Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E21
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8RE29 Cluster: Integral membrane protein; n=1; Fusobac...    34   2.9  
UniRef50_Q237H6 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_UPI0000498C31 Cluster: aminoalcoholphosphotransferase; ...    33   5.1  

>UniRef50_Q8RE29 Cluster: Integral membrane protein; n=1;
           Fusobacterium nucleatum subsp. nucleatum|Rep: Integral
           membrane protein - Fusobacterium nucleatum subsp.
           nucleatum
          Length = 263

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
 Frame = -1

Query: 595 FFFLS-----RQYVYYEFHNTKTFVF--YILRTVKLLLNR*LINTISFSLDLAIILYH*F 437
           FFF+S     + + Y + +N  TF++  YI+    LL ++ +INT+   +DL     + +
Sbjct: 154 FFFISTINRRKIFNYIKNNNFITFIYAIYIISIYILLKSKGIINTLFDFMDLFFTFIYIY 213

Query: 436 VFFGAFSVSQQVLIFSSS 383
           +FF  F    +++ + SS
Sbjct: 214 IFFKLFQFILEIIKYHSS 231


>UniRef50_Q237H6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 607

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = -1

Query: 589 FLSRQYVYYEFHNTKTF----VFYILRTVKLLLNR*LINTISFSLDLAIILYH 443
           FL+R  +YY  HNTKTF       I +  +LLL   +IN   +S D+  +++H
Sbjct: 360 FLNRN-IYYPHHNTKTFRSNKFMSIKKFTQLLLKPYVINFEQYSPDVLFLVFH 411


>UniRef50_UPI0000498C31 Cluster: aminoalcoholphosphotransferase;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep:
           aminoalcoholphosphotransferase - Entamoeba histolytica
           HM-1:IMSS
          Length = 377

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 594 FFFYLDNMFIMNSIIQKHLYFIFYVQLNYCL 502
           F  +LD+MF+ NS+I+  L  +F V  +YC+
Sbjct: 134 FVGFLDHMFLCNSVIKDMLIVLFMVYTSYCV 164


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,849,710
Number of Sequences: 1657284
Number of extensions: 5639159
Number of successful extensions: 10340
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10334
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)