Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_E15
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77663-9|CAB01203.1| 239|Caenorhabditis elegans Hypothetical pr... 293 9e-80
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z49130-3|CAA88968.1| 395|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80030-8|AAG24166.2| 375|Caenorhabditis elegans Serpentine rece... 29 3.5
AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical ... 29 4.6
U00033-15|AAC48298.2| 434|Caenorhabditis elegans Hypothetical p... 28 8.0
>Z77663-9|CAB01203.1| 239|Caenorhabditis elegans Hypothetical
protein F53F4.10 protein.
Length = 239
Score = 293 bits (719), Expect = 9e-80
Identities = 133/214 (62%), Positives = 167/214 (78%)
Frame = +1
Query: 46 LFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPIS 225
L VHRDT E+N ++ F+F+ NQ+R++A++ IYPEGHK GA+IPLLDLAQRQ G WLPIS
Sbjct: 27 LMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIPLLDLAQRQHG-WLPIS 85
Query: 226 AMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 405
AMH+VA+IL +P+MR YEVATFYTMF R+P+GKY +QVC TTPC LRG++ I I+++
Sbjct: 86 AMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVCATTPCMLRGAETITETIEKKL 145
Query: 406 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKP 585
G + G F+++EVECLGACVNAPMIQ+NDDY+EDL+ +D EI+ LK KP
Sbjct: 146 GIHAGETTKDGLFTLAEVECLGACVNAPMIQINDDYFEDLTPKDVNEILDDLKAGRKPAA 205
Query: 586 GPRSGRFASEPLGGLTSLTEEPTGPGFGVQDALK 687
GPRSGR A+EP G LTSL E P GPGFG+Q ALK
Sbjct: 206 GPRSGRLAAEPFGELTSLKETPPGPGFGLQAALK 239
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 526 SVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFGVQDALKA 690
++ D+ I +++K E P+ P +GR A + +PTG G G Q LKA
Sbjct: 143 AIIDSANIANRVKFPEAPRRAPSNGRPAQRAPKRQNVKSGKPTG-GAGAQKKLKA 196
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = -1
Query: 708 QDNTRLRLECILYSEARPCGFFSQRGQSSERLRRESSTPGPRFGLLVLL*FADNFFCIFY 529
Q +TRLR++ + + PC F+ S+ RL +T V D C+
Sbjct: 706 QLSTRLRIKSFSHMLSLPCAFYDDPNHSATRLSNRLNTDSSNVKAAV----DDRLGCVIM 761
Query: 528 RQVLIVIII---DLYHW 487
V I I I LY W
Sbjct: 762 TVVAISIAITTASLYCW 778
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = -1
Query: 708 QDNTRLRLECILYSEARPCGFFSQRGQSSERLRRESSTPGPRFGLLVLL*FADNFFCIFY 529
Q +TRLR++ + + PC F+ S+ RL +T V D C+
Sbjct: 765 QLSTRLRIKSFSHMLSLPCAFYDDPNHSATRLSNRLNTDSSNVKAAV----DDRLGCVIM 820
Query: 528 RQVLIVIII---DLYHW 487
V I I I LY W
Sbjct: 821 TVVAISIAITTASLYCW 837
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = -1
Query: 708 QDNTRLRLECILYSEARPCGFFSQRGQSSERLRRESSTPGPRFGLLVLL*FADNFFCIFY 529
Q +TRLR++ + + PC F+ S+ RL +T V D C+
Sbjct: 765 QLSTRLRIKSFSHMLSLPCAFYDDPNHSATRLSNRLNTDSSNVKAAV----DDRLGCVIM 820
Query: 528 RQVLIVIII---DLYHW 487
V I I I LY W
Sbjct: 821 TVVAISIAITTASLYCW 837
>Z49130-3|CAA88968.1| 395|Caenorhabditis elegans Hypothetical
protein T06D8.5 protein.
Length = 395
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 145 PEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 300
P+ +R A+ L LAQ G W+ S + ++P++ Y +AT TM
Sbjct: 162 PDMKRRMALATTLLLAQGGIGWWMVKSGLDPSKNSSDVPRVSQYRLATHLTM 213
>U80030-8|AAG24166.2| 375|Caenorhabditis elegans Serpentine
receptor, class w protein112 protein.
Length = 375
Score = 29.1 bits (62), Expect = 3.5
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 10/132 (7%)
Frame = -1
Query: 732 LFK*FLFTQDNTRLRLECILYS--------EARPCGFFSQRGQSSERLRRESS--TPGPR 583
++ F + + T + C+LY E R ++ SS +++SS T
Sbjct: 218 IYNIFFYLEGVTSKLIPCLLYPIATVFLIIEIRKAAINRKKISSSSSSQQDSSGRTTKLI 277
Query: 582 FGLLVLL*FADNFFCIFYRQVLIVIIIDLYHWGVHTSSQTFNL*NRKLATRTVASNLTVC 403
F L V+ + +FY +L I+ WG +T F L T T A ++ +C
Sbjct: 278 FYLTVIFYIGEFPMAVFY--ILNPILQMSIQWGFYTYLVYFEFLFSTLLTATTAIHMPIC 335
Query: 402 FLFNCIQYGIRA 367
L + QY I A
Sbjct: 336 LLMSS-QYKITA 346
>AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical
protein Y53G8AL.3 protein.
Length = 252
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 337 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY- 513
VC ++P L + +I+ + + G N S + GAC+ P I + Y
Sbjct: 84 VCVSSPPPLSHHSYLETSIETSKSEQCGANRKTTSMSFQKSFVTGACLTYPFIGQSLTYR 143
Query: 514 -YEDLSVEDTKEIIS 555
EDL+ +D +I++
Sbjct: 144 NQEDLAAQDYSKIMT 158
>U00033-15|AAC48298.2| 434|Caenorhabditis elegans Hypothetical
protein F37C12.13a protein.
Length = 434
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 313 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 411
P+ YH+ +CTT +G +++ +ET C
Sbjct: 184 PLNIYHMPICTTIGLLDKGQIVVIDPTDKETAC 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,120,547
Number of Sequences: 27780
Number of extensions: 402039
Number of successful extensions: 1141
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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