Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_E03
(888 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D568E8 Cluster: PREDICTED: similar to CG2100-PA;... 351 1e-95
UniRef50_Q9VNH2 Cluster: CG2100-PA; n=9; Coelomata|Rep: CG2100-P... 350 2e-95
UniRef50_UPI00015B5D79 Cluster: PREDICTED: similar to ENSANGP000... 341 1e-92
UniRef50_UPI0000DB7A53 Cluster: PREDICTED: similar to CG2100-PA;... 338 1e-91
UniRef50_UPI0000E49DF6 Cluster: PREDICTED: similar to Chain A, C... 308 1e-82
UniRef50_Q96Q11 Cluster: tRNA-nucleotidyltransferase 1, mitochon... 302 6e-81
UniRef50_Q93795 Cluster: Putative uncharacterized protein; n=2; ... 277 3e-73
UniRef50_A7RRV1 Cluster: Predicted protein; n=1; Nematostella ve... 258 1e-67
UniRef50_Q5C3N6 Cluster: SJCHGC09232 protein; n=1; Schistosoma j... 192 8e-48
UniRef50_Q40IR0 Cluster: Polynucleotide adenylyltransferase; n=8... 169 8e-41
UniRef50_Q2GDC2 Cluster: PolyA polymerase family protein; n=1; N... 166 8e-40
UniRef50_Q4FPG1 Cluster: Poly(A) Polymerase; n=3; Bacteria|Rep: ... 165 2e-39
UniRef50_Q0ARR5 Cluster: Polynucleotide adenylyltransferase regi... 157 3e-37
UniRef50_Q8FZD7 Cluster: PolyA polymerase family protein; n=13; ... 153 4e-36
UniRef50_A3VV21 Cluster: Possible poly(A) polymerase; n=1; Parvu... 153 4e-36
UniRef50_Q89SD1 Cluster: Poly(A) polymerase; n=11; Bradyrhizobia... 151 2e-35
UniRef50_Q5NNN0 Cluster: TRNA nucleotidyltransferase; n=3; Sphin... 148 2e-34
UniRef50_Q6G2K6 Cluster: Poly(A) polymerase; n=6; Rhizobiales|Re... 147 3e-34
UniRef50_A3UG83 Cluster: Probable poly(A) polymerase; n=1; Ocean... 146 5e-34
UniRef50_Q5P9P8 Cluster: Poly (A) polymerase; n=5; Anaplasmatace... 144 2e-33
UniRef50_Q1GCJ3 Cluster: Polynucleotide adenylyltransferase regi... 144 2e-33
UniRef50_Q0BRM1 Cluster: Poly(A) polymerase; n=2; Acetobacterace... 144 3e-33
UniRef50_Q5FU27 Cluster: Poly(A) polymerase/t-RNA nucleotidyltra... 141 2e-32
UniRef50_A0NYQ1 Cluster: Poly(A) polymerase; n=1; Stappia aggreg... 141 2e-32
UniRef50_Q2VZL3 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 141 2e-32
UniRef50_A5NWU9 Cluster: Polynucleotide adenylyltransferase regi... 141 2e-32
UniRef50_Q2RXH4 Cluster: Polynucleotide adenylyltransferase regi... 140 4e-32
UniRef50_Q0FDP1 Cluster: Poly A polymerase family protein; n=1; ... 139 8e-32
UniRef50_A5CCR6 Cluster: PolyA polymerase; n=1; Orientia tsutsug... 139 8e-32
UniRef50_Q1GRA3 Cluster: Polynucleotide adenylyltransferase regi... 139 1e-31
UniRef50_A4EGY8 Cluster: PolyA polymerase family protein; n=2; R... 138 1e-31
UniRef50_Q9AB26 Cluster: Poly A polymerase family protein; n=3; ... 137 4e-31
UniRef50_Q92JQ2 Cluster: Poly(A) polymerase [EC:2.7.7.19]; n=14;... 136 9e-31
UniRef50_Q0C5B7 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 132 1e-29
UniRef50_A0NJB1 Cluster: Polynucleotide adenylyltransferase; n=2... 129 8e-29
UniRef50_A7DHD6 Cluster: Polynucleotide adenylyltransferase regi... 126 6e-28
UniRef50_Q1EZ98 Cluster: HDIG; n=1; Clostridium oremlandii OhILA... 124 2e-27
UniRef50_Q3XW94 Cluster: Polynucleotide adenylyltransferase; n=1... 122 2e-26
UniRef50_Q5FKF0 Cluster: CCA-adding enzyme; n=5; Lactobacillus|R... 122 2e-26
UniRef50_A6NVT9 Cluster: Putative uncharacterized protein; n=1; ... 121 3e-26
UniRef50_Q1FP87 Cluster: TRNA adenylyltransferase; n=4; Clostrid... 119 9e-26
UniRef50_Q660G6 Cluster: Polynucleotide adenylyltransferase; n=3... 117 5e-25
UniRef50_Q895R6 Cluster: Poly(A) polymerase; n=9; Clostridium|Re... 116 8e-25
UniRef50_Q1VLB3 Cluster: PolyA polymerase family protein; n=1; P... 116 8e-25
UniRef50_A4XLP3 Cluster: TRNA adenylyltransferase; n=1; Caldicel... 116 8e-25
UniRef50_A0UUV7 Cluster: Metal dependent phosphohydrolase; n=1; ... 114 3e-24
UniRef50_A5Z8C9 Cluster: Putative uncharacterized protein; n=2; ... 113 6e-24
UniRef50_P42977 Cluster: CCA-adding enzyme; n=3; Bacillus|Rep: C... 113 8e-24
UniRef50_Q1VJ65 Cluster: Polynucleotide adenylyl transferase; n=... 111 2e-23
UniRef50_Q0TV45 Cluster: PolyA polymerase family protein; n=3; C... 111 2e-23
UniRef50_A6CRX0 Cluster: tRNA nucleotidyltransferase; n=1; Bacil... 111 3e-23
UniRef50_Q99U32 Cluster: CCA-adding enzyme; n=16; Staphylococcus... 110 4e-23
UniRef50_A4A0Y5 Cluster: Poly A polymerase; n=1; Blastopirellula... 109 7e-23
UniRef50_O25357 Cluster: Poly(A) polymerase; n=4; Helicobacter|R... 109 1e-22
UniRef50_Q2B3W5 Cluster: TRNA nucleotidyltransferase; n=1; Bacil... 108 2e-22
UniRef50_A6DP87 Cluster: Putative poly(A) polymerase; n=1; Lenti... 108 2e-22
UniRef50_Q5KXX0 Cluster: CCA-adding enzyme; n=4; Bacillaceae|Rep... 107 4e-22
UniRef50_A3IG30 Cluster: TRNA nucleotidyltransferase; n=1; Bacil... 106 9e-22
UniRef50_Q8EQD6 Cluster: CCA-adding enzyme; n=1; Oceanobacillus ... 105 1e-21
UniRef50_Q7UWK0 Cluster: Poly A polymerase; n=1; Pirellula sp.|R... 103 6e-21
UniRef50_Q81ST6 Cluster: CCA-adding enzyme; n=11; Bacillus cereu... 102 1e-20
UniRef50_Q7P2R0 Cluster: POLY(A) POLYMERASE; n=3; Fusobacterium ... 101 2e-20
UniRef50_Q6MM27 Cluster: Poly A polymerase; n=1; Bdellovibrio ba... 100 6e-20
UniRef50_Q1ASB2 Cluster: Polynucleotide adenylyltransferase regi... 100 6e-20
UniRef50_A1HMM1 Cluster: Polynucleotide adenylyltransferase; n=1... 99 7e-20
UniRef50_A0Z581 Cluster: Poly(A) polymerase; n=1; marine gamma p... 99 7e-20
UniRef50_UPI0000E87F63 Cluster: poly(A) polymerase; n=1; Methylo... 98 3e-19
UniRef50_A7H723 Cluster: Poly(A) polymerase; n=2; Anaeromyxobact... 98 3e-19
UniRef50_Q6MEY5 Cluster: Putative poly A polymerase; n=1; Candid... 97 4e-19
UniRef50_Q8F4S0 Cluster: Poly(A) polymerase; n=4; Leptospira|Rep... 97 5e-19
UniRef50_Q1YQK0 Cluster: Poly(A) polymerase; n=1; gamma proteoba... 97 5e-19
UniRef50_Q7VFG8 Cluster: Poly(A) polymerase; n=1; Helicobacter h... 97 7e-19
UniRef50_A6CGS1 Cluster: Metal dependent phosphohydrolase; n=1; ... 97 7e-19
UniRef50_Q92AA3 Cluster: CCA-adding enzyme; n=11; Listeria|Rep: ... 96 9e-19
UniRef50_A3DF92 Cluster: Metal dependent phosphohydrolase; n=1; ... 95 2e-18
UniRef50_Q73NW9 Cluster: PolyA polymerase family protein; n=1; T... 95 2e-18
UniRef50_Q1LJ89 Cluster: Poly(A) polymerase; n=1; Ralstonia meta... 95 2e-18
UniRef50_Q8DUL8 Cluster: CCA-adding enzyme; n=44; Streptococcace... 95 2e-18
UniRef50_Q41GT8 Cluster: Polynucleotide adenylyltransferase; n=1... 92 1e-17
UniRef50_Q9PLM2 Cluster: Poly(A) polymerase family protein; n=7;... 92 2e-17
UniRef50_Q6MBL7 Cluster: Putative Poly(A) polymerase; n=1; Candi... 91 5e-17
UniRef50_Q1IUE8 Cluster: Metal dependent phosphohydrolase; n=2; ... 91 5e-17
UniRef50_Q126S3 Cluster: Poly(A) polymerase; n=9; Burkholderiale... 91 5e-17
UniRef50_Q88W02 Cluster: CCA-adding enzyme; n=10; Lactobacillale... 91 5e-17
UniRef50_Q5ZVA2 Cluster: Poly(A) polymerase I; n=4; Legionella p... 90 6e-17
UniRef50_A7HCV9 Cluster: tRNA cytidylyltransferase; n=2; Anaerom... 90 6e-17
UniRef50_A6GIH1 Cluster: Polynucleotide adenylyltransferase regi... 90 8e-17
UniRef50_Q04RG6 Cluster: TRNA nucleotidyltransferase; n=4; Lepto... 89 1e-16
UniRef50_Q6AQS1 Cluster: Probable polyA polymerase; n=1; Desulfo... 89 1e-16
UniRef50_Q9HV72 Cluster: Poly(A) polymerase; n=30; cellular orga... 89 2e-16
UniRef50_Q093R8 Cluster: Poly(A) polymerase; n=2; Cystobacterine... 89 2e-16
UniRef50_Q9Z6U2 Cluster: Poly A Polymerase; n=9; Chlamydiaceae|R... 88 2e-16
UniRef50_Q6YRB3 Cluster: TRNA nucleotidyltransferase/polyA polym... 88 2e-16
UniRef50_A5CWU4 Cluster: Poly(A) polymerase; n=2; sulfur-oxidizi... 88 2e-16
UniRef50_A4E6N1 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q9JZY9 Cluster: PolyA polymerase; n=4; Neisseria|Rep: P... 88 3e-16
UniRef50_Q1Q5Z9 Cluster: Similar to poly(A) polymerase; n=2; Can... 88 3e-16
UniRef50_Q1NNS3 Cluster: Poly(A) polymerase, PcnB; n=2; delta pr... 88 3e-16
UniRef50_O83294 Cluster: Polynucleotide adenylyltransferase; n=1... 87 4e-16
UniRef50_A1RG69 Cluster: Poly(A) polymerase; n=15; Gammaproteoba... 87 4e-16
UniRef50_A6T217 Cluster: Poly(A) polymerase; n=11; Betaproteobac... 87 6e-16
UniRef50_A6FZN1 Cluster: Poly(A) polymerase; n=1; Plesiocystis p... 87 7e-16
UniRef50_A0LF07 Cluster: Polynucleotide adenylyltransferase regi... 87 7e-16
UniRef50_A6DGQ3 Cluster: RNA-poly(A) polymerase; n=1; Lentisphae... 86 1e-15
UniRef50_Q9F7R3 Cluster: Predicted poly(A) polymerase; n=1; uncu... 85 2e-15
UniRef50_Q8RJX5 Cluster: Polynucleotide adenyltransferase; n=4; ... 85 2e-15
UniRef50_A6P236 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q6F852 Cluster: Poly(A) polymerase I; n=2; Acinetobacte... 85 2e-15
UniRef50_Q39ZX1 Cluster: Poly(A) polymerase; n=2; Desulfuromonad... 85 2e-15
UniRef50_A6W2I1 Cluster: Poly(A) polymerase; n=4; Oceanospirilla... 85 2e-15
UniRef50_Q31FF3 Cluster: Poly(A) polymerase; n=1; Thiomicrospira... 85 3e-15
UniRef50_A5WHD2 Cluster: Poly(A) polymerase; n=3; Psychrobacter|... 85 3e-15
UniRef50_Q8ZRQ8 Cluster: Poly(A) polymerase; n=89; Proteobacteri... 84 5e-15
UniRef50_Q83EM9 Cluster: PolyA polymerase; n=3; Coxiella burneti... 83 1e-14
UniRef50_P44439 Cluster: Probable poly(A) polymerase; n=24; Gamm... 83 1e-14
UniRef50_Q057U5 Cluster: Poly(A) polymerase I; n=1; Buchnera aph... 82 2e-14
UniRef50_Q605H2 Cluster: PolyA polymerase; n=2; Gammaproteobacte... 80 6e-14
UniRef50_Q2LST9 Cluster: Poly A polymerase; n=1; Syntrophus acid... 78 3e-13
UniRef50_Q2J4B5 Cluster: Metal dependent phosphohydrolase; n=40;... 78 3e-13
UniRef50_Q4JSD7 Cluster: TRNA nucleotidyltransferase; n=1; Coryn... 77 5e-13
UniRef50_A6PUV6 Cluster: Poly(A) polymerase precursor; n=1; Vict... 77 5e-13
UniRef50_Q19Y52 Cluster: Gp8; n=1; Mycobacterium phage Wildcat|R... 76 1e-12
UniRef50_Q6MHS6 Cluster: Poly(A) polymerase; n=1; Bdellovibrio b... 75 2e-12
UniRef50_A5EWQ4 Cluster: Poly(A) polymerase PcnB; n=1; Dicheloba... 75 3e-12
UniRef50_Q0AB71 Cluster: Poly(A) polymerase; n=1; Alkalilimnicol... 74 4e-12
UniRef50_Q44038 Cluster: ORFIII; n=1; Acidaminococcus fermentans... 73 7e-12
UniRef50_Q73LY6 Cluster: PolyA polymerase family protein; n=1; T... 73 1e-11
UniRef50_Q6M1D4 Cluster: POLYA POLYMERASE; n=11; Corynebacterine... 73 1e-11
UniRef50_Q67QK4 Cluster: Putative RNA nucleotidyltransferase; n=... 72 2e-11
UniRef50_A4M1T5 Cluster: Polynucleotide adenylyltransferase regi... 71 4e-11
UniRef50_A5UUL6 Cluster: Polynucleotide adenylyltransferase/meta... 71 5e-11
UniRef50_Q5WGA1 Cluster: CCA-adding enzyme; n=1; Bacillus clausi... 70 7e-11
UniRef50_Q9CP21 Cluster: Multifunctional CCA protein [Includes: ... 69 2e-10
UniRef50_Q9KC89 Cluster: CCA-adding enzyme; n=1; Bacillus halodu... 69 2e-10
UniRef50_Q7XV96 Cluster: OSJNBb0039F02.3 protein; n=3; Oryza sat... 68 3e-10
UniRef50_A7HLG0 Cluster: Polynucleotide adenylyltransferase regi... 68 4e-10
UniRef50_A6TR64 Cluster: Polynucleotide adenylyltransferase regi... 68 4e-10
UniRef50_A0RPP8 Cluster: PolyA polymerase family protein; n=1; C... 67 5e-10
UniRef50_Q74CU0 Cluster: PolyA polymerase family protein; n=5; D... 66 9e-10
UniRef50_Q8A6B0 Cluster: TRNA nucleotidyltransferase; n=10; Bact... 66 1e-09
UniRef50_Q8SS78 Cluster: TRNA ADENILYL TRANSFERASE; n=1; Encepha... 66 1e-09
UniRef50_A4J3L2 Cluster: Polynucleotide adenylyltransferase regi... 66 1e-09
UniRef50_Q10S77 Cluster: PolyA polymerase family protein, expres... 66 1e-09
UniRef50_Q3A9F0 Cluster: PolyA polymerase/tRNA nucleotidyltransf... 65 3e-09
UniRef50_Q0AVZ3 Cluster: TRNA nucleotidyltransferase; n=2; Syntr... 65 3e-09
UniRef50_O97001 Cluster: Possible tRNA nucleotidyltransferase; n... 64 6e-09
UniRef50_Q5NIG4 Cluster: CCA-adding enzyme; n=12; Francisella tu... 64 6e-09
UniRef50_A6Q2Y3 Cluster: RNA nucleotidyltransferase; n=1; Nitrat... 62 1e-08
UniRef50_A3DD90 Cluster: Polynucleotide adenylyltransferase regi... 62 1e-08
UniRef50_Q7U350 Cluster: CCA-adding enzyme; n=2; Candidatus Bloc... 62 1e-08
UniRef50_Q76YD7 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_P45269 Cluster: Multifunctional CCA protein [Includes: ... 62 2e-08
UniRef50_A3JBM7 Cluster: Fused tRNA nucleotidyl transferase/2'3'... 62 2e-08
UniRef50_A7GXZ4 Cluster: PolyA polymerase family protein; n=2; C... 61 3e-08
UniRef50_Q3E7W1 Cluster: Uncharacterized protein At1g28090.1; n=... 61 3e-08
UniRef50_Q191T3 Cluster: Polynucleotide adenylyltransferase regi... 61 4e-08
UniRef50_Q1QC26 Cluster: Polynucleotide adenylyltransferase regi... 60 6e-08
UniRef50_A2DV13 Cluster: PolyA polymerase family protein; n=1; T... 60 6e-08
UniRef50_A0L6A0 Cluster: Polynucleotide adenylyltransferase regi... 60 7e-08
UniRef50_O66728 Cluster: Poly A polymerase; n=1; Aquifex aeolicu... 60 1e-07
UniRef50_A6VU49 Cluster: Polynucleotide adenylyltransferase regi... 60 1e-07
UniRef50_Q4DE28 Cluster: TRNA nucleotidyltransferase, putative; ... 60 1e-07
UniRef50_Q62HE1 Cluster: PolyA polymerase; n=45; cellular organi... 59 1e-07
UniRef50_Q3AAR6 Cluster: PolyA polymerase family protein; n=1; C... 59 1e-07
UniRef50_A3WPG7 Cluster: TRNA nucleotidyltransferase; n=1; Idiom... 59 1e-07
UniRef50_A0XYS5 Cluster: TRNA nucleotidyl transferase; n=2; Alte... 59 1e-07
UniRef50_A4RUG6 Cluster: Predicted protein; n=2; Ostreococcus|Re... 59 1e-07
UniRef50_A4RHL3 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_UPI00006CBA87 Cluster: polyA polymerase family protein;... 59 2e-07
UniRef50_A0BX57 Cluster: Chromosome undetermined scaffold_133, w... 59 2e-07
UniRef50_Q9WZH4 Cluster: TRNA nucleotidyl transferase-related pr... 58 2e-07
UniRef50_Q88QU2 Cluster: Multifunctional CCA protein [Includes: ... 58 2e-07
UniRef50_A6DBJ0 Cluster: Putative RNA nucleotidyltransferase; n=... 58 3e-07
UniRef50_Q8VXU8 Cluster: AT5g23690/MQM1_4; n=5; core eudicotyled... 58 3e-07
UniRef50_A2FXY8 Cluster: PolyA polymerase family protein; n=2; T... 58 3e-07
UniRef50_Q5KM57 Cluster: TRNA adenylyltransferase, putative; n=2... 58 3e-07
UniRef50_Q2ACT2 Cluster: CBS:Phosphoesterase, RecJ-like:Polynucl... 57 5e-07
UniRef50_A4T0E4 Cluster: Polynucleotide adenylyltransferase regi... 57 5e-07
UniRef50_Q8D2W4 Cluster: CCA-adding enzyme; n=1; Wigglesworthia ... 57 5e-07
UniRef50_Q747L5 Cluster: PolyA polymerase; n=4; Desulfuromonadal... 57 7e-07
UniRef50_Q058D0 Cluster: TRNA nucleotidyltransferase; n=1; Buchn... 57 7e-07
