Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_E23
(766 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 38 0.012
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 36 0.036
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 36 0.036
SB_57061| Best HMM Match : Sec62 (HMM E-Value=0.27) 35 0.062
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 34 0.14
SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 33 0.33
SB_23026| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18) 32 0.58
SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 31 1.0
SB_49522| Best HMM Match : WXG100 (HMM E-Value=9.4) 31 1.0
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 31 1.0
SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014) 30 2.3
SB_29754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 29 3.1
SB_4487| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_27931| Best HMM Match : Filament (HMM E-Value=0.028) 29 4.1
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 29 5.4
SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21) 28 7.2
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 28 7.2
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 28 9.5
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_51986| Best HMM Match : HLH (HMM E-Value=0.15) 28 9.5
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +2
Query: 461 EKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTL 640
E A+++ + + NE K +M+K G++K S EQ+ + +++D ++ Q
Sbjct: 2485 ETAEKDLVEANAKNEDLEAAVEKARMEKAGVLKEISAKEEQIQRMEAKMSDLEEEKQKFT 2544
Query: 641 DNLVSSSSTVHGTQSELENTAGTITQSSKLLKEI 742
+ L S+ V Q LE+ ++Q K L+ +
Sbjct: 2545 NELYLSTRKVLSLQLNLESLRNEVSQLGKELRRL 2578
Score = 31.1 bits (67), Expect = 1.0
Identities = 39/224 (17%), Positives = 91/224 (40%), Gaps = 5/224 (2%)
Frame = +2
Query: 83 RKYTTMALKMDLSPTDPYHQSLFAKLENPDVVYXNFVKRLAKYHFQVKAIIQDILXCRES 262
+K L+ ++S + + L K++ D N + ++K + + +
Sbjct: 2890 QKRNIQELQRNVSKLEEENAVLEEKVKLLDEASSNLKNQTEVQTVELKRLRDSLTDAKNQ 2949
Query: 263 MEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELE-SQRHLLACLLKEFXDAN 439
+ N E + + EEL + K+ DT + E S L + +A
Sbjct: 2950 LTTSNNNYEGSERERKRLMEELIHSEEQVKKLQDTCNELLHEKSVASDKVLALNDTLEAT 3009
Query: 440 INSMFAIEKAQREDLLXCSDN---EKSSV-RQRKKKMDKDGLVKMSSGVTEQLLSVSRQL 607
+ S + + +++L+ + + +S++ R +K++ + +K + +++
Sbjct: 3010 VLSSEQMANSLKQELMTTNKDLAITRSTLERSQKREEELQEDIKQMEDKIAIIEEKKQEM 3069
Query: 608 ADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLLKE 739
+ KSQN L S+ ++ +L+N ITQ ++ L+E
Sbjct: 3070 VEKFWKSQNDLSEAESTIDSLRSENKDLKNKCALITQRAERLEE 3113
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 37.5 bits (83), Expect = 0.012
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Frame = +2
Query: 254 RESMEKLNELNEKGRAKITEVREELENLYLYGKETGDT-XYDTELESQR-HLLACLLKEF 427
+ S+++LNE NE + + EEL + ET D ++T Q+ LA L+E
Sbjct: 656 KNSVKQLNEKNETLQNDLASRMEELGEVKRKLSETTDALQHETSAAEQKLASLAAKLEEA 715
Query: 428 XDANINSMFAIEK--AQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSR 601
AN IE+ ++ L+ + ++ V+Q K+ ++ V T Q +S
Sbjct: 716 FVANSAKTKEIEELTSRVNQLIETKETSEAHVQQLKENLENGQEVLKRKDTTIQ--EISS 773
