Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E23
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    25   0.50 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.7  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 94  HNGPQNGFESNGPISSI 144
           +N P NG  S+GP SSI
Sbjct: 75  NNVPSNGLSSSGPFSSI 91


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +2

Query: 563 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAG 706
           S   +  LLS  + L   T KS       V +S  +H T S    TAG
Sbjct: 221 SLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASFGLHATGSAPSPTAG 268


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 401 GASVILIQYHIXYPLFLYHT 342
           G  ++L QY++   + L+HT
Sbjct: 189 GIGIMLAQYYLQADMLLWHT 208


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 401 GASVILIQYHIXYPLFLYHT 342
           G  ++L QY++   + L+HT
Sbjct: 189 GIGIMLAQYYLQADMLLWHT 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,733
Number of Sequences: 336
Number of extensions: 3462
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)