UniRef50_A6Q8W0 Cluster: Polynucleotide adenylyltransferase/meta... 57 7e-07
UniRef50_A6FG51 Cluster: Putative tRNA nucleotidyltransferase; n... 57 7e-07
UniRef50_UPI00004993B2 Cluster: tRNA nucleotidyltransferase; n=1... 56 9e-07
UniRef50_Q5QY23 Cluster: CCA-adding enzyme; n=1; Idiomarina loih... 56 9e-07
UniRef50_O83605 Cluster: Polynucleotide adenylyltransferase; n=1... 56 1e-06
UniRef50_Q18YC7 Cluster: Polynucleotide adenylyltransferase regi... 56 1e-06
UniRef50_A7I2S1 Cluster: PolyA polymerase family protein; n=1; C... 56 1e-06
UniRef50_A4M1Z9 Cluster: Poly(A) polymerase; n=1; Geobacter bemi... 56 1e-06
UniRef50_Q94K06 Cluster: TRNA adenylyltransferase-like protein; ... 56 1e-06
UniRef50_Q7SAL9 Cluster: Putative uncharacterized protein NCU080... 56 1e-06
UniRef50_A0L904 Cluster: Polynucleotide adenylyltransferase regi... 56 2e-06
UniRef50_UPI0000DAE580 Cluster: hypothetical protein Rgryl_01000... 55 2e-06
UniRef50_Q6ASD5 Cluster: Related to poly(A) polymerase; n=1; Des... 55 2e-06
UniRef50_A4B002 Cluster: TRNA nucleotidyltransferase; n=1; Alter... 55 2e-06
UniRef50_Q60CQ4 Cluster: Multifunctional CCA protein [Includes: ... 55 2e-06
UniRef50_Q8R5U9 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 55 3e-06
UniRef50_Q30UP5 Cluster: Polynucleotide adenylyltransferase regi... 55 3e-06
UniRef50_A4J0V4 Cluster: Metal dependent phosphohydrolase; n=1; ... 55 3e-06
UniRef50_Q5AME1 Cluster: Potential tRNA CCA-pyrophosphorylase; n... 55 3e-06
UniRef50_Q820V9 Cluster: CCA-adding enzyme; n=2; Coxiella burnet... 55 3e-06
UniRef50_Q63YC3 Cluster: Multifunctional CCA protein [Includes: ... 55 3e-06
UniRef50_UPI0000E0E587 Cluster: tRNA nucleotidyltransferase; n=1... 54 4e-06
UniRef50_A0Z6Y3 Cluster: TRNA nucleotidyltransferase, putative; ... 54 4e-06
UniRef50_UPI0000DAE6D1 Cluster: hypothetical protein Rgryl_01001... 54 5e-06
UniRef50_Q3ZZE1 Cluster: PolyA polymerase family protein; n=3; D... 54 5e-06
UniRef50_A5EXT8 Cluster: TRNA nucleotidyltransferase; n=1; Diche... 54 5e-06
UniRef50_UPI0000499291 Cluster: tRNA nucleotidyltransferase; n=1... 54 6e-06
UniRef50_Q7NKM4 Cluster: Gll1453 protein; n=1; Gloeobacter viola... 54 6e-06
UniRef50_Q39TB4 Cluster: Polynucleotide adenylyltransferase regi... 54 6e-06
UniRef50_Q1NKC6 Cluster: CBS:Phosphoesterase, RecJ-like:Polynucl... 54 6e-06
UniRef50_A7T930 Cluster: Predicted protein; n=1; Nematostella ve... 54 6e-06
UniRef50_Q6LV05 Cluster: Multifunctional CCA protein [Includes: ... 54 6e-06
UniRef50_Q7M883 Cluster: RNA NUCLEOTIDYLTRANSFERASE; n=1; Woline... 53 8e-06
UniRef50_Q2LR14 Cluster: TRNA nucleotidyltransferase; n=1; Syntr... 53 8e-06
UniRef50_A2GDE2 Cluster: PolyA polymerase family protein; n=1; T... 53 8e-06
UniRef50_Q7MW45 Cluster: PolyA polymerase family protein; n=19; ... 53 1e-05
UniRef50_Q3EZB5 Cluster: TRNA nucleotidyltransferase; n=1; Bacil... 53 1e-05
UniRef50_A6GB74 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_A4M1Z2 Cluster: Metal dependent phosphohydrolase; n=1; ... 53 1e-05
UniRef50_A0LG26 Cluster: Polynucleotide adenylyltransferase regi... 53 1e-05
UniRef50_Q2BK09 Cluster: TRNA nucleotidyl transferase; n=1; Nept... 52 1e-05
UniRef50_A3LSZ1 Cluster: Predicted protein; n=2; Saccharomycetac... 52 1e-05
UniRef50_A1C7Z8 Cluster: Poly(A) polymerase; n=8; Eurotiomycetid... 52 1e-05
UniRef50_A5G663 Cluster: Polynucleotide adenylyltransferase regi... 52 2e-05
UniRef50_UPI00015BD2D0 Cluster: UPI00015BD2D0 related cluster; n... 51 3e-05
UniRef50_A7BYS7 Cluster: PolyA polymerase; n=1; Beggiatoa sp. PS... 51 5e-05
UniRef50_A0Y839 Cluster: TRNA nucleotidyltransferase, putative; ... 51 5e-05
UniRef50_Q8GZ55 Cluster: Putative poly(A) polymerase; n=3; Arabi... 51 5e-05
UniRef50_A5WEX7 Cluster: tRNA cytidylyltransferase; n=1; Psychro... 50 6e-05
UniRef50_A7BYS8 Cluster: Poly(A) polymerase; n=1; Beggiatoa sp. ... 50 8e-05
UniRef50_Q74ZT0 Cluster: AGR118Wp; n=1; Eremothecium gossypii|Re... 50 8e-05
UniRef50_Q8KDQ5 Cluster: PolyA polymerase family protein; n=10; ... 50 1e-04
UniRef50_A1IDZ7 Cluster: PolyA polymerase family protein; n=1; C... 50 1e-04
UniRef50_Q7U391 Cluster: CCA-adding enzyme; n=4; Bordetella|Rep:... 50 1e-04
UniRef50_Q9UTQ0 Cluster: Probable tRNA nucleotidyltransferase; n... 50 1e-04
UniRef50_A6GQU7 Cluster: Polynucleotide adenylyltransferase regi... 49 1e-04
UniRef50_UPI0000E87B3C Cluster: tRNA nucleotidyl transferase, pu... 49 2e-04
UniRef50_Q0AX27 Cluster: PolyA polymerase family protein precurs... 49 2e-04
UniRef50_A5UX62 Cluster: Polynucleotide adenylyltransferase regi... 49 2e-04
UniRef50_A7TSN1 Cluster: Putative uncharacterized protein; n=1; ... 49 2e-04
UniRef50_Q8R5S7 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 48 2e-04
UniRef50_Q72BI3 Cluster: PolyA polymerase family protein; n=3; D... 48 3e-04
UniRef50_A5K4L8 Cluster: tRNA nucleotidyltransferase, putative; ... 48 3e-04
UniRef50_Q6CSU9 Cluster: Similarity; n=2; Kluyveromyces lactis|R... 48 3e-04
UniRef50_A0Q0F2 Cluster: PolyA polymerase family protein, putati... 48 4e-04
UniRef50_Q89B06 Cluster: CCA-adding enzyme; n=3; Buchnera aphidi... 48 4e-04
UniRef50_Q97HE9 Cluster: TRNA nucleotidyltransferase family enzy... 47 6e-04
UniRef50_Q9Y7U9 Cluster: ATP(CTP) tRNA nucleotidyltransferase; n... 47 6e-04
UniRef50_Q1DJQ5 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_Q466Z1 Cluster: TRNA nucleotidyltransferase; n=1; Metha... 47 6e-04
UniRef50_Q1QZ27 Cluster: Polynucleotide adenylyltransferase regi... 47 7e-04
UniRef50_Q31Q46 Cluster: PolyA polymerase; n=2; Synechococcus el... 46 0.001
UniRef50_A4M812 Cluster: Polynucleotide adenylyltransferase regi... 46 0.001
UniRef50_Q4UBS4 Cluster: TRNA nucleotidyltransferase, putative; ... 46 0.001
UniRef50_Q2QX33 Cluster: TRNA-nucleotidyltransferase, putative, ... 46 0.001
UniRef50_Q9PDL7 Cluster: Multifunctional CCA protein [Includes: ... 46 0.001
UniRef50_Q2ADM5 Cluster: Polynucleotide adenylyltransferase regi... 46 0.002
UniRef50_Q7QTP5 Cluster: GLP_0_2580_4190; n=1; Giardia lamblia A... 45 0.002
UniRef50_Q1MRT2 Cluster: PolyA polymerase family protein; n=1; L... 44 0.004
UniRef50_A0H5A7 Cluster: Polynucleotide adenylyltransferase regi... 44 0.004
UniRef50_Q54BQ2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A7AWW8 Cluster: tRNA nucleotidyltransferase/poly(A) pol... 44 0.005
UniRef50_Q6CAF4 Cluster: Similar to sp|Q9P4S5 Candida glabrata t... 44 0.005
UniRef50_Q9RVP2 Cluster: TRNA nucleotidyltransferase, putative; ... 44 0.007
UniRef50_Q7TVB1 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 44 0.007
UniRef50_Q7NCQ4 Cluster: PolyA polymerase; n=1; Gloeobacter viol... 44 0.007
UniRef50_A1AQP2 Cluster: Metal dependent phosphohydrolase; n=4; ... 44 0.007
UniRef50_A0Q3L3 Cluster: PolyA polymerase family protein; n=1; C... 43 0.009
UniRef50_Q5CUP1 Cluster: Cca1p, tRNA adenylyltransferase; n=2; C... 43 0.009
UniRef50_A2FD21 Cluster: PolyA polymerase family protein; n=2; T... 43 0.009
UniRef50_P21269 Cluster: tRNA nucleotidyltransferase, mitochondr... 43 0.009
UniRef50_A1AVM9 Cluster: Polynucleotide adenylyltransferase regi... 42 0.021
UniRef50_A4S9V1 Cluster: Predicted protein; n=1; Ostreococcus lu... 42 0.021
UniRef50_Q55BE1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_A3ER54 Cluster: Putative poly(A) polymerase; n=1; Lepto... 42 0.028
UniRef50_A3S4H9 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 41 0.037
UniRef50_Q8IIG2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.037
UniRef50_Q4U9X9 Cluster: Cardiolipin synthetase, putative; n=2; ... 40 0.064
UniRef50_Q0UH04 Cluster: Putative uncharacterized protein; n=1; ... 40 0.064
UniRef50_Q1JYT1 Cluster: Polynucleotide adenylyltransferase regi... 40 0.085
UniRef50_A6TJG8 Cluster: Polynucleotide adenylyltransferase/meta... 40 0.085
UniRef50_Q7PDU7 Cluster: TRNA nucleotidyltransferase, mitochondr... 40 0.11
UniRef50_Q125I3 Cluster: Metal dependent phosphohydrolase; n=1; ... 38 0.45
UniRef50_Q67NF3 Cluster: Putative poly A polymerase; n=1; Symbio... 36 1.0
UniRef50_A2BUB7 Cluster: Poly A polymerase family; n=5; Prochlor... 36 1.0
UniRef50_Q5WEY2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q2JHW1 Cluster: PolyA polymerase family protein; n=3; S... 36 1.4
UniRef50_Q3DYR1 Cluster: Polynucleotide adenylyltransferase regi... 36 1.8
UniRef50_A1IAH3 Cluster: Poly(A) polymerase-like protein; n=1; C... 35 2.4
UniRef50_A5DK71 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q30ZL6 Cluster: TRNA nucleotidyltransferase, putative; ... 35 3.2
UniRef50_Q1NUR4 Cluster: Polynucleotide adenylyltransferase regi... 35 3.2
UniRef50_Q9RV39 Cluster: TRNA nucleotidyltransferase/poly A poly... 34 4.2
UniRef50_Q8DLH3 Cluster: Tll0519 protein; n=4; Cyanobacteria|Rep... 34 4.2
UniRef50_Q9KBJ7 Cluster: Intracellular alkaline serine protease;... 34 5.6
UniRef50_A6EHJ3 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_A5FSC5 Cluster: Polynucleotide adenylyltransferase/meta... 34 5.6
UniRef50_A1ZZX5 Cluster: Two component regulator three Y motif f... 34 5.6
UniRef50_Q00SN8 Cluster: Polynucleotide adenylyltransferase fami... 34 5.6
UniRef50_Q22BM8 Cluster: HAD-superfamily hydrolase, subfamily II... 34 5.6
UniRef50_Q1VKP5 Cluster: Poly(A) polymerase; n=1; Psychroflexus ... 33 7.4
UniRef50_A4WCX8 Cluster: Radical SAM domain protein precursor; n... 33 7.4
UniRef50_A2U9J7 Cluster: CDP-glycerol:poly(Glycerophosphate) gly... 33 7.4
UniRef50_A0YS97 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q2RIR3 Cluster: Polynucleotide adenylyltransferase regi... 33 9.7
UniRef50_A7AY03 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q5V3G1 Cluster: Cell surface glycoprotein related prote... 33 9.7
>UniRef50_UPI0000D568E8 Cluster: PREDICTED: similar to CG2100-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG2100-PA - Tribolium castaneum
Length = 405
Score = 351 bits (863), Expect = 1e-95
Identities = 163/224 (72%), Positives = 188/224 (83%)
Frame = +3
Query: 210 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 389
K RENP++ K+DSP+F S+FT+E+ L +F +Y +EIRIAGGAVRDLL GL P DLDFA
Sbjct: 5 KSRENPVIFKLDSPDFHSLFTDELKTLASMFKRYGYEIRIAGGAVRDLLSGLRPTDLDFA 64
Query: 390 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 569
TTATP +MKEMFTAE VRMIN+NGE+HGTIT RINDKENFEVTTLRID+VTDGR A+VQF
Sbjct: 65 TTATPVQMKEMFTAENVRMINMNGEKHGTITPRINDKENFEVTTLRIDVVTDGRRAEVQF 124
Query: 570 TKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMR 749
T DW LDA RRDLTINSMFL F+G+VYDYFYGYEDL+ +V FVGD R+KEDYLRI+R
Sbjct: 125 TTDWLLDALRRDLTINSMFLDFEGAVYDYFYGYEDLKVHKVQFVGDAATRIKEDYLRILR 184
Query: 750 YFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
YFRFYGRIA + D HEE TL ++ N GLGNISGERIW EL+K
Sbjct: 185 YFRFYGRIAKEADKHEEGTLNAIRENKEGLGNISGERIWMELRK 228
>UniRef50_Q9VNH2 Cluster: CG2100-PA; n=9; Coelomata|Rep: CG2100-PA -
Drosophila melanogaster (Fruit fly)
Length = 477
Score = 350 bits (861), Expect = 2e-95
Identities = 158/224 (70%), Positives = 189/224 (84%)
Frame = +3
Query: 210 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 389
+ R NP KV +PEFKSIFT E+ DL +F KY +E+RIAGGAVRD+LMG+ PKD+D A
Sbjct: 53 RMRTNPAFRKVATPEFKSIFTPELNDLVALFKKYDYELRIAGGAVRDILMGIPPKDIDLA 112
Query: 390 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 569
TTATP++MK+MF EEVRMIN NGE+HGTIT RINDKENFEVTTLRID+ TDGR A+V +
Sbjct: 113 TTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDIRTDGRHAEVMY 172
Query: 570 TKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMR 749
T DW+LDANRRDLTINSMFLGFDG+VYDYFYGY+DLQ+RRV FVG+ D+R+KED+LRI+R
Sbjct: 173 TTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDDLQERRVVFVGEADIRIKEDFLRILR 232
Query: 750 YFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
YFRFYGRIA + +NH++ TL +K N GL ISGERIW EL+K
Sbjct: 233 YFRFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQK 276
>UniRef50_UPI00015B5D79 Cluster: PREDICTED: similar to
ENSANGP00000010598; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000010598 - Nasonia
vitripennis
Length = 575
Score = 341 bits (839), Expect = 1e-92
Identities = 159/216 (73%), Positives = 181/216 (83%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
+K+DSPEFKSIFT E+ L IF ++ +E+R+AGGAVRD+LMG PKDLDFATTATP EM
Sbjct: 8 MKLDSPEFKSIFTPELNTLSDIFKRHNYELRVAGGAVRDILMGKHPKDLDFATTATPVEM 67
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
KEMFT EEVRMIN NGE+HGTIT+RINDKENFEVTTLR+D+VTDGR ADV FT DW LDA
Sbjct: 68 KEMFTKEEVRMINCNGEKHGTITSRINDKENFEVTTLRVDVVTDGRHADVVFTTDWLLDA 127
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
+RRDLTINSMFL DG VYDYFYGY+DL KRRVAFVG+P R+ ED+LRI RYFRFYGRI
Sbjct: 128 SRRDLTINSMFLDLDGKVYDYFYGYDDLMKRRVAFVGEPAQRICEDFLRIFRYFRFYGRI 187
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
A PDNH+E+T+ +K NV GL ISGERIW E K
Sbjct: 188 ADVPDNHDEKTITAIKENVKGLEIISGERIWSEWSK 223
>UniRef50_UPI0000DB7A53 Cluster: PREDICTED: similar to CG2100-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG2100-PA
- Apis mellifera
Length = 395
Score = 338 bits (831), Expect = 1e-91
Identities = 153/222 (68%), Positives = 182/222 (81%)
Frame = +3
Query: 216 RENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATT 395
R NP++ K+D+P F SIFT E+ L ++F KY +E++IAGGAVRD+LM + P DLDFAT
Sbjct: 10 RSNPVIKKLDNPLFHSIFTPELNILAELFKKYNYELKIAGGAVRDILMDIKPLDLDFATD 69
Query: 396 ATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTK 575
ATPEEMK MF E VRMIN GERHGTITARINDK+NFE+TTLRID TDGR+A ++FTK
Sbjct: 70 ATPEEMKTMFVKENVRMINNRGERHGTITARINDKQNFEITTLRIDTHTDGRYAKIKFTK 129
Query: 576 DWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYF 755
DWKLDA RRDLTINSMFL F+G +YDYF+GY+DLQKRRV FVG+P R+KEDYLRI+RYF
Sbjct: 130 DWKLDALRRDLTINSMFLDFEGKIYDYFFGYDDLQKRRVVFVGNPSHRIKEDYLRILRYF 189
Query: 756 RFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
RFYGRIA +PD H+E T+ +K N+HGL ISGERIW E K
Sbjct: 190 RFYGRIAEQPDVHDESTIIAIKENIHGLQRISGERIWSEWSK 231
>UniRef50_UPI0000E49DF6 Cluster: PREDICTED: similar to Chain A,
Crystal Structure Of Human Cca-Adding Enzyme; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Chain A, Crystal Structure Of Human Cca-Adding Enzyme -
Strongylocentrotus purpuratus
Length = 407
Score = 308 bits (757), Expect = 1e-82