Query: 602 QLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLLK 736
L + K + SS+++ + ++E+ +I + +K
Sbjct: 774 ALKEAENKLSGVEKQMAEKSSSINALELKVEDLEASIQEQLVCIK 818
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/66 (24%), Positives = 36/66 (54%)
Frame = +2
Query: 191 VKRLAKYHFQVKAIIQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTX 370
V+ + K F++++I+Q+I C ++ L+ELN + + I ++ +++ + TG
Sbjct: 17 VRDIVKLEFEIQSIVQEIRGCDGPLKVLDELNSRAKRTIKSLKGKIQEKGSHSLNTGHIL 76
Query: 371 YDTELE 388
TE +
Sbjct: 77 LRTETD 82
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 36.3 bits (80), Expect = 0.027
Identities = 35/164 (21%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Frame = +2
Query: 254 RESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQRHLLACLLKEFXD 433
+E++ +L + E+ RA ++ EN K+ D YD E++ + + A L+E +
Sbjct: 1168 KETLHELTKTQEELRAASSKAATGYENTISEIKKEKDMLYD-EVKHLKDIRAQQLEEIEE 1226
Query: 434 AN--INSMFAIEKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQL 607
I M ++ +++L D+ ++ KK+M ++ + E L +L
Sbjct: 1227 LKRQIEHMRDVQNNYQKEL-EAKDDSLHYLQDSKKEMMRE-----LEDLKEMLHKKENEL 1280
Query: 608 ADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLLKE 739
A+ ++ + N + ++ T ++LEN GT+ +S + L +
Sbjct: 1281 AEQAERIRVFESNNYGDAKELYETCNKLENEIGTLRESREELSK 1324
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 35.9 bits (79), Expect = 0.036
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Frame = +2
Query: 200 LAKYHFQVKAIIQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDT 379
+ KY Q+ + + + R+++E+ L + +I ++RE+L + YG +
Sbjct: 85 IEKYKQQITGLNEKEVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYG-----NIHAE 139
Query: 380 ELESQRHLLACLLKEFXDAN--INSMFAIEKAQREDLLXCSDNEKSSVRQRKK------- 532
EL+ R+ L E D N +N+ K ++ + + EK RQ ++
Sbjct: 140 ELQRIRNELEKCKNEISDLNSKLNTKSQKLKTYKKHIGELQEREKDLDRQLQEALAAKNR 199
Query: 533 -KMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGT 709
M DGL G ++L Q+ + ++++ ++ L + + ELE+T
Sbjct: 200 INMQLDGLEGDWQGEMDRLNDSIIQMTEAQTQNEDKINKLEMKNKQLSQQNKELEDTKRQ 259
Query: 710 IT-QSSKLLKE 739
++ Q +L+ E
Sbjct: 260 LSHQIQQLINE 270
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 35.9 bits (79), Expect = 0.036
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Frame = +2
Query: 200 LAKYHFQVKAIIQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDT 379
+ KY Q+ + + + R+++E+ L + +I ++RE+L + YG +
Sbjct: 85 IEKYKQQITGLNEKEVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYG-----NIHAE 139
Query: 380 ELESQRHLLACLLKEFXDAN--INSMFAIEKAQREDLLXCSDNEKSSVRQRKK------- 532
EL+ R+ L E D N +N+ K ++ + + EK RQ ++
Sbjct: 140 ELQRIRNELEKCKNEISDLNSKLNTKSQKLKTYKKHIGELQEREKDLDRQLQEALAAKNR 199
Query: 533 -KMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGT 709
M DGL G ++L Q+ + ++++ ++ L + + ELE+T
Sbjct: 200 INMQLDGLEGDWQGEMDRLNDSIIQMTEAQTQNEDKINKLEMKNKQLSQQNKELEDTKRQ 259
Query: 710 IT-QSSKLLKE 739
++ Q +L+ E
Sbjct: 260 LSHQIQQLINE 270
>SB_57061| Best HMM Match : Sec62 (HMM E-Value=0.27)
Length = 243
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 236 QDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQR 397
+++ CR +EK E EK RA + ++ LE L KE D + ELE+ R
Sbjct: 183 EELAACRSELEKAKEEIEKARASYDKEKDRLEKLI---KEMTDELQEKELENDR 233
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 33.9 bits (74), Expect = 0.14
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Frame = +2
Query: 236 QDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQRHLLACL 415
+++ C+ +EK E EK A + ++ LE + + D + ELE+ R +
Sbjct: 751 EELAACKSELEKAKEEIEKAWALYDKEKDRLEKI---NWQMTDELQEKELENDRQYQKIV 807
Query: 416 -LKEFXDANINSMFAIEKAQR--EDLLXC-SDNEKSSVRQRKK----KMDKDGLVKMSSG 571
LK+ + S+ ++ Q E+L C S+ EK+ K +KD L K++
Sbjct: 808 DLKDELKSLTASLEERKQNQNGSEELATCRSELEKAKGEIEKAWTLYDKEKDRLEKLNGQ 867
Query: 572 VTEQLLSVSRQLADTTQKSQN 634
+ ++L S++ L + ++S+N
Sbjct: 868 LIDELKSLTSVLDEMKKESEN 888
>SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 808
Score = 32.7 bits (71), Expect = 0.33
Identities = 33/165 (20%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Frame = +2
Query: 260 SMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQRHLLACLLKEFXDAN 439
+ME+ N+ EK + + +++E Y + D + EL++ + L + F
Sbjct: 527 AMERKNKALEKSVNGLEKEIKKMEQNYELKSKESDEKFHRELQNTKDRLQKDFQSFHQRT 586
Query: 440 INSMFAIE------KAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSR 601
+ +++ + +R L +S + K K D+D L+ + + ++ L SR
Sbjct: 587 SENSQSMQDRILKLEEERNSLEVEVSRLRSELVSSKLKADED-LMNAKTKLKQEELVRSR 645
Query: 602 QLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLLK 736
Q + Q + + L S+ SEL++ IT+ +++ K
Sbjct: 646 QYDERIHLLQTSFEELQLQSTKQQSKISELQSQLSAITRENEINK 690
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 32.7 bits (71), Expect = 0.33
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Frame = +2
Query: 254 RESMEKLNELNEKGRAKITEVRE-ELENLYLYGKETGDTXYDTEL---ESQRHLLACLL- 418
++ +EK + EK E RE E + L KE + + E E +R L L
Sbjct: 928 QQQLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKEAERAKKEKERLLQEDKLH 987
Query: 419 -KEFXDANINSMFAIEKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSV 595
KE D +EK +RE +K S+++ KK+ D D K+ EQ + +
Sbjct: 988 EKEEKDRKDKEKRKVEKEKREKDKQVEKEKKDSLKRVKKRKDSDKERKVKEKEEEQKVKI 1047
Query: 596 SRQLADTTQKSQNTLD-NLVSSSSTVHGTQSELENTAGTIT 715
++ T+ + N S ST +SEL AG+++
Sbjct: 1048 EKEPNKVTEVQLMVEETNKEESPSTDRDAESELPK-AGSVS 1087
>SB_23026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.7 bits (71), Expect = 0.33
Identities = 35/150 (23%), Positives = 60/150 (40%)
Frame = +2
Query: 269 KLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQRHLLACLLKEFXDANINS 448
+L + + G + I + + +L Y K T D LES KE
Sbjct: 14 ELQNVAQSGDSSIVIIESQSNDLEHY-KATQDKLKKA-LESYELDCQAKNKEITSLRATV 71
Query: 449 MFAIEKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKS 628
E Q + + + E + K+ K+ K S+ + E LL+V + T+K+
Sbjct: 72 ETMEELQQDKHRIEAINRELQEALDHEAKLRKESEEKHSNAIKELLLAVK----EATEKA 127
Query: 629 QNTLDNLVSSSSTVHGTQSELENTAGTITQ 718
+ +LVS S+ T EL T+ +T+
Sbjct: 128 TSAQQDLVSEHSSDQVTTVELTRTSAHVTR 157
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 31.9 bits (69), Expect = 0.58
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Frame = +2
Query: 272 LNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQRHL-LACLLKEFXDANINS 448
+ +LN++ AK+ V E L L K+ + +L + H+ +E D N
Sbjct: 1904 IEKLNKEHEAKLESV-ERLYKAKLDEKDFDHSSQVKQLLKEFHIKYGEKERELQDTVSN- 1961
Query: 449 MFAIEKAQREDLLXCSDNEKSSVRQRKK-KMDKDGLVKMSSGVTEQLLSVSRQLADTTQK 625
AIE +QRE+ E+ RK+ KM +D ++ +T+Q + S Q+ + +K
Sbjct: 1962 --AIEASQREENKLVDKYEEEIREYRKELKMREDEMLDYKR-ITDQKVQESEQMVEELKK 2018
Query: 626 SQNTLDNLVSSSSTVHGTQSEL 691
D L+++ + H E+
Sbjct: 2019 QHE--DALLAAEADYHSKMEEM 2038
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 31.9 bits (69), Expect = 0.58
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Frame = +2
Query: 194 KRLAKYHFQVKAIIQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXY 373
K+L K IQ + + E+L+ + K ++ + LE++ K T
Sbjct: 515 KKLVSEINDFKVNIQKLESLKGEKEELDNAHSKIIEMYSDASDRLESVTQ--KHANATKQ 572
Query: 374 DTELESQRHLLACLLKEFXDANINSMFAIEKAQREDLLXCSDNEKSSVRQR----KKKMD 541
L ++ L KE ++ + ++ A++E NE + +R++ K+++
Sbjct: 573 LQSLTEEKKTLQNSCKELKESLSLAKKELDSAKKES--AARSNEVNLLRKKHEDEKRRLI 630
Query: 542 --KDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTIT 715
KDG K + + E+L VS++++ + +T DN+ + V L+ +
Sbjct: 631 GLKDGGDKELNRLKEELTQVSKKVSSAVSEMSDTPDNVSNQVEKVVNELKSLKKKHEELE 690
Query: 716 QSSK 727
SSK
Sbjct: 691 NSSK 694
>SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18)
Length = 808
Score = 31.9 bits (69), Expect = 0.58
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
Frame = +2
Query: 230 IIQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQRHLLA 409
I++ + + S++K EL EK RAK ++ + L+ L KE +TE Q+ A
Sbjct: 22 IVEFLCFKQRSLQKDKEL-EKERAKRKDLEQRLKKLQSKEKELNSIREETE---QKLREA 77
Query: 410 CLLKEFXDANINSMFAIEKAQREDL---LXCSDNEKSSVRQRKKKMDKDGLVKMSSGV-- 574
+ N+ K + EDL L S +S++ + ++ K ++ V
Sbjct: 78 NNESQQVSENLKQAHKWFKTKFEDLQAELARSKKIQSALERENREQQKKLRLEKKQAVNE 137
Query: 575 TEQLLSVSRQLADTTQK-SQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLLKEI 742
TE+ + R T K + + +NL + H Q+E + A T T + L+EI
Sbjct: 138 TEKAKEILRTSRLTLNKLTGDVAENLWETKGMKHALQAEKDINAMT-THKLQRLQEI 193
>SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 31.9 bits (69), Expect = 0.58
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 3/184 (1%)
Frame = +2
Query: 155 KLENPDVVYXNFV-KRLAKYHFQVKAIIQDILXCRESMEKLNELNEKGRAKITEVREELE 331
K E DV+ F+ K +A Y I DI+ E +EK EL E +E EEL+
Sbjct: 338 KEEKGDVIPEIFLGKNIADY------IDPDIMKKLEELEKEEELREAAGVYESESEEELD 391
Query: 332 NLYLYGKETGDTXYDTELESQRHLLACLLKEFXDAN--INSMFAIEKAQREDLLXCSDNE 505
+ G+E + E+ +R L+ +E N I A+ KA+ +
Sbjct: 392 S---EGEEIKNKA--AEIREKRKLIVKQHRESKGTNRPIIPRKALAKAE-----TARNKR 441
Query: 506 KSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQS 685
+ V KKMD D +T + S S+ A+ ++ NT S S V QS
Sbjct: 442 SAGVIDSDKKMDID--EDQDEPMTGRKRSRSQTPANAKRRRSNTASVTPRSQSRVPRDQS 499
Query: 686 ELEN 697
L N
Sbjct: 500 GLSN 503
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 31.1 bits (67), Expect = 1.0
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 5/164 (3%)
Frame = +2
Query: 194 KRLAKYHFQVKAIIQDILXCRESME-KLNELNEKGRAKITEVREELENLYLYGKETGDTX 370
KR + + + +++ C+ E K N+L +AKI + EEL +L G ET +T
Sbjct: 135 KRNEDINHEFQKLLRQKEECKSLYEHKFNKLKSGAKAKINRLEEELVSLRSPGGET-ETP 193
Query: 371 YDTELESQRHLLACLLKEFXDANINSM---FAIEKAQREDL-LXCSDNEKSSVRQRKKKM 538
+ + + LL E DA I S+ + + EDL + NE+ + + K+
Sbjct: 194 RPSGSPKKSFNIDKLLSE-KDAAIQSLTQQLQVSLKREEDLVIEGRQNEEKCMHEIALKI 252
Query: 539 DKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTV 670
+ +K+ +QL+ + L+S+ V
Sbjct: 253 TEIQNLKIKEEEGKQLVEERNKTVQELMDKMEAQKRLISNRDEV 296
>SB_49522| Best HMM Match : WXG100 (HMM E-Value=9.4)
Length = 161
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 554 VKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSS 724
++ S TEQ ++ S Q +TT++ NT + V++S T + NT +S
Sbjct: 7 LQQSIHTTEQSVNTSEQFINTTEQFVNTTEQFVNTSEEFVNTLQQFINTTEQFVNTS 63
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 575 TEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENT 700
TEQ + S Q +TT++ NT + V++S T + NT
Sbjct: 90 TEQFFNTSEQFVNTTEQFVNTSEQFVNTSEEFVKTSEQFVNT 131
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = +2
Query: 557 KMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLL 733
+ S +EQ ++ + Q +TT++ NT + V++ T + NT+ + S + +
Sbjct: 15 EQSVNTSEQFINTTEQFVNTTEQFVNTSEEFVNTLQQFINTTEQFVNTSLFVNTSEQFV 73
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 560 MSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSK 727
MSS V+EQL S+ + + TT++ + D L + + +Q E T ++ + K
Sbjct: 384 MSSMVSEQLASLMSEYSRTTERVDHLEDVLANKEEALRNSQDAHEQTVAKLSSAIK 439
>SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014)
Length = 323
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/63 (22%), Positives = 27/63 (42%)
Frame = +2
Query: 512 SVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSEL 691
S ++ K Q+ + + Q+ +T + QNT+ S++S T S+
Sbjct: 123 STEKQSTNSQKHNTNSQMQNTNSQMQNTNSQMQNTNSQMQNTISQKQSTNSQKQSTNSQK 182
Query: 692 ENT 700
+NT
Sbjct: 183 QNT 185
>SB_29754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 494 SDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVH 673
SD+ SVR K+ ++ GVTEQ+ V++Q+ TQ+ + + + ++
Sbjct: 3 SDDVIRSVRVLVKRPLITCSIEQIYGVTEQIYGVTQQIYGVTQQIYGVTEQIYGVTEQIY 62
Query: 674 GTQSELENTAGTITQSSKLLKEIRT*RIYG 763
G ++ I ++ + + T +IYG
Sbjct: 63 GVTEQIYGVTQQIYGVTQQIYGV-TEQIYG 91
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +2
Query: 548 GLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSK 727
G+ + GVTEQ+ V++Q+ TQ+ + + + ++G ++ I ++
Sbjct: 56 GVTEQIYGVTEQIYGVTQQIYGVTQQIYGVTEQIYGVTEQIYGVTEQIYGVTEQIYGVTE 115
Query: 728 LLKEIRT*RIYG 763
+ + T +IYG
Sbjct: 116 QIYGV-TEQIYG 126
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +2
Query: 548 GLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSK 727
G+ + GVTEQ+ V+ Q+ TQ+ + + ++G ++ I ++
Sbjct: 49 GVTEQIYGVTEQIYGVTEQIYGVTQQIYGVTQQIYGVTEQIYGVTEQIYGVTEQIYGVTE 108
Query: 728 LLKEIRT*RIYG 763
+ + T +IYG
Sbjct: 109 QIYGV-TEQIYG 119
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 29.9 bits (64), Expect = 2.3
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Frame = +2
Query: 200 LAKYHFQVKAIIQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDT 379
L K +++ + D+ R ++ + ++ ++ E+ L ET
Sbjct: 1078 LRKRRMELQEVTADLAEHRHELDAVISQCKRSEERMRRAEEDAGALETRASETSSGL--- 1134
Query: 380 ELESQRHLLACLLK-EFXDANINSMFAIEKAQREDLLXCSDNEKSSVRQRKKKMDKDGLV 556
+ + LL+ +K + + A ++++LL + E+S V+ RK D DG++
Sbjct: 1135 -IRAGNQLLSLDIKTRGMTEKLTQITAEVDLKKKELL---EAEQSLVKVRK---DSDGVM 1187
Query: 557 KMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTV 670
T +L S+ +LADT ++ L LVS V
Sbjct: 1188 TSVEERTRELKSLESRLADTEERLSLYLKELVSLKKQV 1225
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/72 (23%), Positives = 39/72 (54%)
Frame = +2
Query: 482 LLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSS 661
+L + K S Q+ + ++ + K+ +E L+S++RQL D +K Q+ + ++ +
Sbjct: 314 ILEKQNASKDSGNQKATSLGEEKIRKLKKRNSE-LVSIARQLEDKAKKLQDEKNAILKQA 372
Query: 662 STVHGTQSELEN 697
++ +ELE+
Sbjct: 373 NSKADNTAELEH 384
>SB_4487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 476 EDLLXCSDNEKSSVRQRKKKMDKDGLVKMSS 568
ED SD K+ ++QR+KKM + L KMS+
Sbjct: 117 EDNRKMSDRRKNHLKQRRKKMKQKRLQKMSA 147
>SB_27931| Best HMM Match : Filament (HMM E-Value=0.028)
Length = 428
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/145 (18%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Frame = +2
Query: 209 YHFQVKAIIQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELE 388
Y ++KA+ + + C++ +E NE + + + ++ L+ + ET EL+
Sbjct: 129 YDREIKALEKKLSRCKQELENNNERRLEAESAVQRLKNSLDKASNFSNET--KVKVEELK 186
Query: 389 SQRHLLACLLKEFXDANINSMFAIEKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSS 568
+ + L+ + E + E ++ + + + +++ QR MD+ +V+
Sbjct: 187 NDKQKLSKKVNELKE---------ELSREQQMRSSLEQSHTTLLQRVNDMDR--VVETER 235
Query: 569 GVTEQLLSVSRQL---ADTTQKSQN 634
G + L + ++L A TT++ N
Sbjct: 236 GDVQALAAECQELKREASTTKEEYN 260
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 28.7 bits (61), Expect = 5.4
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 4/180 (2%)
Frame = +2
Query: 218 QVKAIIQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQR 397
+ ++ ++D + ++ +L +K + E EN K+ T + LE++
Sbjct: 130 ETESRLEDFKNEVKKLQHTIKLKDKKIDGLESSLSETENTSFVQKDDRVTEFKCTLEARD 189
Query: 398 HLLACLLKEFXDANI--NSMFAIEKAQREDL--LXCSDNEKSSVRQRKKKMDKDGLVKMS 565
+ + L + D N + + Q E + L +E S+ K ++ + KM
Sbjct: 190 NRIVELENKLEDLESPNNKLHHSPQFQGEKISDLEGQIDELESLAAEKNRLSQSLEQKMK 249
Query: 566 SGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLLKEIR 745
+ +L + L TQ+ QN++D T+ SELE + S +LL++IR
Sbjct: 250 KIM--ELENRVEDLTCETQRLQNSVDQKAKRIQTLEDRISELEQ---LLASSQELLEDIR 304
>SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +2
Query: 434 ANINSMFAIEKAQREDLLXCSDN----EKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSR 601
A++N+ +K + +++ N ++++ Q + D K++SG+ QL S +
Sbjct: 673 ASVNASVTEKKGRNDNVFEFLSNLSAQGETNLGQNEDHSDTSSGAKITSGILSQLSSDTT 732
Query: 602 QLADTTQKSQNTLDNLVSSSSTVHGT 679
++DTT+ + + SS+ V T
Sbjct: 733 LISDTTEATMHDQSRDTSSAGYVPHT 758
>SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21)
Length = 570
Score = 28.3 bits (60), Expect = 7.2
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Frame = +2
Query: 260 SMEKLNELNEKGRAK---ITEVREELENLYLYGKETGDTXYDTELESQRHLLACL--LKE 424
+++K E + RAK I ++E+ L + G++ + + Q++L L +E
Sbjct: 351 ALKKAQEERDMRRAKDCEIARLKEDTSGL-MKGRDKVQHRLEKYIIYQQYLEKVLENAEE 409
Query: 425 FXDAN-INSMFAIEKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSR 601
F + I + + A +DLL E+ Q K + +K L+K + ++L+ +
Sbjct: 410 FQEIREIIARYDTLTATHQDLL-----ERELKNQEKYEKEKARLIKFTEEKNNEILNYNN 464
Query: 602 QLADTTQKSQNT 637
QLA+ K + T
Sbjct: 465 QLANLQTKLEKT 476
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 515 VRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELE 694
+R++KK + + L KM+S V LSV Q++ + + LD + S L+
Sbjct: 295 MREQKKSITSEELQKMASHVLLATLSVPIQVSLSNTEKYLELDEVAREKSKRLANLLNLQ 354
Query: 695 N--TAGTITQSSKLLKEIR 745
N T ++ Q L K+ R
Sbjct: 355 NTPTRESLLQDMLLEKDFR 373
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 461 EKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLAD-TTQKSQNT 637
E+A++ + ++ S +KK+ +K+G + GV E + D ++++S++
Sbjct: 516 EEAEKNETQSLFFFQQGSAEAKKKREEKEGKKRRKEGVKECKGEEEQNKTDSSSEESEDE 575
Query: 638 LDNLVSSSSTVHGTQSE 688
L+ SSS+ T +
Sbjct: 576 LETSDDSSSSESDTSDD 592
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 27.9 bits (59), Expect = 9.5
Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 5/206 (2%)
Frame = +2
Query: 140 QSLFAKLENPDVV---YXNFVKRLAKYHFQVKAIIQDILXCRESMEKLNELNEKGRAKIT 310
Q L K DV+ Y + + +Y QV+ + D + MEK E+ A +
Sbjct: 1150 QELIGKDSELDVIKDRYNAALSEIHEYDKQVRQLKADRSNSQYEMEKSRFYTEQLEADLK 1209
Query: 311 EVREELENLYLYGKETGDTXYDTELESQRHLLACLLKEFXDANINSMFAIEKAQREDLLX 490
+ RE++ + L+ + + L ++ DA N E A+R D +
Sbjct: 1210 KCREQI---------AANQEQMQSLQQELYTLKATAEDQRDALAN-----EVAERHDTIV 1255
Query: 491 CSDNEKSSVRQRKKKMDKDGLVKMS--SGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSS 664
NE S+ R ++ + S + ++ +S Q ++ + L +++
Sbjct: 1256 KLKNELGSLDTRYREATSSLTHRNSVIQRMRDESKDISEQAEESKHRQLELESKLNAANK 1315
Query: 665 TVHGTQSELENTAGTITQSSKLLKEI 742
+ + LE + +SS+ L +I
Sbjct: 1316 RISNLEERLEKKQMSSLESSEQLSQI 1341
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 27.9 bits (59), Expect = 9.5
Identities = 29/125 (23%), Positives = 50/125 (40%)
Frame = +2
Query: 233 IQDILXCRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTXYDTELESQRHLLAC 412
+Q L ME+L + NE+ R + E ++E + D ELE Q+
Sbjct: 1424 VQKELEAEMEMERLQKENEEERLRKEEEERKMEE---ERRRDEQARRDKELEDQKR---- 1476
Query: 413 LLKEFXDANINSMFAIEKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLS 592
K+ I E+ Q + L E+ V + KK++++ + E+ L
Sbjct: 1477 --KDEERRLIMEQQERERRQEMEYLQREKEERLRVEEALKKLEREKEEERQRLEREKELE 1534
Query: 593 VSRQL 607
+ RQL
Sbjct: 1535 IERQL 1539
>SB_51986| Best HMM Match : HLH (HMM E-Value=0.15)
Length = 2110
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +2
Query: 458 IEKAQREDLLXCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSR--QLADTTQKSQ 631
IEK+ +D L + EK +++KKK +D ++ + T L + ++AD +
Sbjct: 228 IEKSLLKDPLWQDEEEKGKRKKKKKKRKRDKSLQDQTCQTMFRLKKKKKFRVADNVE-MP 286
Query: 632 NTLDNLVSSSSTVHGTQSELENTAGTITQSSKL 730
NT+ + SS V + S N+ + ++ K+
Sbjct: 287 NTVSFPFTGSSGVSKSVSHATNSRSDLQRNKKI 319
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,694,001
Number of Sequences: 59808
Number of extensions: 389894
Number of successful extensions: 1449
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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