Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_E11
(781 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 37 0.004
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 33 0.046
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 29 0.57
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 29 0.57
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 28 1.3
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 28 1.7
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 27 2.3
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 26 5.3
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 25 9.2
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 25 9.2
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 36.7 bits (81), Expect = 0.004
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 476 NTIRLSAGLIGKNEPDANGQRG-VIVNTASTIAYXGDIGQXXXXXXXXXIIGMTLPIARD 652
+ I+LS I + + N +R +I+N +S ++ G + T +A +
Sbjct: 109 SAIKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAE 168
Query: 653 LASKGIRVVTIXPGIFDTPLTS 718
+ASKGIRV I PG DTP+ S
Sbjct: 169 VASKGIRVNAISPGYVDTPMLS 190
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 33.1 bits (72), Expect = 0.046
Identities = 38/160 (23%), Positives = 58/160 (36%)
Frame = +2
Query: 284 GSITSEDDVKKALDITKDKFGRLDTLXNCAGQSXTXQIYXXNKDLPSTLADFTKIINVNT 463
G + D+ + +D K G +D L N Q+ +D+ D T N+
Sbjct: 100 GKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQ---QVAQSIEDIDDEQWDLTFKTNI-- 154
Query: 464 VGTFNTIRLSAGLIGKNEPDANGQRGVIVNTASTIAYXGDIGQXXXXXXXXXIIGMTLPI 643
F+ ++ I + ++ IVN +S AY G I T +
Sbjct: 155 ---FSFFWVTKAAISHMKSGSS-----IVNCSSINAYVGRPDLLDYTSTKGAITAFTRGL 206
Query: 644 ARDLASKGIRVVTIXPGIFDTPLTSYLPQKMKEFIKRMTP 763
+ A GIRV + PG TPL S K K + P
Sbjct: 207 SNQYAQHGIRVNAVAPGPIYTPLVSSTFPKEKIELSDQVP 246
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 29.5 bits (63), Expect = 0.57
Identities = 31/139 (22%), Positives = 54/139 (38%)
Frame = +2
Query: 290 ITSEDDVKKALDITKDKFGRLDTLXNCAGQSXTXQIYXXNKDLPSTLADFTKIINVNTVG 469
+ + +KK+++ FGR+D L N AG S +Y + +T I N N G
Sbjct: 23 VNNFSSIKKSVEKAISHFGRIDVLLNNAGYS----VYSPLES--TTEEQIHNIFNTNVFG 76
Query: 470 TFNTIRLSAGLIGKNEPDANGQRGVIVNTASTIAYXGDIGQXXXXXXXXXIIGMTLPIAR 649
I+ + + G+I+N +S I G++ +
Sbjct: 77 ALEVIKAITPIF------RSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTW 130
Query: 650 DLASKGIRVVTIXPGIFDT 706
++ S G++V I PG T
Sbjct: 131 EMQSIGVKVKIIEPGFTAT 149
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 29.5 bits (63), Expect = 0.57
Identities = 31/139 (22%), Positives = 54/139 (38%)
Frame = +2
Query: 290 ITSEDDVKKALDITKDKFGRLDTLXNCAGQSXTXQIYXXNKDLPSTLADFTKIINVNTVG 469
+ + +KK+++ FGR+D L N AG S +Y + +T I N N G
Sbjct: 23 VNNFSSIKKSVEKAISHFGRIDVLLNNAGYS----VYSPLES--TTEEQIHNIFNTNVFG 76
Query: 470 TFNTIRLSAGLIGKNEPDANGQRGVIVNTASTIAYXGDIGQXXXXXXXXXIIGMTLPIAR 649
I+ + + G+I+N +S I G++ +
Sbjct: 77 ALEVIKAITPIF------RSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTW 130
Query: 650 DLASKGIRVVTIXPGIFDT 706
++ S G++V I PG T
Sbjct: 131 EMQSIGVKVKIIEPGFTAT 149
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 28.3 bits (60), Expect = 1.3
Identities = 37/181 (20%), Positives = 70/181 (38%)
Frame = +2
Query: 170 ATAERLVKQGGKVVLLDIXGTRLKEXTKEIGDDAIAVTGSITSEDDVKKALDITKDKFGR 349
ATAE L K+ + + L+ + D + V G +T K +++ KFG+
Sbjct: 21 ATAEALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDVTEVG--KASIETAIKKFGK 78
Query: 350 LDTLXNCAGQSXTXQIYXXNKDLPSTLADFTKIINVNTVGTFNTIRLSAGLIGKNEPDAN 529
LD++ AG + K + + ++ K+ ++N T++ + P
Sbjct: 79 LDSVILNAGV-----LEPIAKIADADINEWRKLFDINFFSVVETVKYAI-------PHLR 126
Query: 530 GQRGVIVNTASTIAYXGDIGQXXXXXXXXXIIGMTLPIARDLASKGIRVVTIXPGIFDTP 709
+G IV +S A I + + + + I V + PG+ DTP
Sbjct: 127 KTKGTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSE--EPDIMSVAVRPGVVDTP 184
Query: 710 L 712
+
Sbjct: 185 M 185
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 632 TLPIARDLASKGIRVVTIXPGIFDTPLTSYLP 727
++ +A+ L GI V++ PG+ T LT Y P
Sbjct: 224 SIALAKRLEKYGIYSVSLHPGVIRTELTRYSP 255
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 452 NVNTVGTFNTIRLSAGLIGKN-EPDANGQRGVIVNTAST 565
N +T G F+T SAGL G++ +P + G+ NT +T
Sbjct: 170 NTSTFGQFSTQPASAGLFGQSTQPSGSTGFGLSNNTQTT 208
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 188 VKQGGKVVLLDIXGTRLKEXTKEIGDDAIAVTGSITSEDDVKKALDITKDK 340
+K G + ++DI +E E G DA+ + I E K L I + K
Sbjct: 955 MKSGEMISVMDIGKEETREPEIEYGKDALDLVDLIPKEFPTSKDLGIDEPK 1005
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 547 YNSSLAISVWFILTNQSSR*PNCVECSNSV 458
YNS +S + TN S R PN +E + +
Sbjct: 361 YNSGETMSTYLNQTNTSGRSPNSMEATEQI 390
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 106 IVKNA*GYGQPGXWWSFWIR*G 171
IVKN G+ +PG + S W++ G
Sbjct: 358 IVKNVNGFVRPGIYTSGWVKHG 379
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,644,664
Number of Sequences: 5004
Number of extensions: 45480
Number of successful extensions: 125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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