Identities = 138/216 (63%), Positives = 176/216 (81%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
+K+DSPEF+ +FT E+ L ++F++Y++E+RIAGGAVRDLL P+D+DFAT ATP++M
Sbjct: 67 MKIDSPEFRGLFTPELKQLAELFERYQYELRIAGGAVRDLLTKKQPQDVDFATIATPDQM 126
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
KEMFT E +RMIN GE+HGTITARINDKENFE+TTLRID VTDGR A+V+FT DW+ DA
Sbjct: 127 KEMFTKEGIRMINAKGEKHGTITARINDKENFEITTLRIDRVTDGRHAEVEFTTDWRTDA 186
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRDLTINSMFLG DG++YD+F G E L++ +AFVG+ R++EDYLRI+RYFRFYGRI
Sbjct: 187 ERRDLTINSMFLGLDGTLYDFFNGKEALERCHIAFVGNAATRIQEDYLRILRYFRFYGRI 246
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
A + + H ETL ++ N HGL ISGERIW E++K
Sbjct: 247 ARESNKHTPETLQSIRENGHGLAGISGERIWMEVRK 282
>UniRef50_Q96Q11 Cluster: tRNA-nucleotidyltransferase 1,
mitochondrial precursor; n=37; Deuterostomia|Rep:
tRNA-nucleotidyltransferase 1, mitochondrial precursor -
Homo sapiens (Human)
Length = 434
Score = 302 bits (742), Expect = 6e-81
Identities = 139/216 (64%), Positives = 174/216 (80%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
+K+ SPEF+S+FTE + L ++F K HE+RIAGGAVRDLL G+ P+D+DFATTATP +M
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
KEMF + +RMIN GE+HGTITAR+++ ENFE+TTLRID+ TDGR A+V+FT DW+ DA
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHE-ENFEITTLRIDVTTDGRHAEVEFTTDWQKDA 148
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRDLTINSMFLGFDG+++DYF GYEDL+ ++V FVG R++EDYLRI+RYFRFYGRI
Sbjct: 149 ERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 208
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
KP +H+ ETL + N GL ISGERIW ELKK
Sbjct: 209 VDKPGDHDPETLEAIAENAKGLAGISGERIWVELKK 244
>UniRef50_Q93795 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 436
Score = 277 bits (679), Expect = 3e-73
Identities = 124/219 (56%), Positives = 168/219 (76%)
Frame = +3
Query: 225 PIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATP 404
P +K+D+ +F+++FT +++ L+ +F K +E+RIAGGAVRDLLM + P D+DFA+TATP
Sbjct: 6 PTTMKIDNEDFRTLFTPQLLKLRDLFAKRNYELRIAGGAVRDLLMNIRPADVDFASTATP 65
Query: 405 EEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWK 584
+MKEMF +++RM++ GE HGTIT RI+D ENFE+TTLR+D+V DGR A V++T DW+
Sbjct: 66 TQMKEMFEEDKIRMLHKRGEEHGTITCRIDDCENFEITTLRVDIVCDGRRAQVEYTTDWQ 125
Query: 585 LDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFY 764
LDANRRDLTINS+FL G+V DYF G D++ RR+AFVGD R++EDYLRI+RYFRF+
Sbjct: 126 LDANRRDLTINSLFLDLHGNVVDYFGGIRDIETRRIAFVGDARQRIQEDYLRILRYFRFF 185
Query: 765 GRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
GRI+ HE +T+ + N G+ IS ERIW ELKK
Sbjct: 186 GRIS-DCTEHEHDTIQAIVENKDGMAGISAERIWTELKK 223
>UniRef50_A7RRV1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 414
Score = 258 bits (632), Expect = 1e-67
Identities = 126/216 (58%), Positives = 158/216 (73%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
I D+ FK+I T E++ L +F K+ +E+RI GGAVRDLLMG PKD+D T ATPE+M
Sbjct: 6 ILADTEGFKAIHTPELLRLSSVFTKHGYELRIVGGAVRDLLMGKLPKDIDLCTNATPEQM 65
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
+MF EE+R I G +HGT+TA IN K +FEVTTLRID+ TDGR A V+FT DW+LDA
Sbjct: 66 IKMFKDEEIRCIET-GLQHGTLTAHIN-KTDFEVTTLRIDVETDGRHAKVKFTNDWQLDA 123
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRDLT N+M + G++YDYF G DL+K V FVGD +R+KEDYLRI+RYFRFYG+I
Sbjct: 124 ERRDLTFNAMSVDLTGNLYDYFNGEIDLRKGHVRFVGDARLRIKEDYLRILRYFRFYGKI 183
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
A +PDNH+ +TL V+K GL IS ERIW E+ K
Sbjct: 184 ATEPDNHDPDTLAVIKELAEGLRIISVERIWLEVSK 219
>UniRef50_Q5C3N6 Cluster: SJCHGC09232 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09232 protein - Schistosoma
japonicum (Blood fluke)
Length = 217
Score = 192 bits (469), Expect = 8e-48
Identities = 88/133 (66%), Positives = 107/133 (80%)
Frame = +3
Query: 240 VDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKE 419
+D F ++TEE I + KIF KY +RIAGGAVRD+L+G++P D+DFAT ATP +M E
Sbjct: 51 IDLTPFPELYTEENITVHKIFKKYGFNLRIAGGAVRDILLGVSPHDIDFATDATPSQMCE 110
Query: 420 MFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANR 599
MF+ E +RM+N NGE HGT+TARINDKENFEVTTLRID+VTDGR ++V FT DWKLDA R
Sbjct: 111 MFSKEGIRMLNRNGESHGTVTARINDKENFEVTTLRIDVVTDGRHSEVIFTNDWKLDAER 170
Query: 600 RDLTINSMFLGFD 638
RDLT+NSMFL D
Sbjct: 171 RDLTVNSMFLSVD 183
>UniRef50_Q40IR0 Cluster: Polynucleotide adenylyltransferase; n=8;
Rickettsiales|Rep: Polynucleotide adenylyltransferase -
Ehrlichia chaffeensis str. Sapulpa
Length = 401
Score = 169 bits (411), Expect = 8e-41
Identities = 86/206 (41%), Positives = 128/206 (62%)
Frame = +3
Query: 264 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 443
I E ++ + K++ +IR+ GG VRD L+ D+DFATT P + TA ++
Sbjct: 6 INNENILLIINAIKKFQGDIRLVGGCVRDSLLKRQTIDIDFATTLLPNQTINALTAAHIK 65
Query: 444 MINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 623
I G +HGTITA +N+ +E+TTLR D+ DGR A+V+FT +W+ DA+RRD T N++
Sbjct: 66 AIPT-GIKHGTITALVNNTA-YEITTLRSDISCDGRHAEVKFTNNWQQDASRRDFTFNAL 123
Query: 624 FLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEE 803
+ G VYDYF G +DL+K+ + F+GDP++R++EDYLRI+R FRFY I + +E
Sbjct: 124 YCDEKGIVYDYFSGIQDLEKKHLNFIGDPEIRIQEDYLRILRAFRFYASICSQNKLSDEI 183
Query: 804 TLXVLKNNVHGLGNISGERIWGELKK 881
K + + + N+S ERI E K
Sbjct: 184 VHSCTKYSSY-INNLSRERIRDEFFK 208
>UniRef50_Q2GDC2 Cluster: PolyA polymerase family protein; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: PolyA
polymerase family protein - Neorickettsia sennetsu
(strain Miyayama)
Length = 392
Score = 166 bits (403), Expect = 8e-40
Identities = 90/205 (43%), Positives = 118/205 (57%)
Frame = +3
Query: 267 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRM 446
+TE++ L +I E R GG VRD L+G D+D ATT PEE +
Sbjct: 7 WTEDLRTLVQIIRNNGGEARFVGGCVRDQLLGRKISDIDLATTLKPEEAIRALKTNGLVT 66
Query: 447 INVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMF 626
I G +HGT T +N + E+TTLR D+ DGR A V FT WK DA RRD T N+M+
Sbjct: 67 IPT-GLKHGTFTVLVNSRP-IEITTLRQDLHCDGRHATVSFTDSWKEDAQRRDFTFNAMY 124
Query: 627 LGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
+ +G+++DYF G EDLQ RR+ FVG+P R++EDYLRI+R FRF I P EE
Sbjct: 125 IDIEGNIHDYFSGLEDLQNRRLKFVGEPHQRIEEDYLRILRAFRFQASICKTP--LSEEI 182
Query: 807 LXVLKNNVHGLGNISGERIWGELKK 881
L + ++SGERI GE+ K
Sbjct: 183 LHACTKYRKKISSLSGERIQGEMFK 207
>UniRef50_Q4FPG1 Cluster: Poly(A) Polymerase; n=3; Bacteria|Rep:
Poly(A) Polymerase - Pelagibacter ubique
Length = 424
Score = 165 bits (400), Expect = 2e-39
Identities = 85/212 (40%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Frame = +3
Query: 255 FKSIFTE-EVIDLKKIFDKYKH--EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 425
FK+I E EV + + Y EIR GG VR ++ D+D A P+E+ E
Sbjct: 22 FKNIKKETEVSKIFEAIHSYSSNSEIRYVGGCVRKIINKEAYDDIDLAVNLNPKEVCEAL 81
Query: 426 TAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRD 605
T ++++ +G HGTITA IND + FE+T+LR D+ TDGR A V+F+ WK DA+RRD
Sbjct: 82 TKKDIKYYE-SGIEHGTITALINDIK-FEITSLRKDIDTDGRHAKVEFSDSWKEDASRRD 139
Query: 606 LTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKP 785
TINS++ +GS++D F G +DL++ ++ F+G+ + R+KEDYLR++RY RF+ ++
Sbjct: 140 FTINSIYADIEGSLFDPFDGKKDLERGKINFIGNVETRIKEDYLRVLRYVRFF--LSYSK 197
Query: 786 DNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+H+ + + +K N+ G+ +IS ER+ E +K
Sbjct: 198 HSHDPQVIKAIKKNLSGVSSISSERLIDEFQK 229
>UniRef50_Q0ARR5 Cluster: Polynucleotide adenylyltransferase region;
n=1; Maricaulis maris MCS10|Rep: Polynucleotide
adenylyltransferase region - Maricaulis maris (strain
MCS10)
Length = 419
Score = 157 bits (382), Expect = 3e-37
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 3/191 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E R GG VR+ L+G D+D AT P+++ A ++ + G+ HGTIT + D
Sbjct: 39 ESRFVGGCVRNALLGEPVADIDIATQLDPDQVIAAAKAAGLKPVPT-GKAHGTITV-VCD 96
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
+ FEVT+LR D+ TDGR A V FT+DW DA RRD +N+++ DG+V+D G +D+
Sbjct: 97 GQPFEVTSLRRDVATDGRRAVVSFTRDWAEDAKRRDFRLNALYADADGTVFDPTGGLKDV 156
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRF---YGRIALKPDNHEEETLXVLKNNVHGLGNI 848
+ RR FVGDP++R++EDYLRI+R FRF YGR A PD E VLK+ GL +
Sbjct: 157 ENRRFVFVGDPEMRIREDYLRILRLFRFEAWYGRGA--PD--EAAMAAVLKHR-EGLHKL 211
Query: 849 SGERIWGELKK 881
S ER+W ELKK
Sbjct: 212 SVERVWAELKK 222
>UniRef50_Q8FZD7 Cluster: PolyA polymerase family protein; n=13;
Rhizobiales|Rep: PolyA polymerase family protein -
Brucella suis
Length = 423
Score = 153 bits (372), Expect = 4e-36
Identities = 81/188 (43%), Positives = 110/188 (58%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E R+ GGAVR+ L+G D+D ATT PEE + + + + G HGTIT +
Sbjct: 32 EARVVGGAVRNTLLGTGVSDVDLATTHLPEETVRLASEAGFKPVPT-GMEHGTITVVVQG 90
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
FEVTTLR D+ T+GR A V F DWK DA RRD TIN++++ DG+V D G D+
Sbjct: 91 YP-FEVTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYVTADGTVIDQVGGLADI 149
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
+ R + F+GD + R++EDYLRI+R+FRF+ E E L G+ +S E
Sbjct: 150 ETRTLRFIGDAEQRIREDYLRILRFFRFFAWYG--SGRPEAEGLRASARLKDGIAQLSAE 207
Query: 858 RIWGELKK 881
RIW E+KK
Sbjct: 208 RIWSEMKK 215
>UniRef50_A3VV21 Cluster: Possible poly(A) polymerase; n=1;
Parvularcula bermudensis HTCC2503|Rep: Possible poly(A)
polymerase - Parvularcula bermudensis HTCC2503
Length = 398
Score = 153 bits (372), Expect = 4e-36
Identities = 86/193 (44%), Positives = 113/193 (58%), Gaps = 5/193 (2%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTP-----KDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT 482
E R GG +RD L+G P D+D ATT PEE ++ +R+I G HGT+T
Sbjct: 26 EARFVGGCIRDSLLGQPPGAAGHTDIDIATTLLPEETLKLLGRHGIRVIPT-GLEHGTVT 84
Query: 483 ARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFY 662
A ++ FE+TTLR D+ TDGR A V FT+DW+ DA RRD TIN++ L +G +YDY
Sbjct: 85 AVLSAVP-FEITTLRCDVATDGRHATVSFTEDWEKDAARRDFTINALSLDKEGRLYDYHD 143
Query: 663 GYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLG 842
G DL RRV F+G P R+KEDYLRI+R+ RF R D + L GL
Sbjct: 144 GRADLMARRVRFIGRPAQRIKEDYLRILRFMRFSARFGGTLDVAGWQASEALAG---GLL 200
Query: 843 NISGERIWGELKK 881
++S ERIW E+ +
Sbjct: 201 HLSKERIWSEVSR 213
>UniRef50_Q89SD1 Cluster: Poly(A) polymerase; n=11;
Bradyrhizobiaceae|Rep: Poly(A) polymerase -
Bradyrhizobium japonicum
Length = 418
Score = 151 bits (367), Expect = 2e-35
Identities = 85/189 (44%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E R+ GGAVR+ L+GL P D+D ATTA PEE+ A ++ + G HGT+T I D
Sbjct: 31 EARVVGGAVRNALLGLVPGDIDIATTARPEEVVRRAKAAGIKSVPT-GIDHGTVTLVI-D 88
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
+EVTTLR D T GR A V F +DW DA RRD T+N + + G VYD+ G D
Sbjct: 89 GHPYEVTTLREDTETFGRKAKVAFGRDWVKDAERRDFTMNGLSVDATGVVYDHVGGIADA 148
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI-ALKPDNHEEETLXVLKNNVHGLGNISG 854
+ RRV F+GDPD R+ EDYLRI+R+FR + A +PD + L ++ GL ++S
Sbjct: 149 RARRVRFIGDPDQRIAEDYLRILRFFRIHAAFGAGEPD--RDGYLACIRGRA-GLASLSA 205
Query: 855 ERIWGELKK 881
ER+ E+ K
Sbjct: 206 ERVRMEMLK 214
>UniRef50_Q5NNN0 Cluster: TRNA nucleotidyltransferase; n=3;
Sphingomonadaceae|Rep: TRNA nucleotidyltransferase -
Zymomonas mobilis
Length = 406
Score = 148 bits (358), Expect = 2e-34
Identities = 78/188 (41%), Positives = 115/188 (61%), Gaps = 1/188 (0%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 500
IR GG+VRD L+GL D+D AT PE+ E+ + + I G +HGTITA + K
Sbjct: 29 IRFVGGSVRDTLLGLPVNDIDCATRHHPEKTMELIRSAGFKAIPT-GIQHGTITALLPTK 87
Query: 501 ENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD-GSVYDYFYGYEDL 677
E+T+LR D+ TDGR A + ++ +W+ DA RRD TIN+++ + G V+DYF G DL
Sbjct: 88 SPVEITSLRRDVSTDGRHATIAYSDNWEDDAQRRDFTINALYAEAESGLVHDYFGGLADL 147
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
+ V F+G+P+ R+ ED+LRI+R+FRF+ R +N + E L + + L +S E
Sbjct: 148 KAHSVRFIGNPETRIAEDHLRILRFFRFFARFG--QNNPDPEALAACIKHANDLMALSRE 205
Query: 858 RIWGELKK 881
RI E+ K
Sbjct: 206 RIASEVLK 213
>UniRef50_Q6G2K6 Cluster: Poly(A) polymerase; n=6; Rhizobiales|Rep:
Poly(A) polymerase - Bartonella henselae (Rochalimaea
henselae)
Length = 417
Score = 147 bits (357), Expect = 3e-34
Identities = 81/190 (42%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV-NGERHGTITARIN 494
E RI GGAVR+ L+ D+D ATT P+++ + EE + G GT+T ++
Sbjct: 31 EARIVGGAVRNQLLEQPISDVDIATTCLPQQI--IVRVEEAGFKAIPTGIAFGTVTV-VS 87
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYED 674
++EVTTLR D+ TDGR A V F +DW+ DA RRD T+N+++ G++YD G +D
Sbjct: 88 QSCSYEVTTLRSDIETDGRHAKVAFGRDWQKDAERRDFTMNALYCDAAGNLYDAVGGLDD 147
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI-ALKPDNHEEETLXVLKNNVHGLGNIS 851
+ R V F+G + R++EDYLRI+R+FRF+ A +PD + LK HGL +S
Sbjct: 148 IASRTVRFIGIAEKRIREDYLRILRFFRFFAWYGAGRPDVQGLKACVCLK---HGLQKLS 204
Query: 852 GERIWGELKK 881
ERIWGE+KK
Sbjct: 205 SERIWGEMKK 214
>UniRef50_A3UG83 Cluster: Probable poly(A) polymerase; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: Probable poly(A)
polymerase - Oceanicaulis alexandrii HTCC2633
Length = 408
Score = 147 bits (355), Expect = 5e-34
Identities = 84/188 (44%), Positives = 112/188 (59%), Gaps = 3/188 (1%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 503
RI GGAVR+ L G +D+D AT TP+E + A ++ I G HGTITA I K
Sbjct: 32 RIVGGAVRNALQGAPVEDVDIATQLTPQETLDALKAAGIKAIPT-GLDHGTITAVIKGKP 90
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQK 683
FE+TTLR D+ TDGR A V FT DW +DA+RRD +N+++ DGS++D + G D
Sbjct: 91 -FEITTLRKDVSTDGRRAVVAFTTDWAIDASRRDFRLNAIYARRDGSLFDPYDGVADALA 149
Query: 684 RRVAFVGDPDVRVKEDYLRIMRYFRF---YGRIALKPDNHEEETLXVLKNNVHGLGNISG 854
RV F+G+ D R+ ED LRI+R++RF YG AL P+ H GL ++
Sbjct: 150 HRVVFIGEADERLAEDVLRILRFYRFNAWYGS-ALDPEGH-----AACVRAAPGLKALAR 203
Query: 855 ERIWGELK 878
ER+W ELK
Sbjct: 204 ERVWKELK 211
>UniRef50_Q5P9P8 Cluster: Poly (A) polymerase; n=5;
Anaplasmataceae|Rep: Poly (A) polymerase - Anaplasma
marginale (strain St. Maries)
Length = 419
Score = 144 bits (350), Expect = 2e-33
Identities = 76/201 (37%), Positives = 112/201 (55%)
Frame = +3
Query: 279 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 458
V+ + + + + R+ GG VRD ++G D+D AT PE + + + ++ I
Sbjct: 11 VVRIVEAIEGARGNARLVGGCVRDSVLGRDTTDIDLATDLVPEMVIQALGSAGIKTIPT- 69
Query: 459 GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD 638
G +HGT+TA + +E+TTLR D+ DGR A V FT W DA+RRD T N+++
Sbjct: 70 GIKHGTVTAVVAGIP-YEITTLRRDLECDGRHAAVAFTNSWMEDASRRDFTFNALYCDKS 128
