Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E10
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    28   0.069
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.0  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 440 RTKILYFLILLVKLDVTYNYCVRWRPSDG-VYGNITSKISF 321
           +  IL+  I+ +KLD +  Y +  +P DG +  NIT+K  F
Sbjct: 160 KVTILHPNIVKLKLDTSEGYTLSVKPRDGEIVANITAKTFF 200


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 259 GVRTFYSKRRRWCCYVTCYLKNEILDVMLPY 351
           G   FY++RRRW   +   + N ILD+++ Y
Sbjct: 609 GFNEFYNQRRRW---MPSTMAN-ILDLLMDY 635


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 259 GVRTFYSKRRRWCCYVTCYLKNEILDVMLPY 351
           G   FY++RRRW   +   + N ILD+++ Y
Sbjct: 842 GFNEFYNQRRRW---MPSTMAN-ILDLLMDY 868


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 259 GVRTFYSKRRRWCCYVTCYLKNEILDVMLPY 351
           G   FY++RRRW   +   + N ILD+++ Y
Sbjct: 842 GFNEFYNQRRRW---MPSTMAN-ILDLLMDY 868


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 259 GVRTFYSKRRRW 294
           G   FY++RRRW
Sbjct: 869 GFNEFYNQRRRW 880


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 259 GVRTFYSKRRRW 294
           G   FY++RRRW
Sbjct: 869 GFNEFYNQRRRW 880


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 259 GVRTFYSKRRRW 294
           G   FY++RRRW
Sbjct: 869 GFNEFYNQRRRW 880


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 259 GVRTFYSKRRRW 294
           G   FY++RRRW
Sbjct: 869 GFNEFYNQRRRW 880


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 619 CNLYKVFPKHFSC 581
           C  + +FP HF C
Sbjct: 302 CRAFIIFPTHFYC 314


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 630 KSYYVTFIKCSPNILVVDSIQLVIFFNTD 544
           + YY +  KC   +L+V  I  VI++  D
Sbjct: 37  QKYYPSLAKCYACLLMVVKILWVIYWLQD 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,087
Number of Sequences: 336
Number of extensions: 3383
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)