Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E04
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   2.7  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   6.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   6.3  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 195 FDDSILFGINWPGNPNLNENFVDG 266
           F+DS   G NW  N  L  NF+DG
Sbjct: 17  FEDSDE-GSNWNWNTLLRPNFLDG 39


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 195 FDDSILFGINWPGNPNLNENFVDG 266
           F+DS   G NW  N  L  NF+DG
Sbjct: 61  FEDSDE-GSNWNWNTLLRPNFLDG 83


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 195 FDDSILFGINWPGNPNLNENFVDG 266
           F+DS   G NW  N  L  NF+DG
Sbjct: 61  FEDSDE-GSNWNWNTLLRPNFLDG 83


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 195 FDDSILFGINWPGNPNLNENFVDG 266
           F+DS   G NW  N  L  NF+DG
Sbjct: 61  FEDSDE-GSNWNWNTLLRPNFLDG 83


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/41 (21%), Positives = 24/41 (58%)
 Frame = +3

Query: 132 VKIVMLSLVYSCIGIEHDFKGFDDSILFGINWPGNPNLNEN 254
           + I  +++VYS +GI   + G    ++   +W G+ +++++
Sbjct: 89  IDICWITMVYSLLGIIIAYTGDVHGVIGAGHWIGDHDVDKD 129


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 444 RLESYWSYEVCHGRYIRQYHEER 512
           R  S+     CH RY    HE+R
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDR 242


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 444 RLESYWSYEVCHGRYIRQYHEER 512
           R  S+     CH RY    HE+R
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDR 242


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 444 RLESYWSYEVCHGRYIRQYHEER 512
           R  S+     CH RY    HE+R
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDR 242


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 444 RLESYWSYEVCHGRYIRQYHEER 512
           R  S+     CH RY    HE+R
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDR 242


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 444 RLESYWSYEVCHGRYIRQYHEER 512
           R  S+     CH RY    HE+R
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDR 242


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 444 RLESYWSYEVCHGRYIRQYHEER 512
           R  S+     CH RY    HE+R
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDR 242


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,243
Number of Sequences: 438
Number of extensions: 5052
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)