Query: 639 GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVL 818
G +YDYF G +DL+ R V F+GD + R+ ED+LRI+R FRF+ I K EE + +
Sbjct: 129 GKIYDYFSGMQDLENRTVVFIGDAEARINEDFLRILRVFRFHASICDK-SPLSEEIIFLC 187
Query: 819 KNNVHGLGNISGERIWGELKK 881
L +S ERI E K
Sbjct: 188 NKYADSLAKLSRERIRSEFFK 208
>UniRef50_Q1GCJ3 Cluster: Polynucleotide adenylyltransferase region;
n=23; Rhodobacterales|Rep: Polynucleotide
adenylyltransferase region - Silicibacter sp. (strain
TM1040)
Length = 386
Score = 144 bits (350), Expect = 2e-33
Identities = 82/216 (37%), Positives = 119/216 (55%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
+K+D P S T ++ D EI GG VR+ L+G DLD +T+ATP+ +
Sbjct: 1 MKIDEPWLHSPATRKLCDA---LTSAGAEIYFVGGCVRNALLGEPVSDLDLSTSATPQYV 57
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
E +++I G HGT+T + D + FE+TT R D+ TDGR A V F + DA
Sbjct: 58 TEAAEQAGLKVIPT-GIEHGTVTVVV-DGDPFEITTFRRDVATDGRRAVVAFATEILEDA 115
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRD T+N+++ G + D G+EDL+ RRV F+GD R++EDYLRI+RYFRF+
Sbjct: 116 RRRDFTMNALYARPTGEIVDPLSGFEDLRARRVRFIGDATRRIQEDYLRILRYFRFHSWY 175
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ E L + GL ++S ER+ E+ K
Sbjct: 176 GDAEAGFDPEALAAIAATQEGLDHLSRERVGAEIMK 211
>UniRef50_Q0BRM1 Cluster: Poly(A) polymerase; n=2;
Acetobacteraceae|Rep: Poly(A) polymerase - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 413
Score = 144 bits (349), Expect = 3e-33
Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 5/193 (2%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
+ R GG VRD L G D+D A PE+ + + I G HGT+TA ++
Sbjct: 27 QARPVGGCVRDALAGRPVADIDLAVPMPPEQTLQRLEQAGLHSIPT-GLSHGTVTA-VSR 84
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
++FE+T+LR D+ TDGR A+V FT DW+ DA RRD TIN+M L DG+++DYF G +DL
Sbjct: 85 GQHFEITSLRRDLATDGRHAEVSFTDDWQEDAARRDFTINAMSLSPDGTLHDYFGGLDDL 144
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRF---YGR--IALKPDNHEEETLXVLKNNVHGLG 842
+ RV FVG RV ED LR +R+FRF YGR +PD + + + L
Sbjct: 145 RAGRVRFVGQAGRRVAEDRLRALRFFRFQARYGRWEQGTEPDAAAMQAITAMAGE---LT 201
Query: 843 NISGERIWGELKK 881
+S ER+W EL++
Sbjct: 202 QLSAERVWSELRR 214
>UniRef50_Q5FU27 Cluster: Poly(A) polymerase/t-RNA
nucleotidyltransferase; n=1; Gluconobacter oxydans|Rep:
Poly(A) polymerase/t-RNA nucleotidyltransferase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 396
Score = 141 bits (342), Expect = 2e-32
Identities = 80/185 (43%), Positives = 108/185 (58%), Gaps = 1/185 (0%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 503
R+ GG+VRDLL G+ DLD AT P++++ +R+I G HGT+TA + D
Sbjct: 28 RLVGGSVRDLLAGVAVHDLDLATPEPPDDVQRRLEQAGIRVIPT-GLAHGTVTALL-DSV 85
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQK 683
+E+TTLR D TDGR A V +T+DW DA RRD TIN+M L ++DYF G ED+Q
Sbjct: 86 PYEITTLRRDEETDGRHAIVAWTQDWAEDAARRDFTINAMSLDRHDRLHDYFGGREDIQN 145
Query: 684 RRVAFVGDPDVRVKEDYLRIMRYFRFYGRIAL-KPDNHEEETLXVLKNNVHGLGNISGER 860
RV FVGD R+ ED LR +R+FRF R PD + + + +G +S ER
Sbjct: 146 HRVRFVGDASRRIAEDALRALRFFRFDARYGHGVPD---RKACQAVSEQLGLIGTLSAER 202
Query: 861 IWGEL 875
+ EL
Sbjct: 203 VASEL 207
>UniRef50_A0NYQ1 Cluster: Poly(A) polymerase; n=1; Stappia aggregata
IAM 12614|Rep: Poly(A) polymerase - Stappia aggregata
IAM 12614
Length = 414
Score = 141 bits (342), Expect = 2e-32
Identities = 77/188 (40%), Positives = 113/188 (60%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E R+ GGAVR+ L+G D+D ATTA+PE + + A ++ I G HGTIT ++
Sbjct: 33 EARVVGGAVRNTLLGHPVPDVDIATTASPEMVMKRARAAGLKPIGT-GIDHGTITV-VSS 90
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
+EVTTLR D+ T GR A V F ++W DA RRD T+N++++ G ++D G +D
Sbjct: 91 GYPYEVTTLREDVETFGRQARVVFGRNWTRDAERRDFTLNALYVDRHGRLHDPLGGLDDC 150
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
R V F+GDPD R++EDYLRI+R+FR Y A + + + L GL ++S E
Sbjct: 151 LNRHVRFIGDPDTRIREDYLRILRFFRIYA--AYGAGDMDADGLGACLRQRDGLRHLSAE 208
Query: 858 RIWGELKK 881
RI E+++
Sbjct: 209 RIGHEMRR 216
>UniRef50_Q2VZL3 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase; n=3; Magnetospirillum|Rep: TRNA
nucleotidyltransferase/poly(A) polymerase -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 435
Score = 141 bits (341), Expect = 2e-32
Identities = 74/185 (40%), Positives = 110/185 (59%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 500
+R GG VRD L+ KD+D AT PE + + + I G HGT+TA I K
Sbjct: 42 VRFVGGCVRDALLKRPIKDVDIATPDPPERVLALLDDAGIHAIPT-GIDHGTVTAVIG-K 99
Query: 501 ENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQ 680
++E+TTLR+D+ + GR A +++T DW+ DA+RRD T+N++ +G+VYD F G D+
Sbjct: 100 AHYEITTLRVDVESFGRHARIEYTDDWRADASRRDFTMNALSADPEGNVYDPFDGIADMA 159
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
RV FVG+P+ R++ED LR++R+FRF+ + E L + L +SGER
Sbjct: 160 AGRVRFVGEPEKRIEEDALRLLRFFRFHAHYG-RGIAMETRALNACRRMADRLKGLSGER 218
Query: 861 IWGEL 875
+ GEL
Sbjct: 219 VAGEL 223
>UniRef50_A5NWU9 Cluster: Polynucleotide adenylyltransferase region;
n=3; Alphaproteobacteria|Rep: Polynucleotide
adenylyltransferase region - Methylobacterium sp. 4-46
Length = 418
Score = 141 bits (341), Expect = 2e-32
Identities = 82/201 (40%), Positives = 114/201 (56%), Gaps = 3/201 (1%)
Frame = +3
Query: 288 LKKIFDKYK---HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 458
L+K+ D E R+ GGAVRD L+G D+D ATT PE + A ++ +
Sbjct: 18 LRKVLDALALPGEETRLVGGAVRDALLGRAVADVDLATTLLPETVMRRAAASGLKPVPT- 76
Query: 459 GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD 638
G HGT+T + E FEVTTLR D+ TDGR A V++ +D+ DA RRD TIN++F
Sbjct: 77 GISHGTVTV-VAHGEPFEVTTLREDVETDGRHAVVRYGRDFGRDAARRDFTINALFADAG 135
Query: 639 GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVL 818
G ++D G DL RV F+GDP R++EDYLRI+R+FRF+ R P + +
Sbjct: 136 GHLHDPVGGLPDLAAGRVRFIGDPAQRIREDYLRILRFFRFHARYGRGPLDPAGLAAAIA 195
Query: 819 KNNVHGLGNISGERIWGELKK 881
+ GL +S ER+ E+ K
Sbjct: 196 ARD--GLATLSRERVRVEMLK 214
>UniRef50_Q2RXH4 Cluster: Polynucleotide adenylyltransferase region;
n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Polynucleotide adenylyltransferase region -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 525
Score = 140 bits (339), Expect = 4e-32
Identities = 81/191 (42%), Positives = 105/191 (54%), Gaps = 3/191 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMG---LTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITAR 488
E R GG VRD L+ L P D+D ATT PE + + A ++ + G HGT+T
Sbjct: 95 EARFVGGCVRDSLLRRDPLRPMDIDIATTERPERVIALIEAAGLKAVPT-GLAHGTLTVV 153
Query: 489 INDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGY 668
K FEVTTLR D DGR A+V FT ++ DA RRD TIN++ +G V+DYF G
Sbjct: 154 AGGKP-FEVTTLRRDTACDGRHAEVAFTTSFREDAGRRDFTINALSADREGRVFDYFDGI 212
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNI 848
DL V F+G P R+ EDYLRI+R+FRF+ R P + + L GL +
Sbjct: 213 SDLHAGWVRFIGRPMDRIAEDYLRILRFFRFHARFGRPP--ADPDALSACAAQAAGLDRL 270
Query: 849 SGERIWGELKK 881
S ER+ EL K
Sbjct: 271 SAERVRSELLK 281
>UniRef50_Q0FDP1 Cluster: Poly A polymerase family protein; n=1;
alpha proteobacterium HTCC2255|Rep: Poly A polymerase
family protein - alpha proteobacterium HTCC2255
Length = 383
Score = 139 bits (337), Expect = 8e-32
Identities = 80/216 (37%), Positives = 125/216 (57%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
+K+++ KS T +V+D K + +++ GG VR+ L+GL D+D +T A P+E+
Sbjct: 1 MKINNRWLKSKDTIKVMDALKCRN---NQVLFVGGCVRNSLLGLPITDIDISTNARPDEI 57
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
+ ++ I G HGTIT N+K FEVT+ R D+ TDGR A V ++ + DA
Sbjct: 58 INLAKKAGLKSIPT-GINHGTITIISNNKA-FEVTSFRKDIKTDGRHATVAYSDKIEDDA 115
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRD TIN++++ DG + D G +DL+KR V F+ DP+ R+ EDYLRI+R+FRF
Sbjct: 116 ERRDFTINAIYMTTDGIIIDPLNGMKDLKKRHVRFIKDPNKRIIEDYLRILRFFRFTAEY 175
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ E L N+ G+ ++ ER+ E++K
Sbjct: 176 GDPDLGIDAEGLSACAANIDGIALLAKERVGSEIRK 211
>UniRef50_A5CCR6 Cluster: PolyA polymerase; n=1; Orientia
tsutsugamushi Boryong|Rep: PolyA polymerase - Orientia
tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 402
Score = 139 bits (337), Expect = 8e-32
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 503
RI GG++R++++G D+D AT PE++ ++ ++ G + GT+TA I +E
Sbjct: 30 RIIGGSIRNIILGQPVNDIDIATPLLPEQVMDLLKLNNIKCY-ATGIKFGTVTAVIK-RE 87
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV-YDYFYGYEDLQ 680
FE+TTLR D+ GR A V+F+ D+ DA RRD TIN++ F+ S+ YDYF G +DL+
Sbjct: 88 KFEITTLRQDVQCYGRHAKVEFSNDYFEDARRRDFTINALSYSFEQSLLYDYFNGLQDLK 147
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
RRV F+GD D R++ED LRI+R+FRF A D +E + L +S ER
Sbjct: 148 DRRVIFIGDSDTRIQEDVLRILRFFRFSSYYARSID---QEGYQSCAKHAKSLTILSKER 204
Query: 861 IWGELKK 881
+ EL K
Sbjct: 205 VIQELSK 211
>UniRef50_Q1GRA3 Cluster: Polynucleotide adenylyltransferase region;
n=5; Sphingomonadales|Rep: Polynucleotide
adenylyltransferase region - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 398
Score = 139 bits (336), Expect = 1e-31
Identities = 81/191 (42%), Positives = 114/191 (59%), Gaps = 4/191 (2%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 500
+++ GGAVRD L+GL D+D AT P E+ A +++I G HGT+TA I
Sbjct: 29 VKVVGGAVRDTLLGLDVTDVDLATPLVPGEVTRRLEAAGIKVIPT-GIAHGTVTA-IASG 86
Query: 501 ENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLG-FDGSVYDYFYGYEDL 677
++ E+TTLR D+ TDGR A V F DW+ DA RRD TIN+++ G++ D+F G DL
Sbjct: 87 DHHEITTLRRDVATDGRRATVAFADDWREDAARRDFTINALYADPRTGAIDDWFGGLADL 146
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRF---YGRIALKPDNHEEETLXVLKNNVHGLGNI 848
+ RVAF+GD R+ ED+LRI+R++RF +GR L P +H + L ++
Sbjct: 147 DRGRVAFIGDAASRIAEDHLRILRFYRFAARFGRGDLDPASH-----AAVVAARQSLKSL 201
Query: 849 SGERIWGELKK 881
S ERI EL K
Sbjct: 202 SRERIADELAK 212
>UniRef50_A4EGY8 Cluster: PolyA polymerase family protein; n=2;
Rhodobacteraceae|Rep: PolyA polymerase family protein -
Roseobacter sp. CCS2
Length = 378
Score = 138 bits (335), Expect = 1e-31
Identities = 74/183 (40%), Positives = 109/183 (59%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 512
GG VR+ L+ DLD +T A PE + ++ A +++ I G HGT+T ++D FE
Sbjct: 32 GGCVRNELLDEPVADLDLSTDALPEFVMKLAKAAKIKAIPT-GIDHGTVTLIVDDVP-FE 89
Query: 513 VTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRV 692
+TT R D+ TDGR A V ++ + DA RRD T+N+++ DG + D G DL+ RR+
Sbjct: 90 ITTFRRDVATDGRRATVAYSDNMTDDARRRDFTMNALYADADGQIADPLGGLPDLKARRI 149
Query: 693 AFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGE 872
F+ D D R+KEDYLRI+R+FRFY D + + L +N+ GL ++S ERI E
Sbjct: 150 RFIEDADRRIKEDYLRILRFFRFYAWYGDVNDGPDVDGLAACADNIEGLQSLSVERITAE 209
Query: 873 LKK 881
+ K
Sbjct: 210 MLK 212
>UniRef50_Q9AB26 Cluster: Poly A polymerase family protein; n=3;
Alphaproteobacteria|Rep: Poly A polymerase family
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 413
Score = 137 bits (331), Expect = 4e-31
Identities = 85/190 (44%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 503
R GG VR+ LMG D+D ATT TP+ + + +R I G HGTITA ++
Sbjct: 30 RFVGGCVRNTLMGKPVDDIDIATTLTPDLVIDALEQAGLRAIPT-GVDHGTITA-VSGGR 87
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYD-YFYGYEDLQ 680
+E+TTLR D+ TDGR A V FT+DW DA RRD N+++ DG VYD G D
Sbjct: 88 PYEITTLRKDVSTDGRRAVVAFTQDWNQDAERRDFRFNALYADTDGRVYDPTGEGIRDAH 147
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRF---YGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
+ RV FVGDP R++EDYLRI+R+FRF YGR +PD LK V G +
Sbjct: 148 EGRVVFVGDPMTRIREDYLRILRFFRFQAWYGR--GEPDQKGLAACKALKGMVSGR---A 202
Query: 852 GERIWGELKK 881
ER EL K
Sbjct: 203 AERTQKELMK 212
>UniRef50_Q92JQ2 Cluster: Poly(A) polymerase [EC:2.7.7.19]; n=14;
Rickettsia|Rep: Poly(A) polymerase [EC:2.7.7.19] -
Rickettsia conorii
Length = 436
Score = 136 bits (328), Expect = 9e-31
Identities = 74/170 (43%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Frame = +3
Query: 375 DLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRF 554
D+D AT TP E+ + + +++ I G + GTITA +N+ E FE+TTLR D+ +GR
Sbjct: 95 DIDIATNLTPSEVTNILSGAKIKTIPT-GLKFGTITATLNN-EKFEITTLRKDIECNGRH 152
Query: 555 ADVQFTKDWKLDANRRDLTINSM-FLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKED 731
A V FT D+ DA RRD TIN++ + F +YDYF G++DLQ+ +V F+G+ R+KED
Sbjct: 153 AKVIFTNDFAEDAARRDFTINALSYCPFKNEIYDYFEGFKDLQQEKVVFIGEALDRIKED 212
Query: 732 YLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
YLRI+R+FRF A + D+ + LK+ GL +S ERI E+ K
Sbjct: 213 YLRILRFFRFSSYYANQLDDGNFKACKALKD---GLKTLSRERIKSEMDK 259
>UniRef50_Q0C5B7 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase family protein; n=1; Hyphomonas neptunium
ATCC 15444|Rep: TRNA nucleotidyltransferase/poly(A)
polymerase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 381
Score = 132 bits (319), Expect = 1e-29
Identities = 77/187 (41%), Positives = 105/187 (56%), Gaps = 1/187 (0%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 503
R GG+VR+ L GL +D+D AT P+E A +R+I G HGT+TA
Sbjct: 13 RYVGGSVRNTLRGLKAEDVDIATQLLPQETAAALEAAGIRVIPT-GIEHGTVTAFYKGVP 71
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYG-YEDLQ 680
E+TTLR D+ TDGR A V FT+DW DA RRD +N+++ G +G +Y+ G +D
Sbjct: 72 -IEITTLRRDVETDGRRAVVAFTQDWAEDAARRDFRMNAIYAGAEGELYEVIPGSIDDAI 130
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
RV F+G+ D R+ EDYLRI+R++RF D E+ GL I+ ER
Sbjct: 131 AGRVIFIGEGDQRLIEDYLRILRFYRFNAWYGAGID---EDGQGACARQREGLRKIAAER 187
Query: 861 IWGELKK 881
IW ELK+
Sbjct: 188 IWKELKR 194
>UniRef50_A0NJB1 Cluster: Polynucleotide adenylyltransferase; n=2;
Oenococcus oeni|Rep: Polynucleotide adenylyltransferase
- Oenococcus oeni ATCC BAA-1163
Length = 399
Score = 129 bits (312), Expect = 8e-29
Identities = 79/205 (38%), Positives = 113/205 (55%), Gaps = 2/205 (0%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
+E I + + + ++ GG+VRD ++ D+D T A P EMK +F + N
Sbjct: 10 KEAIPVLNCLENHGYQAYFVGGSVRDAILRRPIHDVDITTDALPNEMKRIFKTAD----N 65
Query: 453 VNGERHGTITARINDKENFEVTTLRID-MVTDGRFA-DVQFTKDWKLDANRRDLTINSMF 626
GE+HGT +N K+ +EVTT RID D R +V FTK+ K D +RRD TIN+
Sbjct: 66 YAGEKHGTDLVFLNGKK-YEVTTFRIDGKYLDNRHPKNVSFTKNLKEDLSRRDFTINAFA 124
Query: 627 LGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
+ +G ++DYF G DL+K+ + VGD R ED LRI+R FRF ++ K EEET
Sbjct: 125 MNQEGELFDYFSGLNDLKKKIIRTVGDAKQRFSEDALRILRAFRFSSQLDFK---IEEET 181
Query: 807 LXVLKNNVHGLGNISGERIWGELKK 881
L + L +I+ ERI+ E K
Sbjct: 182 LRASQMIKENLNDIATERIFVEFSK 206
