Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_E19
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23H4.06 |gln1||glutamate-ammonia ligase Gln1|Schizosaccharom... 217 2e-57
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 29 0.86
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 28 2.0
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 27 3.5
SPBC405.02c ||SPBC4C3.01|sequence orphan|Schizosaccharomyces pom... 27 4.6
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 26 8.0
SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 26 8.0
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 26 8.0
>SPAC23H4.06 |gln1||glutamate-ammonia ligase
Gln1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 359
Score = 217 bits (530), Expect = 2e-57
Identities = 107/203 (52%), Positives = 134/203 (66%), Gaps = 1/203 (0%)
Frame = +2
Query: 203 VLSKT-LLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGS 379
+LSK +L++Y DLP K++A YIWIDG HLR K TL+ P + L +WNFDGS
Sbjct: 9 LLSKAAILNKYADLPQNG-KVMAEYIWIDGFN-HLRSKTMTLDAKPSSIDQLRVWNFDGS 66
Query: 380 STNQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCK 559
ST QA G+NSDT L P A+Y DPFRRG++ILV+ Y + P N+R +C + +K
Sbjct: 67 STGQAPGNNSDTLLKPVAMYNDPFRRGDNILVLAACYTADGSPNGFNHRDACAKLLEKHA 126
Query: 560 DDEPWFGIEQEYILLDSDLRXXXXXXXXXXXXXXXYYCGVGANKVFARDLVEAHYRCCLY 739
D E WFGIEQEY +LD R +YCGVG +VFARD+VEAHY+ CLY
Sbjct: 127 DKETWFGIEQEYTMLDYYDRPFGWPKGGFPGPQGPFYCGVGTGRVFARDIVEAHYKACLY 186
Query: 740 AGVPIAGTNAEVMPSQWEFQVGP 808
AG+ I+G NAEVMPSQWE+QVGP
Sbjct: 187 AGINISGINAEVMPSQWEYQVGP 209
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 325 QGAIFAPQVFARAVDPNVGGENLVSRQWKIIVSTQ 221
Q IF AR +VGG + SR WKI+ +Q
Sbjct: 292 QDVIFGVDALARERCVSVGGRDRTSRLWKIVEESQ 326
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 27.9 bits (59), Expect = 2.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 618 APSGGPRVVS---PHRKGHTTAVSVPTKSLPETLSKPTIDAVFMLAYRLPVQTLK*CLHS 788
AP+ PR VS P + TTA +V K P+T +P+ F +T K L
Sbjct: 301 APAPIPRPVSTLIPLTQVRTTASNV-IKPRPQTTERPSTAQSFRKGGGFLKKTFKKLLRR 359
Query: 789 GSSKSVP 809
GSSK P
Sbjct: 360 GSSKRKP 366
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 137 HTKIEDNPKILSGPVLTNSPNAVLSKTLLSRYNDLPLPA 253
H KIE+N + +S P ++ S L L + + LPA
Sbjct: 116 HDKIEENKRPISQPQVSASEKVTLKDLSLEPHQPVSLPA 154
>SPBC405.02c ||SPBC4C3.01|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +2
Query: 146 IEDNPKILSGPVLTNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTL 325
++DN + S +S N+ LS + + +P+PA + T + D + R T
Sbjct: 295 LQDNASLTSQGSNLSSQNSGLSSSSSGIFGRMPIPAQSLDTTMLRTDSNSNIRRA---TT 351
Query: 326 NFIPKAPKD 352
+FI + K+
Sbjct: 352 SFIANSEKE 360
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 377 SSTNQADGHNSDTYLVPRAI 436
+ T +G NSDTY++PR +
Sbjct: 219 TETRILNGKNSDTYIIPRPL 238
>SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 794 TPTVKASLQRLYRQSVRQHKDSIDSGLRQGLWQRLCWHRHRSSMALAVGGN 642
TPT RL + H + SG+ W +LC+ R ++ ++GG+
Sbjct: 286 TPTTANGTLRLRMDAFYNHDLNFRSGMVT-TWNKLCFKGGRIEVSASLGGS 335
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 25.8 bits (54), Expect = 8.0
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Frame = -1
Query: 598 NIFLFYPKPGLIILAFVVS-------FLTTDAIVALCWLHVVFIRITHNEDVISSTEWIL 440
N L + KPGL+ +A F+TT L HVVF +T DV+ E +
Sbjct: 85 NFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLG 144
Query: 439 VNS 431
NS
Sbjct: 145 SNS 147
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,894,354
Number of Sequences: 5004
Number of extensions: 87979
Number of successful extensions: 250
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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