++ ++ ++++ KNG FLVR ++ GE YVLS V H ++R
Sbjct: 11 WYHGLLPREDIKAMLR---KNGDFLVRSTEPKAGEPRQYVLSAMQSEELEDAGVKHYVMR 67
Query: 441 RQHNKYDVGSGEQFDDLVGLIEHFRS 518
+ + F+ + L+ ++ S
Sbjct: 68 LNSSNQIFLEAKGFETIASLVNYYMS 93
>AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical
protein BE0003N10.2 protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 288 FHGVMSAKEAESLIMEKGKNGSFLVRES 371
FHG++ EAE +++E G+ GS+LVRES
Sbjct: 51 FHGLIDRNEAEKMLLEAGE-GSYLVRES 77
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +3
Query: 204 SVLAVPAAGAIVSTVLKELSKAFMLK--KWFHGVMSAKEAESLIMEKGKNGSFLVRESQA 377
S+ A AG + L+E+ + +LK W+HG+M + E L+ + ++LVR +
Sbjct: 47 SIGASQVAGNYETEKLEEMYISHVLKFYPWYHGMMFGQTVEKLLK---WDYAYLVRRAMQ 103
Query: 378 HPGEYV--LSVRVRGRVSHVLIRRQHNKYDVG 467
+ V LSV++ G++ H + + + G
Sbjct: 104 RNSKKVLCLSVKIDGKICHFTLNSNKDGWSCG 135
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 255 ELSKAFMLKK-WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYV-LSVRVRGRVSH 428
E K+F+L++ W+HG+M K AE L+ + S++VR S +++ ++ RV + H
Sbjct: 61 EYIKSFLLQRNWYHGMMFGKAAEKLLKWE---SSYIVRRSMGPTHKFLCITARVEDKYFH 117
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 255 ELSKAFMLKK-WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYV-LSVRVRGRVSH 428
E K+F+L++ W+HG+M K AE L+ + S++VR S +++ ++ RV + H
Sbjct: 61 EYIKSFLLQRNWYHGMMFGKAAEKLLKWE---SSYIVRRSMGPTHKFLCITARVEDKYFH 117
>U41013-3|AAA82302.1| 433|Caenorhabditis elegans Protein kinase
protein 26 protein.
Length = 433
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = +3
Query: 255 ELSKAFMLKK-WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGE---YVLSVRVRGRV 422
E+S A + K+ ++HG++ +++ L+ NG FL+R S+ PG ++LSV R+
Sbjct: 9 EVSNATIDKELYYHGLLPSEDVRQLL---SNNGDFLLRSSEPEPGSPRTHILSVMFNNRL 65
Query: 423 SHV 431
+
Sbjct: 66 DDI 68
>U61958-1|AAB03183.1| 416|Caenorhabditis elegans Hypothetical
protein C25A8.5 protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGE---YVLSVRVR-----GRVSHVLIR 440
W+HG++ ++ ++++ KNG FLVR ++ GE YVLS V H ++R
Sbjct: 11 WYHGLLPREDIKAMLR---KNGDFLVRSTEPKAGEPRQYVLSAMQSEELEDAGVKHYVMR 67
Query: 441 RQHNKYDVGSGEQFDDLVGLIEHF 512
+ + F+ + L+ ++
Sbjct: 68 LNPSNQIFLEAKGFETIASLVNYY 91
>U80450-10|AAB37834.1| 417|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform b protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRV 410
K W+ +S ++A +++ +K G+F+VR+S + PG + L+++V
Sbjct: 144 KYWYKPTISREQAINMLRDKPP-GTFVVRDSNSFPGAFGLALKV 186
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRV 410
K W+ +S ++A +++ +K G+F+VR+S + PG + L+++V
Sbjct: 839 KYWYKPTISREQAINMLRDKPP-GTFVVRDSNSFPGAFGLALKV 881
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = +3
Query: 279 KKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYVLSVRV 410
K W+ +S ++A +++ +K G+F+VR+S + PG + L+++V
Sbjct: 676 KYWYKPTISREQAINMLRDKPP-GTFVVRDSNSFPGAFGLALKV 718
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 285 WFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPG-EYVLSVRVRGRVSHVLIRRQHNK 455
++HG M E E+++ +G FL+R ++ YV+S++ + + HVL++R K
Sbjct: 114 FYHGFMGRNECEAML---SNHGDFLIRMTEIGKRVAYVISIKWKYQNIHVLVKRTKTK 168
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 258 LSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVRESQAHPGEYV--LSVRVRGRVSHV 431
+S W+HG+M + E L+ + ++LVR + + V LSV++ G++ H
Sbjct: 3 ISHVLKFYPWYHGMMFGQTVEKLLK---WDYAYLVRRAMQRNSKKVLCLSVKIDGKICHF 59
Query: 432 LIRRQHNKYDVG 467
+ + + G
Sbjct: 60 TLNSNKDGWSCG 71
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical protein
E03G2.2 protein.