>UniRef50_A7DHD6 Cluster: Polynucleotide adenylyltransferase region;
n=2; Methylobacterium extorquens PA1|Rep: Polynucleotide
adenylyltransferase region - Methylobacterium extorquens
PA1
Length = 424
Score = 126 bits (305), Expect = 6e-28
Identities = 73/188 (38%), Positives = 102/188 (54%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E R+ GG VRD L+G D+D ATT PE + ++ + G HGT+T +
Sbjct: 41 ETRLVGGCVRDALLGTIVADIDLATTLRPEAVMACARKAGIKAVGT-GIEHGTVTLVVGG 99
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
E EVTTLR D+ TDGR A V+F +D+ DA RRD TIN++ L G ++D G DL
Sbjct: 100 -EPHEVTTLREDVETDGRHAVVRFGRDFVRDAERRDFTINALSLDAGGRLHDTTGGVADL 158
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
RV F+GD R++ED LR++R+FRF+ R + E + + L +S E
Sbjct: 159 AAGRVRFIGDAATRLREDALRLLRFFRFHARYGSGAPDAEGLAASIAARD--SLDRLSRE 216
Query: 858 RIWGELKK 881
R+ E K
Sbjct: 217 RVRAEFLK 224
>UniRef50_Q1EZ98 Cluster: HDIG; n=1; Clostridium oremlandii
OhILAs|Rep: HDIG - Clostridium oremlandii OhILAs
Length = 450
Score = 124 bits (300), Expect = 2e-27
Identities = 81/205 (39%), Positives = 111/205 (54%), Gaps = 2/205 (0%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
E+++D IF +E I GG VRD ++ +P+D D T TPE+M E+ + +V
Sbjct: 16 EQILD---IFSINGYEGYIVGGCVRDSILNKSPQDWDICTNCTPEKMMELLSGFKVIP-- 70
Query: 453 VNGERHGTITARINDKENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMF 626
G +HGT+T I D +EVTT R+D DGR + VQFT + D RRD TIN+M
Sbjct: 71 -TGLKHGTVTVVI-DHVGYEVTTYRVDGDYRDGRHPEKVQFTASLREDLKRRDFTINAMA 128
Query: 627 LGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
+ DY G EDL R++ VG+P R EDYLR++R RF ++ EE T
Sbjct: 129 YHHKDGLIDYHGGMEDLWNRKIKTVGNPLERFSEDYLRMLRAVRFSAQLDY---TLEERT 185
Query: 807 LXVLKNNVHGLGNISGERIWGELKK 881
++ H +G IS ERI EL K
Sbjct: 186 FQGIRALSHNIGKISTERIREELNK 210
>UniRef50_Q3XW94 Cluster: Polynucleotide adenylyltransferase; n=1;
Enterococcus faecium DO|Rep: Polynucleotide
adenylyltransferase - Enterococcus faecium DO
Length = 249
Score = 122 bits (293), Expect = 2e-26
Identities = 77/199 (38%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
++ I + K + +E GG+VRD+L+ D+D AT+A PEE+K++F + I+
Sbjct: 11 QKAIPVLKKLENAGYEAYFVGGSVRDILLNQPIHDVDIATSAFPEEIKQLFP----KTID 66
Query: 453 VNGERHGTITARINDKENFEVTTLRIDMV-TDGRFAD-VQFTKDWKLDANRRDLTINSMF 626
+ G HGT+ ND E +E+TT R + D R D V+F + D RRD TIN+
Sbjct: 67 I-GIEHGTVLVLEND-EQYEITTFRTESTYQDYRRPDHVEFVRSLSEDLKRRDFTINAFA 124
Query: 627 LGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
L DG + D F G +DL+++ + VG+P R ED LR+MR RF ++ K EEET
Sbjct: 125 LKEDGEIIDLFDGLQDLEEQILRAVGNPHERFHEDALRMMRGLRFVSQLGFK---LEEET 181
Query: 807 LXVLKNNVHGLGNISGERI 863
+K N LG IS ERI
Sbjct: 182 FYAIKENHELLGKISVERI 200
>UniRef50_Q5FKF0 Cluster: CCA-adding enzyme; n=5; Lactobacillus|Rep:
CCA-adding enzyme - Lactobacillus acidophilus
Length = 399
Score = 122 bits (293), Expect = 2e-26
Identities = 83/219 (37%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Frame = +3
Query: 231 VIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEE 410
+IK+D+ +IFT+ + L+++ D E GG+VRD+L+ D+D T+A PEE
Sbjct: 1 MIKIDN--LPNIFTKAMPVLQRLEDA-GFEAYFVGGSVRDVLLDRHVHDIDITTSAYPEE 57
Query: 411 MKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDM-VTDGRFAD-VQFTKDWK 584
+KE+F + I+ G +HGT+T + + E++E+TT R + D R D V F ++
Sbjct: 58 VKELFE----KSIDT-GIKHGTVTV-LYEGESYEITTFRTESGYQDFRRPDHVTFVQNLD 111
Query: 585 LDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFY 764
D RRD TIN++ + G + D F G EDL+KR + VG+P+ R ED LR+MR RF
Sbjct: 112 EDLKRRDFTINALAMDIRGQIIDLFNGVEDLKKRVIRAVGNPETRFHEDALRMMRAVRFM 171
Query: 765 GRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
++ K EE+T +K+N L IS ERI E K
Sbjct: 172 SQLEFK---LEEKTERAIKDNHELLKKISIERIREEFVK 207
>UniRef50_A6NVT9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 392
Score = 121 bits (291), Expect = 3e-26
Identities = 80/185 (43%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 512
GG VRDLL+G TP D D T+A PEE+ +F R + G RHGT+T D E
Sbjct: 31 GGCVRDLLLGRTPGDWDVTTSAMPEEVIALFD----RTVPT-GIRHGTVTVLTEDG-GVE 84
Query: 513 VTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKR 686
VTT R + DGR D V F D D RRD TIN+M LG DG+V D F G +DLQ R
Sbjct: 85 VTTFRAESGYADGRHPDAVTFGGDLTGDLTRRDFTINAMALGPDGAVIDPFGGQKDLQAR 144
Query: 687 RVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIW 866
+ VG+P R +ED LR++R RF ++ +N T L++N +S ERI
Sbjct: 145 LIRCVGEPGRRFREDALRMLRAVRFSAQLGFAVEN---ATAEALRDNAELTACLSAERIR 201
Query: 867 GELKK 881
EL+K
Sbjct: 202 TELEK 206
>UniRef50_Q1FP87 Cluster: TRNA adenylyltransferase; n=4;
Clostridiales|Rep: TRNA adenylyltransferase -
Clostridium phytofermentans ISDg
Length = 459
Score = 119 bits (287), Expect = 9e-26
Identities = 77/185 (41%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 512
GG VRD L+G P D D T+A P E+K++F+ R I+ G +HGT+T + KE FE
Sbjct: 27 GGCVRDSLLGRIPGDWDITTSANPCEVKQIFS----RTIDT-GIKHGTVTVMLG-KEGFE 80
Query: 513 VTTLRID-MVTDGRFA-DVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKR 686
VTT R+D D R V++TK+ D RRD TIN+M + D F G +DLQ +
Sbjct: 81 VTTYRLDGEYEDNRHPKQVEYTKNLIEDLKRRDFTINAMAYNAKDGLVDEFEGLKDLQDK 140
Query: 687 RVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIW 866
++ VG D R ED LRI+R RF ++ E+ETL ++ L NIS ERI
Sbjct: 141 KIRCVGSADQRFDEDALRILRAVRFSAQLNF---TIEDETLAAIRLKALNLKNISAERIR 197
Query: 867 GELKK 881
EL K
Sbjct: 198 EELNK 202
>UniRef50_Q660G6 Cluster: Polynucleotide adenylyltransferase; n=3;
Borrelia burgdorferi group|Rep: Polynucleotide
adenylyltransferase - Borrelia garinii
Length = 410
Score = 117 bits (281), Expect = 5e-25
Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 3/206 (1%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
+++I + KIF K +E + GGA+RDLL+ P D DFAT ATPEE+ +F ++
Sbjct: 8 KDIIKIGKIFKKNNYEFYLVGGALRDLLLNKQPCDFDFATNATPEEIITLF-PNNIK--- 63
Query: 453 VNGERHGTITARINDKENFEVTTLRIDMVTDGRFA--DVQFTKDWKLDANRRDLTINSMF 626
G +HGTI N K+ FE+TT RI+ + V++TK+ D RRD TIN++
Sbjct: 64 -TGIKHGTIGIIFN-KKIFEITTYRIEKEYENNRTPKQVEYTKNLIKDLERRDFTINAIA 121
Query: 627 LG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEE 803
+ F+ ++ D + G +DL K+ + +G+ + R+ ED LRI+R RF + K E+
Sbjct: 122 MDIFNFNIIDCYNGKKDLNKKIIRCIGNSNKRLAEDALRILRAARFSSTLNFK---IEKN 178
Query: 804 TLXVLKNNVHGLGNISGERIWGELKK 881
TL +K + IS ERI E K
Sbjct: 179 TLISMKYKKENILMISKERIKNEFHK 204
>UniRef50_Q895R6 Cluster: Poly(A) polymerase; n=9; Clostridium|Rep:
Poly(A) polymerase - Clostridium tetani
Length = 451
Score = 116 bits (279), Expect = 8e-25
Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 2/205 (0%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
+EV + I +++ +E GG +RD L+ P D D T A E++ ++F + + ++
Sbjct: 12 KEVKYIIDILEEHGYEAYAVGGCIRDSLLNRIPHDWDITTDAKGEQVIKIFKSLDFNVVK 71
Query: 453 VNGERHGTITARINDKENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSMF 626
G R+GT+T IN +E+TT RID DGR + V+FT + K D +RRD T+N+M
Sbjct: 72 T-GIRYGTVTLIINSI-GYEITTYRIDGNYLDGRHPEKVEFTNNLKEDLSRRDFTVNAMA 129
Query: 627 LGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
+ DY+ G EDL+ + + VGDP R ED LR++R RF ++ + + +E
Sbjct: 130 YNHKKGLADYYNGREDLKNKIIKSVGDPLKRFSEDALRMIRGVRFSAQLDFNIEENTKEA 189
Query: 807 LXVLKNNVHGLGNISGERIWGELKK 881
+ L +N+ N+S ERI E K
Sbjct: 190 IKKLSSNIK---NVSVERIREEFNK 211
>UniRef50_Q1VLB3 Cluster: PolyA polymerase family protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: PolyA polymerase
family protein - Psychroflexus torquis ATCC 700755
Length = 248
Score = 116 bits (279), Expect = 8e-25
Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Frame = +3
Query: 318 EIRIAGGAVRDLLM----GLT---PKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGT 476
E R GG VR+ L+ G++ +DLD A + + + +R+++ G HGT
Sbjct: 30 EARFVGGVVRNGLLARDKGISFDAEQDLDIAVSLPITCFADAARQQGLRVLDT-GLAHGT 88
Query: 477 ITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDY 656
+T + ++ EVT LR D+ TDGR A VQ T DW +DA RRD TIN+++L G+V+D
Sbjct: 89 VTV-LAGSQSAEVTQLRSDISTDGRHAKVQPTTDWHIDAQRRDFTINALYLDAHGAVHDM 147
Query: 657 FYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNH-EEETLXVLKNNVH 833
G DL+ + FVGD R++ED+LR++R RF IA PD + L+ ++H
Sbjct: 148 VGGLSDLKAGCLRFVGDAACRLQEDHLRLLRALRF---IACYPDLYMPAPDQKALEAHIH 204
Query: 834 GLGNISGERIWGELKK 881
L ++S ERI EL+K
Sbjct: 205 LLSSLSAERIASELRK 220
>UniRef50_A4XLP3 Cluster: TRNA adenylyltransferase; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep: TRNA
adenylyltransferase - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 394
Score = 116 bits (279), Expect = 8e-25
Identities = 76/204 (37%), Positives = 113/204 (55%), Gaps = 1/204 (0%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
+E + + K +++ + + GG +RD L+G TP+D D AT A PE++ ++F + I
Sbjct: 6 DEPLQVIKRLNQHNFKAYLVGGCLRDYLLGTTPQDFDIATDAKPEDVMKLFE----KTIP 61
Query: 453 VNGERHGTITARINDKENFEVTTLRIDM-VTDGRFADVQFTKDWKLDANRRDLTINSMFL 629
G +HGT+T IN+ + EVTT RI+ + R+ V+FT D RRD TIN++
Sbjct: 62 T-GIKHGTVTVIINNVK-IEVTTFRIEKEYQNHRWPTVEFTDSLYEDLKRRDFTINALAY 119
Query: 630 GFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL 809
D + DYF G +DL+ + V VG+P R ED LRI+R RF ++ D E +
Sbjct: 120 HPDEGLIDYFNGLDDLKNKIVRCVGNPHERFFEDALRILRCIRFATQLNFSIDEKTFEGV 179
Query: 810 XVLKNNVHGLGNISGERIWGELKK 881
+LK+ L IS ERI EL K
Sbjct: 180 VLLKDL---LKKISKERINAELSK 200
>UniRef50_A0UUV7 Cluster: Metal dependent phosphohydrolase; n=1;
Clostridium cellulolyticum H10|Rep: Metal dependent
phosphohydrolase - Clostridium cellulolyticum H10
Length = 448
Score = 114 bits (274), Expect = 3e-24
Identities = 77/200 (38%), Positives = 111/200 (55%), Gaps = 2/200 (1%)
Frame = +3
Query: 288 LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGER 467
+KK+ ++ ++ + GG VRD ++ P D D T A P ++K +F R + G +
Sbjct: 17 IKKL-NEAGYDAYLVGGCVRDSILCKAPYDWDITTNALPIDIKSIFD----RTYDT-GIK 70
Query: 468 HGTITARINDKENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDG 641
HGT+T I + EVTT RID D R D V+FT + D RRD TIN+M +
Sbjct: 71 HGTVTVLIGEM-CLEVTTYRIDGDYKDFRRPDKVEFTSSLREDLARRDFTINAMAYHPEQ 129
Query: 642 SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK 821
+ D+F G +DL+KR + VGDP+ R +ED LR+MR RF ++ + EE T +K
Sbjct: 130 GLVDFFGGLQDLKKRIIKAVGDPEQRFREDALRMMRAIRFSAQLGFE---IEEATFEAIK 186
Query: 822 NNVHGLGNISGERIWGELKK 881
+N + NIS ERI EL K
Sbjct: 187 SNSALIANISSERIRDELNK 206
>UniRef50_A5Z8C9 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Eubacterium ventriosum ATCC 27560
Length = 457
Score = 113 bits (272), Expect = 6e-24
Identities = 77/212 (36%), Positives = 110/212 (51%), Gaps = 2/212 (0%)
Frame = +3
Query: 252 EFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTA 431
EFK V + + + +E GG VRD ++ P+D D T+A PE++KE+F
Sbjct: 9 EFKINIPGSVKLIIDVLENNGYEAFAVGGCVRDTILDREPQDWDITTSALPEQVKELFN- 67
Query: 432 EEVRMINVNGERHGTITARINDKENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRD 605
R ++ G +HGT+T I +EVTT RID D R + V+FT + D RRD
Sbjct: 68 ---RTLDT-GIQHGTVTVMIKHV-GYEVTTYRIDGEYNDSRHPESVEFTSNLIEDLKRRD 122
Query: 606 LTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKP 785
TIN+M + D F G D+ + + VG+P+ R ED LRI+R RF ++
Sbjct: 123 FTINAMAYNEREGLVDAFDGINDINNKIIRCVGEPEERFGEDALRILRAVRFSAQLGFDI 182
Query: 786 DNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
D E+T+ +K L NIS ERI EL+K
Sbjct: 183 D---EKTMEAIKKLAPTLENISAERIKTELEK 211
>UniRef50_P42977 Cluster: CCA-adding enzyme; n=3; Bacillus|Rep:
CCA-adding enzyme - Bacillus subtilis
Length = 397
Score = 113 bits (271), Expect = 8e-24
Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 2/204 (0%)
Frame = +3
Query: 276 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 455
+ + + +I + H+ GGAVRD M T D+D AT A P++++ +F R ++V
Sbjct: 7 KALPVLRILIEAGHQAYFVGGAVRDSYMKRTIGDVDIATDAAPDQVERLFQ----RTVDV 62
Query: 456 NGERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLTINSMFL 629
G+ HGTI D E +EVTT R D V R ++VQF + D RRDLTIN+M +
Sbjct: 63 -GKEHGTIIVLWED-ETYEVTTFRTESDYVDFRRPSEVQFISSLEEDLKRRDLTINAMAM 120
Query: 630 GFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL 809
DG V DYF G +D+ ++ + VG P+ R +ED LR++R RF ++ EE +
Sbjct: 121 TADGKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEEAI 180
Query: 810 XVLKNNVHGLGNISGERIWGELKK 881
K+ L ++S ER E +K
Sbjct: 181 AKEKSL---LSHVSVERKTIEFEK 201
>UniRef50_Q1VJ65 Cluster: Polynucleotide adenylyl transferase; n=1;
Psychroflexus torquis ATCC 700755|Rep: Polynucleotide
adenylyl transferase - Psychroflexus torquis ATCC 700755
Length = 258
Score = 111 bits (268), Expect = 2e-23
Identities = 62/184 (33%), Positives = 100/184 (54%)
Frame = +3
Query: 210 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 389
K +N +V + F+ I +++ + + + K + I GGA+RD L+ D+DF
Sbjct: 8 KLMQNTLVKSISL--FEQIKNDDIFKIFDLAENNKFNLWIVGGALRDFLIDKNINDIDFV 65
Query: 390 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 569
P E+ E+ + I+ G I ++N+KE + +T+LR D DGR+ V++
Sbjct: 66 YDINPAELVEILKTNNLNFISTY-INFGVIIIKLNNKE-YTLTSLREDFKQDGRYTKVRY 123
Query: 570 TKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMR 749
K K D+ RRDLTINS+++ + VYD+ G E L+ +V F+ D + ED LRIMR
Sbjct: 124 IKSIKKDSLRRDLTINSLYMDNNQKVYDFHNGLEHLENSKVIFIDDFKKKCLEDNLRIMR 183
Query: 750 YFRF 761
+ RF
Sbjct: 184 FIRF 187
>UniRef50_Q0TV45 Cluster: PolyA polymerase family protein; n=3;
Clostridium perfringens|Rep: PolyA polymerase family
protein - Clostridium perfringens (strain ATCC 13124 /
NCTC 8237 / Type A)
Length = 424
Score = 111 bits (267), Expect = 2e-23
Identities = 77/200 (38%), Positives = 110/200 (55%), Gaps = 6/200 (3%)
Frame = +3
Query: 300 FDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTI 479
F+ E I GG VRD L+ P+D D T A PE+++E+F + I G +HGT+
Sbjct: 16 FNSNGFEAFIVGGCVRDSLLNKKPQDYDITTNAFPEKIEELFD----KTIPT-GIKHGTV 70
Query: 480 TARINDKENFEVTTLRID--MVTDGRFADVQFTKDWKLDANRRDLTINSM----FLGFDG 641
T I DK +EVTT R+D + + + DV+F + + D +RRD TIN+M +LGF
Sbjct: 71 TVLI-DKNPYEVTTYRVDGEYLNNRKPKDVKFVSNIEEDLSRRDFTINAMAYSPYLGFK- 128
Query: 642 SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK 821
D F G +DL+ + + VGDPD R ED LR++R RF ++ K E+ T ++
Sbjct: 129 ---DCFNGKDDLKNKLIRCVGDPDKRFSEDALRMLRAIRFSCQLNFK---IEKLTAESIR 182
Query: 822 NNVHGLGNISGERIWGELKK 881
N + NIS ERI E K
Sbjct: 183 KNFKLIKNISMERIQSEFTK 202
>UniRef50_A6CRX0 Cluster: tRNA nucleotidyltransferase; n=1; Bacillus
sp. SG-1|Rep: tRNA nucleotidyltransferase - Bacillus sp.
SG-1
Length = 395
Score = 111 bits (266), Expect = 3e-23
Identities = 73/209 (34%), Positives = 117/209 (55%), Gaps = 2/209 (0%)
Frame = +3
Query: 261 SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 440
++F + + L+K+ ++ ++ GGAVRDLL+ D+D AT+A P+E+K +F
Sbjct: 6 TLFKQALPVLEKL-EEAGYQAYFVGGAVRDLLLNRPTNDIDIATSALPQEVKGVFP---- 60
Query: 441 RMINVNGERHGTITARINDKENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTI 614
+ I+V G HGT+ N+ +E+TT R + D R + V F K K D RRD TI
Sbjct: 61 KTIDV-GIEHGTVVVIYNETP-YEITTFRSEEEYKDHRRPESVTFIKSLKEDLQRRDFTI 118
Query: 615 NSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNH 794
N++ + G+++D F G D++ + + VG D R KED LR+MR RF ++ K +N
Sbjct: 119 NAIAMDRSGTIHDPFGGEVDIKAKTIRTVGSADERFKEDALRMMRAVRFMAQLGFKMEN- 177
Query: 795 EEETLXVLKNNVHGLGNISGERIWGELKK 881
+T +K N + L I+ ER+ E +K
Sbjct: 178 --DTFESIKRNGNTLKYIAVERLSAEFEK 204
>UniRef50_Q99U32 Cluster: CCA-adding enzyme; n=16;
Staphylococcus|Rep: CCA-adding enzyme - Staphylococcus
aureus (strain Mu50 / ATCC 700699)
Length = 400
Score = 110 bits (265), Expect = 4e-23
Identities = 76/210 (36%), Positives = 114/210 (54%), Gaps = 2/210 (0%)
Frame = +3
Query: 258 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 437
KS+F + L++I D E GG+VRD +MG D+D T+ATP+E++ +F+
Sbjct: 3 KSLFEQARPILEQIQDN-GFEAYYVGGSVRDYVMGRNIHDIDITTSATPDEIESIFS--- 58
Query: 438 VRMINVNGERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLT 611
I V G+ HGTI ND EN+EVTT R D V R + V F +D D RRD T
Sbjct: 59 -HTIPV-GKEHGTINVVFND-ENYEVTTFRAEEDYVDHRRPSGVTFVRDLYEDLQRRDFT 115
Query: 612 INSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDN 791
+N++ + +YDYF G +D+ R + VG + R +ED LR++R RF +++ +
Sbjct: 116 MNAIAMDTAYKLYDYFDGQQDINNRIIRTVGIAEERFQEDALRMIRCLRFQSQLSF---D 172
Query: 792 HEEETLXVLKNNVHGLGNISGERIWGELKK 881
ET ++ + + +S ERI EL K
Sbjct: 173 IAMETFEAMRTQMADIKFLSIERIVIELTK 202
>UniRef50_A4A0Y5 Cluster: Poly A polymerase; n=1; Blastopirellula
marina DSM 3645|Rep: Poly A polymerase - Blastopirellula
marina DSM 3645
Length = 426
Score = 109 bits (263), Expect = 7e-23
Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 4/204 (1%)
Frame = +3
Query: 282 IDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG 461
+++ + + H+ AGG VRD+L+G P+D D AT A PE ++++F + I G
Sbjct: 14 LEVVRTLKTHGHQALWAGGCVRDMLLGRDPQDFDVATDAPPERVRQIFGEKRTLAI---G 70
Query: 462 ERHGTITARINDKE-NFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMFLG 632
G IT + K EV T R D+ +DGR D V+FT + DA RRD TIN +F
Sbjct: 71 ASFGVITVQGGKKRGQIEVATFRQDVGYSDGRRPDEVRFTSA-EEDAKRRDFTINGIFYD 129
Query: 633 FDGS-VYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL 809
D S +YD+ G DL+ R V +GDP+ R ED LR++R RF + E T+
Sbjct: 130 PDASAIYDFVGGQIDLRDRLVRAIGDPNQRFAEDKLRMLRAIRFSSTFQF---DLEMNTM 186
Query: 810 XVLKNNVHGLGNISGERIWGELKK 881
++ + + +S ER+ E++K
Sbjct: 187 RAIQRHSRNIAVVSAERVAVEMRK 210
>UniRef50_O25357 Cluster: Poly(A) polymerase; n=4; Helicobacter|Rep:
Poly(A) polymerase - Helicobacter pylori (Campylobacter
pylori)
Length = 402
Score = 109 bits (261), Expect = 1e-22
Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
E + +L I++K HE+ + GG VRD LMG+TPKD D + A E KE+ R++
Sbjct: 6 EGLKELFDIYEKSSHELYLVGGCVRDYLMGITPKDYDLTSNALVNESKELLLKRHFRVLE 65
Query: 453 VNGERHGTITARINDKENFEVTTLRIDM--VTDGRFADVQFTKDWKLDANRRDLTINSMF 626
G +HGTITA + + +++E+TT RI+ + + ++ F+ D RRD ++N++
Sbjct: 66 -TGIKHGTITA-LKNHQSYEITTFRIEKGHIKHRKPKELVFSVHLTDDLKRRDFSMNAIA 123
Query: 627 LGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
+ D F G ++ + + VG+ +R ED LRI+R RF + K + +E
Sbjct: 124 YSPTKGLIDPFKGQNAIENQMIECVGEARLRFFEDALRILRSLRFSATLGFKIAPNTKEA 183
Query: 807 LXVLKNNVHGLGNISGERIWGELKK 881
+ K+ L ++S ER+ EL K
Sbjct: 184 VFACKDL---LKHLSKERLQSELNK 205
>UniRef50_Q2B3W5 Cluster: TRNA nucleotidyltransferase; n=1; Bacillus
sp. NRRL B-14911|Rep: TRNA nucleotidyltransferase -
Bacillus sp. NRRL B-14911
Length = 400
Score = 108 bits (260), Expect = 2e-22
Identities = 75/208 (36%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Frame = +3
Query: 264 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 443
+F + L+KI + +E GG+VRD L+G D+D AT+ATP E+K +F R
Sbjct: 8 VFLKAAPVLEKI-ETAGYEAYFVGGSVRDYLLGKDISDVDIATSATPMEIKGIFP----R 62
Query: 444 MINVNGERHGTITARINDKENFEVTTLRIDMVTDG--RFADVQFTKDWKLDANRRDLTIN 617
+V G HGT+ + D +++EVTT R + + R + V F + D RRD +N
Sbjct: 63 TADV-GIEHGTVIV-LYDGDSYEVTTFRSESDYEDFRRPSKVDFIRSLDEDLKRRDFRMN 120
Query: 618 SMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHE 797
SM + DG + D F G ED++ +R+A VG+P R ED LR+MR RF +++ + D
Sbjct: 121 SMAMSKDGRIIDPFGGQEDIRSKRIATVGNPLERFYEDALRMMRAVRFASQLSFQIDG-- 178
Query: 798 EETLXVLKNNVHGLGNISGERIWGELKK 881
ET L + + L I+ ER E +K
Sbjct: 179 -ETYEALVSEAYLLEKIAVERKLAEFEK 205
>UniRef50_A6DP87 Cluster: Putative poly(A) polymerase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative poly(A)
polymerase - Lentisphaera araneosa HTCC2155
Length = 385
Score = 108 bits (260), Expect = 2e-22
Identities = 74/200 (37%), Positives = 108/200 (54%), Gaps = 1/200 (0%)
Frame = +3
Query: 285 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGE 464
D +IF K +I I GGAVRD L+G+ D+D A+ P + K++ + + + G
Sbjct: 4 DFCEIFGK---DIYIVGGAVRDRLLGIDVVDIDIASAIHPYDFKDLSKSLGYKTFDT-GI 59
Query: 465 RHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGS 644
HGT+T I+ K +E TT R D+ DGR A+V F+K + D +RRD TIN++ L
Sbjct: 60 EHGTVTVLIDGKP-YEHTTFRTDVSCDGRNANVSFSKTIEEDLSRRDFTINAIAL-LGKK 117
Query: 645 VYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKN 824
+ D F G DL+ + + VG + R EDYLRI+R RF R+ + D + L K
Sbjct: 118 IIDPFNGQNDLKNKILKTVGTAEERFSEDYLRIIRAARFASRLKMSIDT---DLLIAAKE 174
Query: 825 NVHGL-GNISGERIWGELKK 881
+ ++S ERI E KK
Sbjct: 175 LAPKITQHVSVERISDEFKK 194
>UniRef50_Q5KXX0 Cluster: CCA-adding enzyme; n=4; Bacillaceae|Rep:
CCA-adding enzyme - Geobacillus kaustophilus
Length = 404
Score = 107 bits (257), Expect = 4e-22
Identities = 68/205 (33%), Positives = 112/205 (54%), Gaps = 2/205 (0%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
E+ + + + ++ +E GGAVRDLL+G D+D AT+A PEE+ +F + I+
Sbjct: 6 EQALGIIRQLKRHGYEAYFVGGAVRDLLIGRAIGDVDIATSALPEEVMRLFP----KTID 61
Query: 453 VNGERHGTITARINDKENFEVTTLRIDMVTDG--RFADVQFTKDWKLDANRRDLTINSMF 626
V G +HGT+ +++ +EVTT R D + R V F + + D RRD T+N++
Sbjct: 62 V-GSKHGTVVV-VHEGTAYEVTTFRTDGDYEDHRRPESVTFVRSLEEDLKRRDFTMNAIA 119
Query: 627 LGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
+ G++ D F G E +++R + VG D R +ED LR+MR RF ++ E+T
Sbjct: 120 MDERGTIIDPFGGQEAIERRLICTVGAADERFREDALRMMRAVRFVSQLGFA---LSEDT 176
Query: 807 LXVLKNNVHGLGNISGERIWGELKK 881
+ N + +IS ER+ E++K
Sbjct: 177 KSAIVQNAPLMAHISVERMTMEMEK 201
>UniRef50_A3IG30 Cluster: TRNA nucleotidyltransferase; n=1; Bacillus
sp. B14905|Rep: TRNA nucleotidyltransferase - Bacillus
sp. B14905
Length = 392
Score = 106 bits (254), Expect = 9e-22
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E I GGAVRD L+ D+D AT A PEE+K +F R +++ G +HGT+ I
Sbjct: 23 EAVIVGGAVRDALLNRPAHDVDVATNALPEEVKTVFQ----RTVDI-GIQHGTVLV-IVP 76
Query: 498 KENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYE 671
EVTT R D TD R D VQF + + D RRD T+N++ + DGS DY+ G +
Sbjct: 77 AGPVEVTTYRTDGEYTDHRRPDKVQFVRSLQDDLQRRDFTMNAIAMRRDGSFVDYYGGRQ 136
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
D+ R + VGD R ED LR++R RF ++ E+TL +++ + I+
Sbjct: 137 DIDLRIIRAVGDAQKRFAEDALRMLRAIRFSAQLDF---TIAEDTLMAIQHRAADIAFIA 193
Query: 852 GERIWGELKK 881
ERI EL K
Sbjct: 194 KERIKAELDK 203
>UniRef50_Q8EQD6 Cluster: CCA-adding enzyme; n=1; Oceanobacillus
iheyensis|Rep: CCA-adding enzyme - Oceanobacillus
iheyensis
Length = 400
Score = 105 bits (253), Expect = 1e-21
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 2/191 (1%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+E GG VRDLL+ D+D AT+ATP E+ +F ++I V G HGT+ R +
Sbjct: 21 YEGYFVGGCVRDLLLQKDIHDIDIATSATPNEVMHLFK----KVIPV-GIEHGTVIVR-H 74
Query: 495 DKENFEVTTLRID-MVTDGRFA-DVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGY 668
E++EVTT R D TD R DV+F + D RRD TIN++ + G + D F+G
Sbjct: 75 GGESYEVTTYRQDGEYTDHRRPNDVRFVTNLAEDLRRRDFTINALAMDTSGQITDLFHGQ 134
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNI 848
+DL+K+ + VG+ + R ED LRI+R RF ++ E + V++ + ++
Sbjct: 135 DDLKKKLIRTVGNAEERFTEDALRILRAVRFSSQLGCTIQEDTLEAMFVIRKQIQ---HL 191
Query: 849 SGERIWGELKK 881
+ ERI EL K
Sbjct: 192 AVERITIELTK 202
>UniRef50_Q7UWK0 Cluster: Poly A polymerase; n=1; Pirellula sp.|Rep:
Poly A polymerase - Rhodopirellula baltica
Length = 427
Score = 103 bits (247), Expect = 6e-21
Identities = 70/194 (36%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF-------TAEEVRMINVNGERHGTITA 485
+AGG VRD L+G PKD D AT ATPE ++E+F E +I V R
Sbjct: 40 LAGGCVRDALLGRKPKDFDVATDATPESVREVFGKRNTLAFGESFGVIGVLPPRSAVTEE 99
Query: 486 RINDKENFEVTTLRID-MVTDGRFADVQFTKDWKLDANRRDLTINSMFLG-FDGSVYDYF 659
EV T R D +DGR D D + DA RRD TIN MF F+ V DY
Sbjct: 100 PSAKLMPTEVATFRADGNYSDGRRPDSVTYGDAEADAMRRDFTINGMFYDLFESKVIDYV 159
Query: 660 YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGL 839
G +DL+K + +G R +ED LR++R RF + + E +T ++N+ +
Sbjct: 160 GGIQDLEKGHLRTIGKAVQRFEEDKLRMLRAVRFATTLGF---SIEYKTFAAIQNHASDI 216
Query: 840 GNISGERIWGELKK 881
+SGERI E+++
Sbjct: 217 SVVSGERIGAEMRR 230
>UniRef50_Q81ST6 Cluster: CCA-adding enzyme; n=11; Bacillus cereus
group|Rep: CCA-adding enzyme - Bacillus anthracis
Length = 397
Score = 102 bits (245), Expect = 1e-20
Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 2/191 (1%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
HE GG+VRDL++ D+D AT+A PEE+ +F R + V G HGT+ +
Sbjct: 19 HEAYFVGGSVRDLIIDRPIGDIDIATSALPEEVMAIFP----RHVPV-GLEHGTVIV-VE 72
Query: 495 DKENFEVTTLRIDMVTDG--RFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGY 668
+ E +EVTT R + + R + VQF + + D RRD T+N++ + +G + D F G
Sbjct: 73 NGEPYEVTTFRTESEYEDFRRPSSVQFVRSLEEDLKRRDFTMNAIAMTEEGEMVDLFAGQ 132
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNI 848
E +QKR + VG+ R +ED LR+MR RF + + E +T ++ H L +I
Sbjct: 133 EAIQKREIVTVGNAADRFQEDALRMMRGIRFVSTLGF---SLETKTKQAIETYGHLLEHI 189
Query: 849 SGERIWGELKK 881
+ ERI E +K
Sbjct: 190 AIERITVEFEK 200
>UniRef50_Q7P2R0 Cluster: POLY(A) POLYMERASE; n=3; Fusobacterium
nucleatum|Rep: POLY(A) POLYMERASE - Fusobacterium
nucleatum subsp. vincentii ATCC 49256
Length = 451
Score = 101 bits (242), Expect = 2e-20
Identities = 72/212 (33%), Positives = 104/212 (49%), Gaps = 7/212 (3%)
Frame = +3
Query: 267 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRM 446
F E I + +KY I GGA+RD+L+GL PKD+DF T +K +F+ +
Sbjct: 9 FNEVEIKILNKLNKYGKGY-IVGGAIRDILLGLKPKDVDFTTNLPYGTLKTLFSEYTPKE 67
Query: 447 INVNGERHGTITARINDKENFEVTTLRIDMVT--DG-----RFADVQFTKDWKLDANRRD 605
G+ G + RIN+ + +E+ R D DG V F D + D RRD
Sbjct: 68 ---TGKSFGVLRIRINNID-YEIAKFRKDNYEEKDGLKIIPEEKKVSFVDDIRNDLARRD 123
Query: 606 LTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKP 785
TIN+M + D + G +D++ R + FVG + R+ ED LR++R FRF R+
Sbjct: 124 FTINAMAYNQKEGIIDLYNGQKDIENRIINFVGKSEERIIEDPLRVLRAFRFMSRLNF-- 181
Query: 786 DNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ E T+ +K L NIS ERI E K
Sbjct: 182 -SLSENTIEAIKKQKELLKNISEERITMEFSK 212
>UniRef50_Q6MM27 Cluster: Poly A polymerase; n=1; Bdellovibrio
bacteriovorus|Rep: Poly A polymerase - Bdellovibrio
bacteriovorus
Length = 397
Score = 100 bits (239), Expect = 6e-20
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+AGG VRD L+G+ DLD AT ATPE+++ +F+ + +NV G+ G + + + +
Sbjct: 30 LAGGCVRDALLGVQAHDLDLATNATPEKVESLFS----KTVNV-GKSFGVMRVLV-EGAD 83
Query: 507 FEVTTLRID-MVTDGRFADVQFTKDWKLDANRRDLTINSMFLGF-DGSVYDYFYGYEDLQ 680
EV T R D +DGR + + DA RRD T+N++F V DY G +DL+
Sbjct: 84 IEVATFRNDGTYSDGRRPENVVFSSPQEDAQRRDFTVNALFYDLATAQVLDYVEGQKDLK 143
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
R + VGD + R +ED+LR++R RF ++ + E + +K + ++SGER
Sbjct: 144 ARVLRTVGDAERRFEEDHLRLLRAARFSAQLNFE---LEPVSFAAVKKMAEKVKSVSGER 200
Query: 861 IWGELKK 881
I E+ K
Sbjct: 201 IREEMTK 207
>UniRef50_Q1ASB2 Cluster: Polynucleotide adenylyltransferase region;
n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Polynucleotide adenylyltransferase region - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 510
Score = 100 bits (239), Expect = 6e-20
Identities = 70/192 (36%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E+ + GG VRD L G +++D AT A P E+K + M +V GER GTI A + D
Sbjct: 27 ELYLVGGYVRDALSGRRGEEVDAATDARPPEIKRLLRPHAGYMWDV-GERFGTIGAAV-D 84
Query: 498 KENFEVTTLRIDMVTDG-RFADVQFTKDWKLDANRRDLTINSMFL-GFDGSVYDYFYGYE 671
EVTT R D +G R +V F + D RRD TIN++ G + D F G
Sbjct: 85 GYRVEVTTYRSDRYAEGDRHPEVSFGESLMGDLARRDFTINAVAADALSGGIIDPFEGRR 144
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIAL--KPDNHEEETLXVLKNNVHGLGN 845
DL+ + VGDP R++ED LR++R RF ++ KP + ++ N L +
Sbjct: 145 DLELGIIRPVGDPLERMREDPLRMLRAVRFVATLSTPEKPFEMTADLERAIRENARWLES 204
Query: 846 ISGERIWGELKK 881
IS ERI E +
Sbjct: 205 ISAERIREEFDR 216
>UniRef50_A1HMM1 Cluster: Polynucleotide adenylyltransferase; n=1;
Thermosinus carboxydivorans Nor1|Rep: Polynucleotide
adenylyltransferase - Thermosinus carboxydivorans Nor1
Length = 302
Score = 99 bits (238), Expect = 7e-20
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
IAGGAVRDL+ G D D AT+A PE ++E+ + ++++ G +G + + D
Sbjct: 25 IAGGAVRDLVAGRPVNDYDIATSARPEAVREIAARQGWQVVDKLGTNYGVVMVVV-DGTG 83
Query: 507 FEVTTLRIDMVTDG--RFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQ 680
EV T R + + R A+V + D +RRD T+N+M + G++ D F G DL
Sbjct: 84 VEVATFRGERYGEDSHRPAEVWYADTITDDLSRRDFTVNAMAMDVAGNIIDPFGGRRDLA 143
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
R + VGDP+ R ED LR++R RF ++ D + TL + N+ + +S ER
Sbjct: 144 ARLIRTVGDPNRRFGEDALRMLRACRFAAQLGFAID---DVTLAAIPANLGRMAGLSLER 200
Query: 861 IWGELKK 881
+ EL K
Sbjct: 201 VRLELDK 207
>UniRef50_A0Z581 Cluster: Poly(A) polymerase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Poly(A) polymerase -
marine gamma proteobacterium HTCC2080
Length = 417
Score = 99 bits (238), Expect = 7e-20
Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 13/174 (7%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
I GGAVRDL++G PKD D AT ATPEE+K +F R + G R + R + +E
Sbjct: 29 IVGGAVRDLILGGKPKDFDVATNATPEEIKGLF-----RSARIIGRRFQIVHVR-DGREI 82
Query: 507 FEVTTLRIDMVTD--GRFADVQFTKDWKL----------DANRRDLTINSMFLG-FDGSV 647
EVTT R V++ G+ A Q K L DA RRDLTIN+M+ D SV
Sbjct: 83 IEVTTYRGPHVSEGSGKSASKQSDKGLLLRDNVYGTLAEDAARRDLTINAMYYNPIDESV 142
Query: 648 YDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL 809
D G++D+ R V +GDP R +ED +R++R RF ++ ++ E +
Sbjct: 143 LDQMDGHQDINARLVRILGDPQTRYREDPVRMLRVVRFAAKLQFDIESETESAI 196
>UniRef50_UPI0000E87F63 Cluster: poly(A) polymerase; n=1;
Methylophilales bacterium HTCC2181|Rep: poly(A)
polymerase - Methylophilales bacterium HTCC2181
Length = 411
Score = 97.9 bits (233), Expect = 3e-19
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 6/210 (2%)
Frame = +3
Query: 270 TEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMI 449
++ I++ K+ K +E I GGA+RD+LM PKD D AT ATPE++K +F R
Sbjct: 28 SKHAIEIIKVLKKNNYEAYIVGGAIRDILMNKNPKDFDIATDATPEQIKLLF-----RRS 82
Query: 450 NVNGERHGTITARINDKENFEVTTLRI-----DMVTDGRFADVQFTKDWKLDANRRDLTI 614
+ G R + ++ + EV+T R +++ +G D ++ K DA RRD T
Sbjct: 83 RIIGRRFKLVHV-MDGRGIIEVSTFRAKPHNKEVMRNGVTKDNEY-GTLKEDAERRDFTC 140
Query: 615 NSMFLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDN 791
NS++ + D + G +D++ +++A +GDP R ED +RI+R RF ++ L D
Sbjct: 141 NSIYYNPLTKVLIDLYGGVKDIRAKKLAMIGDPKKRFDEDSVRILRAIRFSAKLNLTIDK 200
Query: 792 HEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ E + K+ L +I R++ E+ K
Sbjct: 201 NILEAIESKKSQ---LQSIPYSRLFDEIMK 227
>UniRef50_A7H723 Cluster: Poly(A) polymerase; n=2;
Anaeromyxobacter|Rep: Poly(A) polymerase -
Anaeromyxobacter sp. Fw109-5
Length = 548
Score = 97.9 bits (233), Expect = 3e-19
Identities = 65/174 (37%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Frame = +3
Query: 312 KHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARI 491
+H GG VRDLL+G PKD D AT A P E++ +F R+I G R
Sbjct: 66 RHRAYFVGGCVRDLLLGAKPKDFDVATDAHPGEVRAIF--RNCRLI---GRRFRLAHVYF 120
Query: 492 NDKENFEVTTLRIDMVTDGRFA----DVQFTKD-----WKLDANRRDLTINSMFLGF-DG 641
+ EV T R + V G D+ T+D + DA RRD T+N +F G
Sbjct: 121 RGGKVIEVATFRKNPVDVGEDVPDTDDLLITRDNVFGTAEEDAVRRDFTVNGLFYDVATG 180
Query: 642 SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIA--LKPDNHE 797
V DY G EDL+ RR+A +GDP++R++ED +R++R RF R+ + PD E
Sbjct: 181 EVIDYVGGREDLEARRIATIGDPEIRMREDPVRLLRAVRFAARLGFIIAPDTFE 234
>UniRef50_Q6MEY5 Cluster: Putative poly A polymerase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative poly A polymerase - Protochlamydia amoebophila
(strain UWE25)
Length = 412
Score = 97.5 bits (232), Expect = 4e-19
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Frame = +3
Query: 264 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 443
+F + I + K+ K H AGG VRD +MG +D+D AT ATP ++ ++F
Sbjct: 3 VFKQAKIIVTKLV-KAGHTAYFAGGWVRDYVMGHPSEDIDIATDATPAQIMDIFP--NTL 59
Query: 444 MINVNGERHGTITARINDKENFEVTTLRIDM-VTDGRFADVQFTKDWKLDANRRDLTINS 620
++ G G + + + FEV T R D+ DGR + DA RRD TIN
Sbjct: 60 LV---GLAFGVVIV-VWEGHQFEVATFRKDLDYVDGRHPSGIVLSTAREDALRRDFTING 115
Query: 621 MFLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHE 797
MF +YD+ G ED+++ + +G+P R +ED LR++R FRF R +
Sbjct: 116 MFYDPLKEVIYDFVNGQEDIRRHLIRAIGNPHERFQEDRLRMLRAFRFSARFGFAIELET 175
Query: 798 EETLXVLKNNVHGLGNISGERIWGELKK 881
++ + +N ++ ERIW E KK
Sbjct: 176 QQ--AIFENAEQLFPAVAIERIWQEFKK 201
>UniRef50_Q8F4S0 Cluster: Poly(A) polymerase; n=4; Leptospira|Rep:
Poly(A) polymerase - Leptospira interrogans
Length = 432
Score = 97.1 bits (231), Expect = 5e-19
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Frame = +3
Query: 264 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 443
IF E+++ + +I K E + GG+VRDL + PK+ D T+ PE++ +F R
Sbjct: 16 IFLEDILHITQIIRKEGGECYLVGGSVRDLALSKIPKEFDLTTSLLPEKILSLFK----R 71
Query: 444 MINVNGERHGTITARINDKENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTIN 617
I G +HGT+T I D+ +E+TT R D DGR + V+F D RRD T+N
Sbjct: 72 TI-PTGIKHGTVTVLIQDRA-YEITTFRKDADYLDGRRPEIVEFGVSLSEDLKRRDFTMN 129
Query: 618 SMFLGFD-GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNH 794
++ + ++ D G D+Q + + +G+P R ED LR +R RF + + +
Sbjct: 130 ALAFDLETKALIDEHSGLLDIQNKIIRTIGNPIERFTEDGLRPIRAIRFVSSLGFHLEPN 189
Query: 795 EEETLXVLKNNVHGLGNISGERIWGELKK 881
+ + + KN +S ER+ EL K
Sbjct: 190 TAKAIILCKNVT---AKVSRERVHDELNK 215
>UniRef50_Q1YQK0 Cluster: Poly(A) polymerase; n=1; gamma
proteobacterium HTCC2207|Rep: Poly(A) polymerase - gamma
proteobacterium HTCC2207
Length = 453
Score = 97.1 bits (231), Expect = 5e-19
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
Frame = +3
Query: 246 SPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 425
SP+ + +V+D + K E + GG VRDLL+GL PKD D AT+A P E+KE+F
Sbjct: 32 SPDMINRDAFKVVD---VLQKAGFEAYVVGGCVRDLLIGLKPKDFDVATSAKPWEVKELF 88
Query: 426 TAEEV-----RMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLD 590
+ ++++V R + + R G + D
Sbjct: 89 RRSRIIGRRFQIVHVQFSREIIEVTTFRSNSSQSTSKNRRQQTDSGMLTRDNVFGTVEED 148
Query: 591 ANRRDLTINSMFLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYG 767
A+RRDLT+N+++ S++D+ G +D+ + + +GDP+ R +ED +R++R RF
Sbjct: 149 ASRRDLTVNALYYDPSTNSIHDFTNGIDDVDAKIIRIIGDPETRFREDPVRLLRVARFAA 208
Query: 768 RIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
++ N E T +K+ L +S R++ E K
Sbjct: 209 KLGF---NIEPATANPMKHRAADLQQVSPPRLFDETLK 243
>UniRef50_Q7VFG8 Cluster: Poly(A) polymerase; n=1; Helicobacter
hepaticus|Rep: Poly(A) polymerase - Helicobacter
hepaticus
Length = 468
Score = 96.7 bits (230), Expect = 7e-19
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 8/209 (3%)
Frame = +3
Query: 228 IVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTP------KDLDFA 389
I+ K+ + F +EV+ + + +E I GG VRD+L+ D D
Sbjct: 32 ILSKMKTHIFTPTLPKEVLYILESLQSAGYEAYIVGGCVRDMLLAQNSHIPYVINDYDIT 91
Query: 390 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRID--MVTDGRFADV 563
T+A P+E+ ++F A + G ++GTI+ I + +++EVTT RID + +V
Sbjct: 92 TSALPQEVMKLF-AHTIH----TGLKYGTISVLI-ESQSYEVTTFRIDGSYINARSPKNV 145
Query: 564 QFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRI 743
FT+ D RRD TIN++ + D G DLQ +R+ VGD R+ ED LRI
Sbjct: 146 TFTRSLAQDLQRRDFTINALAYAPCSGLIDEVGGLADLQHKRIVCVGDAFARLNEDILRI 205
Query: 744 MRYFRFYGRIALKPDNHEEETLXVLKNNV 830
+R RF + + D H +E + L + V
Sbjct: 206 LRALRFSSTLGFEIDFHTKEAIFSLSSKV 234
>UniRef50_A6CGS1 Cluster: Metal dependent phosphohydrolase; n=1;
Planctomyces maris DSM 8797|Rep: Metal dependent
phosphohydrolase - Planctomyces maris DSM 8797
Length = 422
Score = 96.7 bits (230), Expect = 7e-19
Identities = 68/188 (36%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Frame = +3
Query: 330 AGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE-N 506
AGG VRDLL+ PKD D AT A PEE++ +F + G G I R + + +
Sbjct: 27 AGGCVRDLLLQKEPKDYDVATNALPEEVRTLFGKRRTLAV---GASFGVIIVRGHQPDCD 83
Query: 507 FEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSMFLG-FDGSVYDYFYGYEDL 677
E+ T R + DGR + V+FT + DA RRD TIN MF + S++DY G DL
Sbjct: 84 VEIATFRSEGPYLDGRRPEHVKFTTA-EEDAQRRDFTINGMFYDPINDSLFDYVGGKADL 142
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
+ + +G+P R++ED LR++R RF + + EE T ++ + +S E
Sbjct: 143 NQHIIRAIGNPLERMQEDKLRLLRAIRFAATLHFQ---LEESTRQAVQTMADQINVVSPE 199
Query: 858 RIWGELKK 881
RI EL+K
Sbjct: 200 RIADELRK 207
>UniRef50_Q92AA3 Cluster: CCA-adding enzyme; n=11; Listeria|Rep:
CCA-adding enzyme - Listeria innocua
Length = 393
Score = 96.3 bits (229), Expect = 9e-19
Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E GG+VRD L+ D+D AT+A PEE+KE+F + G HGT+T R N
Sbjct: 21 EAYFVGGSVRDYLLNRPISDVDIATSAFPEEVKEIFQSTYD-----TGIAHGTVTVREN- 74
Query: 498 KENFEVTTLRIDMVTDG--RFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYE 671
KE +EVTT R + + R ++V F + + D RRD T+N++ + + ++D F G
Sbjct: 75 KECYEVTTFRTEGTYEDFRRPSEVTFIRSLEEDLLRRDFTMNAIAMDENFKLHDPFSGQL 134
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
+Q + + VG R ED LR+MR RF ++ + D +ET L N + L + S
Sbjct: 135 AIQNKEIKAVGKASERFHEDALRMMRAVRFLSQLDFQLD---KETETALTNQIALLQHTS 191
Query: 852 GERI 863
ERI
Sbjct: 192 VERI 195
>UniRef50_A3DF92 Cluster: Metal dependent phosphohydrolase; n=1;
Clostridium thermocellum ATCC 27405|Rep: Metal dependent
phosphohydrolase - Clostridium thermocellum (strain ATCC
27405 / DSM 1237)
Length = 442
Score = 95.5 bits (227), Expect = 2e-18
Identities = 66/185 (35%), Positives = 92/185 (49%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
I GG +RD ++G P D D AT A PE++K +F I G +HGT+TA IN N
Sbjct: 29 IVGGCIRDAILGKVPADWDVATDAQPEDVKLIFDK-----IVETGIKHGTVTAVINGC-N 82
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKR 686
+E+TT R A + KD D RD TIN+M + + D F G +D++K
Sbjct: 83 YEITTFRAPSS-----AKIPTIKD---DLGLRDFTINAMAYHPEEGIIDPFLGMQDMEKS 134
Query: 687 RVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIW 866
+ VG P+ R ED LR++R R + + D L +K N + +S ERI
Sbjct: 135 VIRAVGSPEDRFHEDPLRMLRAVRLSSTLGFEID---RSVLSAIKENCKLIEKVSPERIR 191
Query: 867 GELKK 881
EL K
Sbjct: 192 DELSK 196
>UniRef50_Q73NW9 Cluster: PolyA polymerase family protein; n=1;
Treponema denticola|Rep: PolyA polymerase family protein
- Treponema denticola
Length = 448
Score = 95.1 bits (226), Expect = 2e-18
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 3/207 (1%)
Frame = +3
Query: 270 TEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMI 449
++++ ++ +F + GGAVRD +G KD D AT A P+E++ +F R
Sbjct: 6 SKKMSEIASVFFNAGFSAYLVGGAVRDWFLGKPCKDYDIATDAEPKEVQALF-----RKT 60
Query: 450 NVNGERHGTITARINDKENFEVTTLRIDM-VTDGRF-ADVQFTKDWKLDANRRDLTINSM 623
G HGT+T D E E TT R + +DGR V + + + D +RRD T+N++
Sbjct: 61 IPTGIAHGTVTILYKD-EKIECTTFRCEADYSDGRRPQSVNYVRSIEEDLSRRDFTMNAI 119
Query: 624 FLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEE 800
+ DGS+ D F G + ++ + + VG P R ED LR +R RF ++ K EE
Sbjct: 120 AVSLKDGSIVDPFDGVKSIKSKTIKTVGSPLDRFGEDGLRPIRAIRFASQLGFK---IEE 176
Query: 801 ETLXVLKNNVHGLGNISGERIWGELKK 881
ETL + ++ +S ER E K
Sbjct: 177 ETLKAIPLSIEVCKKVSIERFRDEFVK 203
>UniRef50_Q1LJ89 Cluster: Poly(A) polymerase; n=1; Ralstonia
metallidurans CH34|Rep: Poly(A) polymerase - Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Length = 529
Score = 95.1 bits (226), Expect = 2e-18
Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 26/243 (10%)
Frame = +3
Query: 231 VIKVDSPEFK-SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPE 407
V+ VD ++ + + + + ++ I GGAVRDLL+G+ PKD D AT ATPE
Sbjct: 28 VVGVDEHRIDPALISRNAVKVTSTLQQAGYQAFIVGGAVRDLLLGIKPKDFDVATNATPE 87
Query: 408 EMKEMFTAEEV-----RMINVN--GERH------GTITARIND------KENFEVTTLRI 530
+++ +F + ++++V G R T A ++ E + +
Sbjct: 88 QVQALFRRSRIIGRRFQIVHVTFYGGREQEIIEVSTFRALVDAVASETLPEGRRLKRAEL 147
Query: 531 DMVTDGRFADVQFTKD--WKL---DANRRDLTINSMFLGFDG-SVYDYFYGYEDLQKRRV 692
D T A + +D W DA RRD TIN+M+ +V+DY +G ED++ R +
Sbjct: 148 DSKTHAIDASGRVLRDNVWGTQAEDAERRDFTINAMYYDPAAQTVHDYHHGMEDIRARTL 207
Query: 693 AFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGE 872
+GDP R +ED +R++R RF + D+H E + L + +H N+ R++ E
Sbjct: 208 RMIGDPVTRYREDPVRMLRVVRFAAKTGFSIDDHTREPIVGLASLIH---NVPSARLFDE 264
Query: 873 LKK 881
+ K
Sbjct: 265 MLK 267
>UniRef50_Q8DUL8 Cluster: CCA-adding enzyme; n=44;
Streptococcaceae|Rep: CCA-adding enzyme - Streptococcus
mutans
Length = 401
Score = 95.1 bits (226), Expect = 2e-18
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 2/209 (0%)
Frame = +3
Query: 261 SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 440
S F E + L+KI E GG+VRD+L+G D+D A+++ PEE K++F
Sbjct: 8 SEFQEALPVLEKI-KAAGFEAYFVGGSVRDVLLGHPIHDVDIASSSYPEETKKIFP---- 62
Query: 441 RMINVNGERHGTITARINDKENFEVTTLRI-DMVTDGRF-ADVQFTKDWKLDANRRDLTI 614
R +++ G HGT+ + + ++EVTT R D+ D R + V F + + D RRD TI
Sbjct: 63 RTVDI-GIEHGTVLV-LENGHDYEVTTFRTEDLYVDYRRPSQVSFVRSLEEDLKRRDFTI 120
Query: 615 NSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNH 794
N+ L ++ D F G DL+++ + VG+ R ED LRIMR RF ++ +
Sbjct: 121 NAFALDEKANIIDKFNGLVDLEQKILRAVGNAAERFNEDALRIMRGLRFAAQLNF---DI 177
Query: 795 EEETLXVLKNNVHGLGNISGERIWGELKK 881
E++T ++ + L IS ER + E K
Sbjct: 178 EKKTFIAMREHAPLLEKISVERSFIEFDK 206
>UniRef50_Q41GT8 Cluster: Polynucleotide adenylyltransferase; n=1;
Exiguobacterium sibiricum 255-15|Rep: Polynucleotide
adenylyltransferase - Exiguobacterium sibiricum 255-15
Length = 421
Score = 92.3 bits (219), Expect = 1e-17
Identities = 71/190 (37%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E I GGAVRD+L+ P D D AT+ PE + +F ++ G HGT+T + D
Sbjct: 60 EAYIVGGAVRDMLLKREPGDYDLATSLLPEAVMHLFP-----VVIPTGLDHGTVTV-VLD 113
Query: 498 KENFEVTTLRIDMV-TDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYE 671
FEVTT R + +D R D V + D RRD TIN+M L G V D F G
Sbjct: 114 HVPFEVTTFRSESTYSDRRRPDEVTLGVSLEEDLTRRDFTINAMALKPTGLV-DLFGGQA 172
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
DL + V VG + R ED LR++R FRF ++ D ET ++N L +++
Sbjct: 173 DLATKVVRTVGRAEDRFDEDALRMIRAFRFMSQLEFTLD---PETERAIENKKQHLSSVA 229
Query: 852 GERIWGELKK 881
ERI E +K
Sbjct: 230 VERIAIEFEK 239
>UniRef50_Q9PLM2 Cluster: Poly(A) polymerase family protein; n=7;
Chlamydiaceae|Rep: Poly(A) polymerase family protein -
Chlamydia muridarum
Length = 410
Score = 91.9 bits (218), Expect = 2e-17
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Frame = +3
Query: 291 KKIFDKYK---HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG 461
KKI K + ++ GG+VRD+L+ +++D AT A+P + +F +++ G
Sbjct: 10 KKIVQKLRNAGYQAYFVGGSVRDMLLDRPIEEVDIATNASPTIVTTIFPDT----LSI-G 64
Query: 462 ERHGTITARINDKENFEVTTLRIDM-VTDGRFADVQFTKDWKLDANRRDLTINSMFLG-F 635
G I + N + FEV T R D DGR + K DA RRD TIN M+ F
Sbjct: 65 AAFGIIAVKENG-QLFEVATFRSDEDYADGRHPNRVIFASMKDDAIRRDFTINGMYYDPF 123
Query: 636 DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXV 815
+ ++D G DL+++ V +G P R ED LRI+R RF + D E + +
Sbjct: 124 EEKLFDLVEGRADLERKVVRAIGHPKQRFLEDKLRILRAIRFAATLGFSLDPKTE--IAI 181
Query: 816 LKNNVHGLGNISGERIWGELKK 881
+K ++S ERIW ELKK
Sbjct: 182 IKEAPSLPTSVSPERIWQELKK 203
>UniRef50_Q6MBL7 Cluster: Putative Poly(A) polymerase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative Poly(A) polymerase - Protochlamydia amoebophila
(strain UWE25)
Length = 424
Score = 90.6 bits (215), Expect = 5e-17
Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG+VRDLL+ PKD D +T+A PE++K +F + + + G R R K
Sbjct: 38 LVGGSVRDLLLKRVPKDFDISTSARPEQIKAIFQRQCILI----GRRFRLAHIRFGHKI- 92
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDG-SVYDYFYGYEDLQK 683
EV+T R G + D RRD TIN +F S+ DY G+ED+QK
Sbjct: 93 IEVSTFRTGENDSGLILHDNEWGTPEEDVLRRDFTINGLFYDSSNHSIIDYVNGWEDVQK 152
Query: 684 RRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK 821
+ +G+P+ R K+D +R++R +F+ R K + E+ + V +
Sbjct: 153 HLLRTIGEPEKRFKQDPVRLLRLLKFHARYNFKIEEQTEQAIHVCR 198
>UniRef50_Q1IUE8 Cluster: Metal dependent phosphohydrolase; n=2;
Acidobacteria|Rep: Metal dependent phosphohydrolase -
Acidobacteria bacterium (strain Ellin345)
Length = 454
Score = 90.6 bits (215), Expect = 5e-17
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Frame = +3
Query: 282 IDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE-------EV 440
I++ K + H+ + GG VRDLL+G P D D AT A P+++ ++F V
Sbjct: 8 IEIVKTLRGHGHQAYLVGGCVRDLLLGRDPADYDVATDAIPDQVMKIFPKTWAVGAQFGV 67
Query: 441 RMINVNGERHGTITARINDKEN---FEVTTLRIDMV-TDGRFAD-VQFTKDWKLDANRRD 605
++ V E A + EV T R D V +DGR D V+F++D + D RRD
Sbjct: 68 VLVPVPDEPECDPEATHPQSHHHGCIEVATFRSDGVYSDGRHPDEVRFSQDPREDVQRRD 127
Query: 606 LTINSMFLG--FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIAL 779
TIN M L V D+ G DL + + +GDP R +ED LR++R RF R
Sbjct: 128 FTINGMLLDPLNHDEVLDFVGGRADLAAKIIRTIGDPRQRFEEDKLRMLRAVRFAARFEY 187
Query: 780 KPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ ET+ V++ + +S ER+ EL K
Sbjct: 188 E---IAPETMAVIQQLSPQISVVSHERVRDELTK 218
>UniRef50_Q126S3 Cluster: Poly(A) polymerase; n=9;
Burkholderiales|Rep: Poly(A) polymerase - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 550
Score = 90.6 bits (215), Expect = 5e-17
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 25/228 (10%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFT-----AEE 437
+ +D+ + + E + GGAVRDLL+GL PKD D AT ATPE++K +F
Sbjct: 51 DRAMDVVRTLKQAGFEAYVVGGAVRDLLVGLRPKDFDVATDATPEQVKSLFRRAFIIGRR 110
Query: 438 VRMINV---NGERHGTITARI---------------NDKEN-FEVTTLRIDMVTDGRFAD 560
R+++V G H I I N++ + E+ ++ + + GR
Sbjct: 111 FRIVHVIYGRGREHEVIEVSIFRAHLDSSLAEQVGGNERTSKSELAGMKHAVDSSGRVLR 170
Query: 561 VQFTKDWKLDANRRDLTINSMFLGFDGS-VYDYFYGYEDLQKRRVAFVGDPDVRVKEDYL 737
+ DA RRD TIN+M+ + V DY G D +K+ + +G+P VR +ED +
Sbjct: 171 DNVWGPLEEDAARRDFTINAMYYDPETQIVVDYHNGIRDAKKKIIRMIGNPAVRYREDPV 230
Query: 738 RIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
RI+R RF +++ E++T L+ L ++ R++ E+ K
Sbjct: 231 RIIRAVRFGAKLSALGFKFEDKTSAPLREMSSLLADVPQSRLFDEMLK 278
>UniRef50_Q88W02 Cluster: CCA-adding enzyme; n=10;
Lactobacillales|Rep: CCA-adding enzyme - Lactobacillus
plantarum
Length = 407
Score = 90.6 bits (215), Expect = 5e-17
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 2/191 (1%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+E GG VRD ++G D+D AT+A P E+K++F R ++ G HGT+ ++
Sbjct: 25 YEAYFVGGCVRDTILGKPLHDVDIATSAFPAEVKQLFK----RTVDT-GIEHGTVMI-LD 78
Query: 495 DKENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGY 668
+E TT R + D R D V F + K D RRD TIN++ + +G V D F G
Sbjct: 79 HGNGYETTTFRTESGYQDFRRPDQVTFVRSLKEDLKRRDFTINALAMTANGEVIDLFDGL 138
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNI 848
D+++ + VG + R ED LR+MR RF ++ ++ E+ + +N L I
Sbjct: 139 ADMEQGILRAVGVAEERFHEDALRMMRAVRFASQLGFTIESQTEQAIA---DNAALLAKI 195
Query: 849 SGERIWGELKK 881
+ ER E +K
Sbjct: 196 AVERTRVEWEK 206
>UniRef50_Q5ZVA2 Cluster: Poly(A) polymerase I; n=4; Legionella
pneumophila|Rep: Poly(A) polymerase I - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 436
Score = 90.2 bits (214), Expect = 6e-17
Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
I GG+VRDLL+ PKD D AT ATP E+K +F + R+I G R + + +E
Sbjct: 50 IVGGSVRDLLLHKAPKDFDIATNATPNEVKNLF--KNARII---GRRFKLVHILFH-REI 103
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKL-----------DANRRDLTINSMFLGF-DGSVY 650
EV T R +D A QF + L DA RRD TINS++ D S+
Sbjct: 104 IEVATFRGHNSSD---ASHQFNERGMLVRDNVYGSLDEDAWRRDFTINSLYYNISDSSII 160
Query: 651 DYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNV 830
D+ G ED++++ + +GDP R +ED +R++R RF ++ N ET
Sbjct: 161 DFTGGVEDVKQKLIRIIGDPVTRYQEDPVRMLRAVRFSAKLQF---NLSPETKAPFPKIS 217
Query: 831 HGLGNISGERIWGELKK 881
H + ++S R++ E+ K
Sbjct: 218 HLITHVSSSRLFDEITK 234
>UniRef50_A7HCV9 Cluster: tRNA cytidylyltransferase; n=2;
Anaeromyxobacter|Rep: tRNA cytidylyltransferase -
Anaeromyxobacter sp. Fw109-5
Length = 434
Score = 90.2 bits (214), Expect = 6e-17
Identities = 70/190 (36%), Positives = 96/190 (50%), Gaps = 5/190 (2%)
Frame = +3
Query: 327 IAGGAVRDLLM--GLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 500
+ GGAVRDLL+ D D AT A PE++ +F + G HGT+T +
Sbjct: 32 LVGGAVRDLLLHRARDANDFDVATPALPEQVAALFPK-----VIPTGIEHGTVTVLVGG- 85
Query: 501 ENFEVTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSMFLG-FDGSVYDYFYGYE 671
E EVTT R + DGR + V F +D + D RRD TIN++ L G + D F G
Sbjct: 86 EPIEVTTFRGEGEYKDGRRPESVTFHEDLEADLARRDFTINALALDPLAGELRDPFGGEA 145
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
DL++R + VGDP R ED LR MR RF ++ D EE ++ + + +S
Sbjct: 146 DLRRRLIRAVGDPVARFGEDGLRPMRAVRFAAQLGYSLDPATEE---AIRGALPIVRKVS 202
Query: 852 GERIWGELKK 881
ERI EL +
Sbjct: 203 RERIADELTR 212
>UniRef50_A6GIH1 Cluster: Polynucleotide adenylyltransferase region;
n=1; Plesiocystis pacifica SIR-1|Rep: Polynucleotide
adenylyltransferase region - Plesiocystis pacifica SIR-1
Length = 408
Score = 89.8 bits (213), Expect = 8e-17
Identities = 72/193 (37%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT---ARIND 497
+ GGAVRD L+G D D A+ ATPEE+ E+F + I G HGT+T R D
Sbjct: 26 VVGGAVRDALLGRDGGDWDVASNATPEEVIELFP----KTI-PTGLEHGTVTVLSGRGED 80
Query: 498 KENFEVTTLRID-MVTDGRF-ADVQFTKDWKLDANRRDLTINSM-FLGFDGSVYDYFYGY 668
+ E+TT R + DGR ++V+F +D D RRDLTIN++ + + + D F G
Sbjct: 81 RHAVELTTFRGEGAYHDGRRPSEVRFLRDLTEDLARRDLTINALAWDPVNAVLTDAFGGL 140
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI--ALKPDNHEEETLXVLKNNVHGLG 842
ED++ + VG+P+ R ED LR MR RF + AL P ET + +
Sbjct: 141 EDMRAGLIRAVGEPERRFNEDGLRTMRAVRFAATMGFALAP-----ETEAAIAGALEVFA 195
Query: 843 NISGERIWGELKK 881
+S ER+ EL K
Sbjct: 196 KVSRERVRVELVK 208
>UniRef50_Q04RG6 Cluster: TRNA nucleotidyltransferase; n=4;
Leptospira|Rep: TRNA nucleotidyltransferase - Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
Length = 489
Score = 89.4 bits (212), Expect = 1e-16
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Frame = +3
Query: 258 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 437
K++ E+ + + +K+ + I GG VRDLL+G PKD D T ATP ++K++F
Sbjct: 36 KNMIDEDAVKIIHRLNKFGFKAYIVGGGVRDLLLGRKPKDFDVVTNATPNQIKKIF--NN 93
Query: 438 VRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKL---------- 587
R+I G R + K EV+T R + D R +D+ +
Sbjct: 94 CRII---GRRFKIVHILFRGKV-IEVSTFR--SLPDYRLGKAVEDQDYLIKRDNKFGTPQ 147
Query: 588 -DANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRF 761
DA RRD TINS++ + S+ DY G+ED++ + + +GDPD+ +ED +R++R +F
Sbjct: 148 EDAARRDFTINSLYYDVRNDSIIDYVGGFEDIRNKILRVIGDPDISFREDPVRMLRAVKF 207
Query: 762 YGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ L + E+ T ++ + L S R+ E K
Sbjct: 208 AEILGL---DVEKTTSKAIRKHKAELEKASSSRMLEEYNK 244
>UniRef50_Q6AQS1 Cluster: Probable polyA polymerase; n=1;
Desulfotalea psychrophila|Rep: Probable polyA polymerase
- Desulfotalea psychrophila
Length = 497
Score = 89.0 bits (211), Expect = 1e-16
Identities = 59/154 (38%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG VRDL +G TPKD D +T A P +++++F + N G R + +
Sbjct: 90 LVGGGVRDLYLGKTPKDFDISTNARPGQLRKLF-----KNSNTIGRRFRLVQVFFKGGKT 144
Query: 507 FEVTTLR--IDMVTDGRFADVQFTKDWKL---DANRRDLTINSMFLGFD-GSVYDYFYGY 668
EV+TLR + DG A + + DA RRDLTINS+F + S+ DY G
Sbjct: 145 IEVSTLRSLSEHDLDGPEAILAPNNTFGTLDEDAQRRDLTINSLFYEIETHSIIDYVGGV 204
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGR 770
EDL+K V VGDP R+ D +RIMR R R
Sbjct: 205 EDLEKGIVRIVGDPKKRITRDPVRIMRAIRHCSR 238
>UniRef50_Q9HV72 Cluster: Poly(A) polymerase; n=30; cellular
organisms|Rep: Poly(A) polymerase - Pseudomonas
aeruginosa
Length = 467
Score = 88.6 bits (210), Expect = 2e-16
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Frame = +3
Query: 267 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV-- 440
F+ + + +I + ++ + GG VRD ++G+ PKD D AT+ATPE+++ F +
Sbjct: 38 FSRNAVKVVEILQRAGYQAYVVGGCVRDQMLGIAPKDFDVATSATPEQVRAEFRNARIIG 97
Query: 441 ---RMINVNGERH--GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRD 605
++++V+ R T R + E + R GR + DA RRD
Sbjct: 98 RRFKLVHVHFGREIIEVATFRAHHPEGQDDGDSRASSNESGRILRDNVYGSLEDDAQRRD 157
Query: 606 LTINSMFLGFDGS-VYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALK 782
TIN+++ + DY G D++ R + +GDP+ R ED +R++R RF ++ +
Sbjct: 158 FTINALYFDVTSERLLDYANGVHDIRNRLIRLIGDPEQRYLEDPVRMLRAVRFAAKLDFE 217
Query: 783 PDNH 794
+ H
Sbjct: 218 IEKH 221
>UniRef50_Q093R8 Cluster: Poly(A) polymerase; n=2;
Cystobacterineae|Rep: Poly(A) polymerase - Stigmatella
aurantiaca DW4/3-1
Length = 576
Score = 88.6 bits (210), Expect = 2e-16
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Frame = +3
Query: 306 KYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITA 485
++ H+ + GG VRDLL+G PKD D AT+A P E++ F R+I G R
Sbjct: 124 QHGHQAYLVGGCVRDLLLGRRPKDFDVATSAHPGEVRATF--RNCRLI---GRRFRLAHV 178
Query: 486 RINDKENFEVTTLRIDMVT------------DGRFADVQFTKD-----WKLDANRRDLTI 614
+ EV+T R + + +G D+ T D + DA RRD TI
Sbjct: 179 YFKGGKIIEVSTFRANPLEMEAPEEEGAENGNGNGDDLLITHDNVFGTAEQDARRRDFTI 238
Query: 615 NSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDN 791
N +F +G V DY G DL +R + +GDP++R++ED +RI+R RF ++ L +
Sbjct: 239 NGLFYDVTEGRVIDYVRGRRDLDERYIRTIGDPEIRMREDPVRILRAVRFASKLGL---D 295
Query: 792 HEEETLXVLKNNVHGLGNISGERIWGE 872
E T ++ V L + R+ E
Sbjct: 296 IESRTYAAMEGAVEDLPRCAPARLLEE 322
>UniRef50_Q9Z6U2 Cluster: Poly A Polymerase; n=9; Chlamydiaceae|Rep:
Poly A Polymerase - Chlamydia pneumoniae (Chlamydophila
pneumoniae)
Length = 430
Score = 88.2 bits (209), Expect = 2e-16
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Frame = +3
Query: 225 PIVIKVDSPEFK-SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTAT 401
P + V + K F+ + + K K + I GG +RDLL+ TPKD D +T+A
Sbjct: 26 PTIYSVSNHNIKLKDFSPHALSVIKTLRKAGYIAYIVGGCIRDLLLNTTPKDFDISTSAK 85
Query: 402 PEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKD- 578
PEE+K +F + + G+R R + K+ EV+T R TD DV TKD
Sbjct: 86 PEEIKAIF-----KNCILVGKRFRLAHIRFS-KQIIEVSTFRSGS-TD---EDVLITKDN 135
Query: 579 -W---KLDANRRDLTINSMFLGFD-GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRI 743
W + D RRD TIN +F + + DY G DL+ R + +GDP R K+D +R+
Sbjct: 136 LWGTPEEDVLRRDFTINGLFYDPEHEEIIDYTGGVNDLRNRYLRTIGDPFTRFKQDPVRM 195
Query: 744 MRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+R + R + +E L + L S R++ EL K
Sbjct: 196 LRLLKILSRSPFTVETQTQEALIACRQE---LIKSSQARVFEELIK 238
>UniRef50_Q6YRB3 Cluster: TRNA nucleotidyltransferase/polyA
polymerase; n=2; Candidatus Phytoplasma asteris|Rep:
TRNA nucleotidyltransferase/polyA polymerase - Onion
yellows phytoplasma
Length = 412
Score = 88.2 bits (209), Expect = 2e-16
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTP-KDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
E I GG VRD L+ + +D+D T A P+++K + E+ I +N +G+
Sbjct: 29 EAFIVGGTVRDYLLKINANEDIDITTAAAPQQIKLLLCPEKTTQIKIN---YGSFKITF- 84
Query: 495 DKENFEVTTLRID-MVTDGRF-ADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYF--- 659
+ FE+TT R + D R +++ FTK+ D RRD TIN++ + G ++D+
Sbjct: 85 ENYLFEITTYRKEGTYKDYRHPSEIFFTKNIHQDLLRRDFTINTLLMDETGKIFDFTPEK 144
Query: 660 YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGL 839
G +DL++ + + DP +R +ED LRI+R F F ++ + ++ + + KN H L
Sbjct: 145 QGKKDLKQGLIRTIKDPFIRFQEDPLRILRAFYFQSKLGFCIEKTTQKAI-IRKN--HLL 201
Query: 840 GNISGERIWGELKK 881
IS +RI+ ++K
Sbjct: 202 AKISSQRIYENIEK 215
>UniRef50_A5CWU4 Cluster: Poly(A) polymerase; n=2; sulfur-oxidizing
symbionts|Rep: Poly(A) polymerase - Vesicomyosocius
okutanii subsp. Calyptogena okutanii (strain HA)
Length = 383
Score = 88.2 bits (209), Expect = 2e-16
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Frame = +3
Query: 258 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 437
+S+ ++ + + I +K + + GG VRD L+ LTPKD D AT A PE++ ++F +
Sbjct: 12 RSLLDKDALKVINIINKAGFKAYLVGGCVRDFLLSLTPKDFDIATNAKPEQVHKLF--KR 69
Query: 438 VRMINVNGERHGTITARINDKENFEVTTLR---IDMVTDGRFADVQFTKDWKLDANRRDL 608
R+I G R + + ++ EV T R + + +G + + D RRDL
Sbjct: 70 SRLI---GRRFRLVHVMFSARKFIEVATFRSGKVQVANNGVVMRDNCYGNIEDDVVRRDL 126
Query: 609 TINSMFLGFD-GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKP 785
+IN+++ + V DY G +D++ + + +G+P R ++D +R++R RF ++
Sbjct: 127 SINALYYDIETQEVIDYVGGLQDIRVQELHVIGNPKKRFEQDPVRMIRVIRFQTKLDFHL 186
Query: 786 DNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
N E + LGNIS R++ E K
Sbjct: 187 SN---EIKSAIFEQAPLLGNISTIRLYEECIK 215
>UniRef50_A4E6N1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 464
Score = 88.2 bits (209), Expect = 2e-16
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 512
GG VRD LMG D+D + +E K A + ++ +G + G ITA I+D E E
Sbjct: 33 GGWVRDALMGYPSHDVDMCCSGLWQESKAALEAAGIAVVE-SGIKFGGITA-ISDGERIE 90
Query: 513 VTTLRID-MVTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKR 686
VTT R+D TDGR V+ + D RRD T+N+M + + D + G DL+++
Sbjct: 91 VTTYRLDGFYTDGRHPQSVERAASLEDDLARRDFTVNAMAWHPERGLVDRYDGQGDLERK 150
Query: 687 RVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIW 866
+ VGDP R ED LR++R RF R+ E ET L L ++ ER+
Sbjct: 151 LIRAVGDPKRRFNEDALRMLRAVRFACRLDFM---IEPETKRALAECAPLLDAVARERVG 207
Query: 867 GELK 878
EL+
Sbjct: 208 IELE 211
>UniRef50_Q9JZY9 Cluster: PolyA polymerase; n=4; Neisseria|Rep:
PolyA polymerase - Neisseria meningitidis serogroup B
Length = 453
Score = 87.8 bits (208), Expect = 3e-16
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GGAVRDLL+G+ PKD D AT ATPE++ ++F R + G R I +N E
Sbjct: 57 VVGGAVRDLLLGIEPKDFDVATDATPEQVHKLF-----RRSRIIGRRF-QIVHVMNGAET 110
Query: 507 FEVTTLR----IDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD-GSVYDYFYGYE 671
EVTT R + GR + DA RRD T N+++ + + D+ G
Sbjct: 111 IEVTTFRGGAKVHQNARGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKEEILDFHNGIA 170
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
D+ R+ +GD R +ED +RI+R R G++ + EET + ++ L +
Sbjct: 171 DVAAHRLVMIGDAAERYQEDPVRILRAIRLSGKLGFE---LSEETAAPIAESICRLKHEP 227
Query: 852 GERIWGELKK 881
R++ E+ K
Sbjct: 228 VARLFDEIMK 237
>UniRef50_Q1Q5Z9 Cluster: Similar to poly(A) polymerase; n=2;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
poly(A) polymerase - Candidatus Kuenenia stuttgartiensis
Length = 437
Score = 87.8 bits (208), