Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E10
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0611 + 24347384-24350015,24350126-24350497,24350561-243508...    29   3.9  
11_06_0675 + 26139284-26139745,26139932-26139980,26140118-261402...    28   6.9  
03_05_0916 - 28762214-28762414,28763144-28763242,28763573-287639...    28   6.9  
05_05_0065 - 22069798-22069890,22070878-22071160,22071240-220713...    28   9.1  

>02_04_0611 +
           24347384-24350015,24350126-24350497,24350561-24350805,
           24350997-24351059,24351919-24352422
          Length = 1271

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -3

Query: 428 LYFLILLVKLDVTYNYCVRWRPSDGVYGNITS 333
           L +L LL KLD++YN      P+ GV+ N+TS
Sbjct: 562 LGYLPLLSKLDLSYNNLQGEVPTVGVFRNVTS 593


>11_06_0675 +
           26139284-26139745,26139932-26139980,26140118-26140215,
           26140378-26140588,26140707-26140947,26141051-26141216,
           26141308-26141451
          Length = 456

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 32  LPFYQFENEVTEKDIRF*QHCNVRRHLGWCCQ 127
           +PF Q ENE   K I   QH N+ + LG+C Q
Sbjct: 223 IPFDQLENEA--KIISKLQHTNIVKLLGYCSQ 252


>03_05_0916 -
           28762214-28762414,28763144-28763242,28763573-28763998,
           28764259-28764501,28764706-28764927,28765392-28765721,
           28767380-28767800,28768292-28768404,28769224-28769367,
           28769439-28769570,28769802-28770013,28770983-28771505
          Length = 1021

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = +3

Query: 144 SSFIIELSKCLSYCNI-VCKEYIDK 215
           SS  IEL K L+YC++ +CKE++++
Sbjct: 547 SSGAIELLKGLNYCDLKICKEFLEE 571


>05_05_0065 -
           22069798-22069890,22070878-22071160,22071240-22071335,
           22071456-22071558,22071633-22071693,22071816-22071887,
           22072315-22072383,22072459-22072482,22073278-22073316,
           22073862-22073951,22074063-22074095
          Length = 320

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 550 HRCYSLI-VRFYTLIILFNIVKILITFNYIVTSLLLIREQKYY 425
           H  ++L+ VR Y        VK+L  F  IV SLL+I  +K+Y
Sbjct: 146 HMIFTLVFVRTYHKYGSKRFVKLLAWFMAIVQSLLIIASRKHY 188


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,099,237
Number of Sequences: 37544
Number of extensions: 279525
Number of successful extensions: 536
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)