Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E18
         (836 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5YPQ7 Cluster: Putative transporter; n=1; Nocardia far...    37   0.55 
UniRef50_Q23QL0 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  
UniRef50_A6VZ70 Cluster: Putative uncharacterized protein; n=1; ...    34   5.1  
UniRef50_Q61CX2 Cluster: Putative uncharacterized protein CBG127...    34   5.1  
UniRef50_A0DME0 Cluster: Chromosome undetermined scaffold_56, wh...    33   6.7  
UniRef50_O20533 Cluster: DNA-directed RNA polymerase; n=1; Ascos...    33   6.7  
UniRef50_UPI0000E48EBC Cluster: PREDICTED: hypothetical protein;...    33   8.9  
UniRef50_Q6VZJ2 Cluster: CNPV155 variola B22R-like protein; n=2;...    33   8.9  
UniRef50_Q62C18 Cluster: Putative uncharacterized protein; n=3; ...    33   8.9  
UniRef50_Q7PL32 Cluster: CG40323-PB.3; n=3; Eumetazoa|Rep: CG403...    33   8.9  

>UniRef50_Q5YPQ7 Cluster: Putative transporter; n=1; Nocardia
           farcinica|Rep: Putative transporter - Nocardia farcinica
          Length = 1367

 Score = 37.1 bits (82), Expect = 0.55
 Identities = 22/55 (40%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 KPLGTAARTSASLQRSRSSGPRTRTAPAKS*TSCTMGAIR*RTSTGPATRTSLST 488
           KP  T  R++   + +RSS   TRT PA   T+   GA R R+ T PA R    T
Sbjct: 744 KP-STPTRSTNGTRTARSSSNPTRTTPAGDPTAADAGAARSRSGTAPAARPDTRT 797


>UniRef50_Q23QL0 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1902

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 22/96 (22%), Positives = 46/96 (47%)
 Frame = +2

Query: 140  INCRISRSSEAQCLSYYNNEENFDLDTLSGQMYAVYYWPPNQRTRNACEVQTFKKLDTYE 319
            IN  I  +   + ++YY N+ +F+  +++ +MY++ Y   NQ T        + ++D  +
Sbjct: 1121 INNLIGMNDFHKNMNYYQNQSSFNEKSINNEMYSINY---NQNT--FYNNHMYNEIDEIK 1175

Query: 320  IETARNGCSNLSLPSEEPVIRATYKNSTGKIVNVLY 427
            I+ + N  + L+  + +   R    N   K  N+ Y
Sbjct: 1176 IQQSSNQLNKLNTTNNDEASRIGLLNKQQKQQNLQY 1211


>UniRef50_A6VZ70 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MWYL1|Rep: Putative uncharacterized
           protein - Marinomonas sp. MWYL1
          Length = 244

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 687 LFYFRDYLYRVAI--RFKRHSVYYATFIFVIKGTFYLILATRSRFASETVI 833
           LF   +YL++  I  RF  H     TF+F+IKG  YL   T+ +   ET +
Sbjct: 33  LFIAHEYLFQTDIPSRFYHHQT--DTFLFIIKGELYLQQCTQQKSEQETAL 81


>UniRef50_Q61CX2 Cluster: Putative uncharacterized protein CBG12725;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG12725 - Caenorhabditis
           briggsae
          Length = 411

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +3

Query: 219 RYRDKCTRSITGPRIRERGTPAKYKPSRNSIHTK*KPLGTAARTSA---SLQRSRSSGPR 389
           R RD+  +SI   + R R  P KYK S  +  TK + L + A  SA     Q S SS P 
Sbjct: 200 RERDEAAQSIRYNKFRVRNRPKKYKRSAVTFTTKTRDLASQATVSAEPSEPQASSSSAPE 259

Query: 390 T 392
           +
Sbjct: 260 S 260


>UniRef50_A0DME0 Cluster: Chromosome undetermined scaffold_56, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_56,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 352

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 260 NQRTRNACEVQTFKKLDTYEIETARNGCSNLSLPSEE 370
           N + RNA  + TF+K D+Y+    +N C  LS   EE
Sbjct: 189 NDKFRNASLITTFRKEDSYQYSKLQNACKLLSSNPEE 225


>UniRef50_O20533 Cluster: DNA-directed RNA polymerase; n=1;
           Ascosphaera aggregata|Rep: DNA-directed RNA polymerase -
           Ascosphaera aggregata
          Length = 441

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +2

Query: 56  NDCSEYNVLSNNMETVVFFLIITSFFCAINCRISRSSEAQCLSYYNN--EENFDLDTLS 226
           +DC  + V SNNM+ ++  L +T  +   N    R+ +    +Y  N   ENFDLDTL+
Sbjct: 350 HDC--FAVTSNNMQQLIDCLKLTYIYLYSNKGYLRNFDDNFKNYLKNILNENFDLDTLT 406


>UniRef50_UPI0000E48EBC Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 588

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +3

Query: 333 GTAARTSASLQRSRSSGPRTRTAPAKS*TSCTMGAIR*RTSTGPATRTSLST 488
           G A+RTS     S ++G  T      S TS T G    RT+TG  T  +  T
Sbjct: 361 GAASRTSTGSTTSSTTGTATSRTSTGSTTSSTTGTTATRTTTGSTTSNTAGT 412


>UniRef50_Q6VZJ2 Cluster: CNPV155 variola B22R-like protein; n=2;
            Avipoxvirus|Rep: CNPV155 variola B22R-like protein -
            Canarypox virus (CNPV)
          Length = 1830

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 287  VQTFKKLDTYEIETARNGCSNLSLPSEEPVIRATYKNST 403
            +QTF     Y  +TAR+G     +P  E ++  +Y+N T
Sbjct: 932  IQTFNMYSRYMSDTARSGVRKCMIPGTETLVYMSYRNDT 970


>UniRef50_Q62C18 Cluster: Putative uncharacterized protein; n=3;
           Burkholderia|Rep: Putative uncharacterized protein -
           Burkholderia mallei (Pseudomonas mallei)
          Length = 120

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +3

Query: 246 ITGPRIRERGTPAKYKPSRNSIHTK*KPLGTAARTSASLQRSRSSGPRTRTAPAKS 413
           + GPRI  R +P +Y+        + +    A R+S++   +R++ PR R APA +
Sbjct: 19  VAGPRIPRRASPRRYRTGATRHRGRRRAPHRARRSSSAA--TRTAAPRARRAPAST 72


>UniRef50_Q7PL32 Cluster: CG40323-PB.3; n=3; Eumetazoa|Rep:
            CG40323-PB.3 - Drosophila melanogaster (Fruit fly)
          Length = 5122

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
 Frame = +3

Query: 216  IRYRDKCTRSITGPRIRERGTPAKYKPSRNSIHTK*KPLGTAARTSASL---QRSRSSGP 386
            +R RD+   S TGP   + GT     P R+   T   P+G    TS      Q   S+GP
Sbjct: 2390 VRVRDQYGTS-TGPVRDQYGTSTG--PVRDQYGTSTGPVGDQYGTSTGPVQDQYGTSTGP 2446

Query: 387  RTRTAPAKS*TSCTMGAIR*R--TSTGP 464
             T T P +     + G +R +  TSTGP
Sbjct: 2447 STSTGPVRDQYGTSTGPVRDQYGTSTGP 2474


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,320,039
Number of Sequences: 1657284
Number of extensions: 14729219
Number of successful extensions: 43173
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 41370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43147
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)