Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E11
         (781 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   4.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   4.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   4.2  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   4.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.4  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 162 NPEAPPXTRLTIPLSIFHDKEN 97
           +P  PP  RLT   SI H+ +N
Sbjct: 209 SPLCPPAPRLTNSNSIKHESDN 230


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 180 SAVALPNPEAPPXTRLTIPLSIFHDKENQKV 88
           +++   + E+P  T   +P  IF+DK N+ +
Sbjct: 557 NSIERQSSESPFTTSTIMPSDIFYDKLNKAI 587


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 180 SAVALPNPEAPPXTRLTIPLSIFHDKENQKV 88
           +++   + E+P  T   +P  IF+DK N+ +
Sbjct: 557 NSIERQSSESPFTTSTIMPSDIFYDKLNKAI 587


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 679 YHXTRYI*HAPNVIFTTENEGIHQAYDSIPL 771
           +  T+YI H  +   T E + IH+    +PL
Sbjct: 316 FQSTQYIRHIKSPYHTPEPDCIHELLGHMPL 346


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 131 PYP*AFFTIRKTRKFLF 81
           PYP  FF I   RK LF
Sbjct: 221 PYPDIFFNITLRRKTLF 237


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 529 WPKRSYSQYGINNSIR 576
           WP  S  Q G+N +IR
Sbjct: 590 WPSTSQIQRGVNAAIR 605


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,078
Number of Sequences: 438
Number of extensions: 3365
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)