Length = 1503
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +3
Query: 300 MSAKEAESLIMEKGKNGSFLVRESQA----HPGEYVLSVRVRGRVSHVL 434
+S K+++S I+EK K + + +E A +PG Y+L + G V++VL
Sbjct: 897 ISRKKSKSSIVEKKKPDALITKEEAAIGRVNPGVYLLYFKAMGIVTYVL 945
>Z82086-5|CAB04992.2| 325|Caenorhabditis elegans Hypothetical
protein ZK228.5 protein.
Length = 325
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 635 IFYSLHLLYFLVDVVSS*SGATNRLQETQYVS*CL 531
+F+ + + +FL VS S ATNRLQ+ +V+ C+
Sbjct: 209 LFFVIRISWFLYHTVSQ-SQATNRLQKQFFVALCI 242
>Z82086-3|CAB04997.1| 325|Caenorhabditis elegans Hypothetical
protein ZK228.6 protein.
Length = 325
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -3
Query: 659 GITFHFLS---IFYSLHLLYFLVDVVSS*SGATNRLQETQYVS*CL 531
G+ F FL IF+ + ++L VS S ATNRLQ+ +V+ C+
Sbjct: 199 GLMFVFLFPQVIFFVFQISWYLYHTVSQ-SQATNRLQKQFFVALCI 243
>AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical
protein F25G6.9 protein.
Length = 1373
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 358 KNEPFFPFSMMRLSASLADIT-PWNHFLSMKALLNSLRTVETIAPAA 221
KNEP+F + + LSAS+ +T P N + LL S +E + PA+
Sbjct: 661 KNEPWFWSASLSLSASILQLTGPTNRAQASVRLLQS--CLENVVPAS 705
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 252 KELSKAFMLKKWFHGVMSAKEAESLIMEKGKNGSFLVR 365
KE + + + WF G+++ EAE + + ++G FLVR
Sbjct: 73 KERKRRYFRQDWFWGMITQTEAEGHLKD-CRHGEFLVR 109
>AL132876-1|CAB60842.2| 132|Caenorhabditis elegans Hypothetical
protein Y105E8A.1 protein.
Length = 132
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 483 DDLVGLIEHFRSYPMIETSGDVLRLLQPVSGTRLRAHDIDQKVQEMQGIEDRQKMECN 656
D+ +G E F + +T + LRLL G R+R +D ++ V + ++CN
Sbjct: 74 DEYLGDYEDFDTSVEADTITEFLRLLPDAIGNRIRVNDANKCVAALFSKTQGAGVKCN 131
>AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical
protein W02H5.8 protein.
Length = 578
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 381 PGEYVLSVRVRGRVSHVLIRRQHNKYDVGSGEQFDDLVGLIEHFRSYPMIETSGDVLRLL 560
PG++ R+ H L+ +K ++ GE+F LV + M +G+VLR
Sbjct: 222 PGKFRAQFGSANRIVHSLLDTLRSKMEMREGEKFVVLVNNLGSVSQLEMNIVNGEVLRYF 281
Query: 561 Q 563
+
Sbjct: 282 E 282
>Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical
protein ZK669.2 protein.
Length = 264
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 182 PVGLHGCLRARSPGCRCNRLHG 247
P GL C R+ G RCN HG
Sbjct: 114 PFGLASCRRSAETGIRCNCQHG 135
>AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical
protein F25E5.8a protein.
Length = 235
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1
Query: 658 VLHSIFCRSSIPCISCTFWSMS*ALSLVPLTGCKRRSTSPDVSIIGYERKCSIRPTR 488
+LH+ F ++ PCIS S S L + +R+TS D E+KCS+ R
Sbjct: 179 ILHAHFIKNQSPCISRVVSSSSLKEKLHKI----KRTTSSDSDTDFPEKKCSVASYR 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,768,928
Number of Sequences: 27780
Number of extensions: 361503
Number of successful extensions: 1257
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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