SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_F15
         (870 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.77 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.4  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   7.2  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 218 PGSPLTGRAKVFWSCVATSEAEPRATSAVH 129
           P  P T RAK++  CV T+   P A S ++
Sbjct: 21  PSRPKT-RAKIYALCVVTALVTPSALSIIY 49


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +3

Query: 570 QEGERAPAARGRLQGEAHVR--LLRGEAASGLPAREVERGAPSRPXAHGRLDSEQRDQGH 743
           +E ERAPA   R  G+A       R + A G P  +  R A ++      +   Q   G 
Sbjct: 271 EEAERAPAPAVRAAGDAAAARGAARADGAGG-PLHD-HRPALAQQRRVAAVQVPQLAGGG 328

Query: 744 HSGPGEAGS 770
             GPG A S
Sbjct: 329 RRGPGPARS 337


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 733 SRCSLSSRPCAXGRDGAPRST 671
           S C  S+ P +  R G PRST
Sbjct: 929 SPCRNSASPASSDRSGTPRST 949


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 496 ALEDAIEGEKTEQWRAQGQELLIQAKK 576
           AL + +  E T  WR   Q +L+Q ++
Sbjct: 541 ALGEVLWSEPTNTWREAEQRILVQRER 567


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
 Frame = +1

Query: 358 YYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQW 537
           Y SGL+   +     +K+   +  W   EV      W  G N+ +  L          ++
Sbjct: 109 YCSGLASGYLYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNVLLAVFMSLALIEY 168

Query: 538 RAQGQELLIQAKKENVLLQLEAAYRERLMY-----AYSEVKRRLDYQLEKSNVERRLAXK 702
                 +L+Q  K  + L+   +  E   Y     +YS +   +DY +  + V + +  +
Sbjct: 169 ------ILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQ 222

Query: 703 HMVDWIVSNV 732
           H   W+ ++V
Sbjct: 223 HTFIWVFNDV 232


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
 Frame = +1

Query: 358 YYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQW 537
           Y SGL+   +     +K+   +  W   EV      W  G N+ +  L          ++
Sbjct: 109 YCSGLASGYLYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNVLLAVFMSLALIEY 168

Query: 538 RAQGQELLIQAKKENVLLQLEAAYRERLMY-----AYSEVKRRLDYQLEKSNVERRLAXK 702
                 +L+Q  K  + L+   +  E   Y     +YS +   +DY +  + V + +  +
Sbjct: 169 ------ILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQ 222

Query: 703 HMVDWIVSNV 732
           H   W+ ++V
Sbjct: 223 HTFIWVFNDV 232


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
 Frame = +1

Query: 358 YYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQW 537
           Y SGL+   +     +K+   +  W   EV      W  G N+ +  L          ++
Sbjct: 109 YCSGLASGYLYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNVLLAVFMSLALIEY 168

Query: 538 RAQGQELLIQAKKENVLLQLEAAYRERLMY-----AYSEVKRRLDYQLEKSNVERRLAXK 702
                 +L+Q  K  + L+   +  E   Y     +YS +   +DY +  + V + +  +
Sbjct: 169 ------ILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQ 222

Query: 703 HMVDWIVSNV 732
           H   W+ ++V
Sbjct: 223 HTFIWVFNDV 232


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 646 RRLDYQLEKSNVERRLAXKHMVD 714
           RRL+  LEKS +      +H VD
Sbjct: 148 RRLEMSLEKSGLFSSKTSEHSVD 170


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 439 CPTKRPTLVRISREL 395
           CP  RPT   +S+ L
Sbjct: 734 CPKNRPTFTELSKSL 748


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,001
Number of Sequences: 336
Number of extensions: 4259
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -