Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E23
         (766 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    31   0.052
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    28   0.27 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              26   1.1  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    24   4.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.9  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 30.7 bits (66), Expect = 0.052
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = +2

Query: 515 VRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELE 694
           +R  ++ +D++G    S+   +QL S S     + Q S ++L +  S SST +GT SE  
Sbjct: 160 IRSLQRMLDENGGELPSNKQQQQLTSAS----SSNQLSNSSLCSASSGSSTYYGTMSEPS 215

Query: 695 NTA 703
           N +
Sbjct: 216 NAS 218


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +2

Query: 461 EKAQREDLLXCSDNEKSSVRQRKKKMD--KDGLVKMSSGVTEQLLSVSRQLADTTQKSQN 634
           E+   +D L    N+K+ + +  KK++  K+  +K    + + + +    L +  +    
Sbjct: 409 EQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAE 468

Query: 635 TLDNLVSSSSTVHGTQSELEN 697
              ++ +S   +H  QSEL+N
Sbjct: 469 LSQDVGTSKERIHELQSELDN 489


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = +2

Query: 518 RQRKKKMDKDGLVKMSSGVTEQLLSVS---RQLADTTQKSQNTLDNLVSSSSTVHGTQSE 688
           +Q+K+K  K  L+++S G  E   SVS   R+  D     +   D ++    T    ++ 
Sbjct: 376 QQQKRKRPKPELIEISPGQNETFESVSLKIRKAVDDNGTHKELKDFIIMGRRT---DKAL 432

Query: 689 LENTAGTITQSSKLLKEIRT 748
           L  T      ++ +L++IRT
Sbjct: 433 LRLTLARSANATLILQQIRT 452


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 656 MKPNYPKYFDSFVWCPLAACLRKVIALSHLMTF*PIHPYPSFSFF 522
           +KP + K +D  VWC  AA  +   +LS  + F  I  Y S++ F
Sbjct: 314 LKPQWDKIYDPKVWC--AAVTQCFFSLS--ICFGNIIMYSSYNKF 354


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 19/107 (17%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
 Frame = +2

Query: 431  DANINSMFAIEKAQREDLLXCSDNEKSSVRQR----KKKMDK-DGLVKMSSGVTEQLLSV 595
            DA    +  ++K +++      D  + + R R     K +D    +++    +   L+++
Sbjct: 1035 DAPYKRLVLVDKKRQKKYKRNLDELRQATRLRVDAKSKSLDSCSDILQEVPNLNRDLINL 1094

Query: 596  SRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLLK 736
             RQ+   ++ S+N  +   S      G    L+   G +T+    +K
Sbjct: 1095 FRQMPKVSELSENETEYSSSDQLMGGGKPGPLKEVNGVVTRKGAPMK 1141


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 251 CRESMEKLNELNEKGRAKITEVREELENLYLYGK 352
           C E+  K+N      RAK +E RE+L  LY+  +
Sbjct: 285 CIEARRKMN------RAKSSEQREDLRRLYILAR 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,617
Number of Sequences: 2352
Number of extensions: 14046
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)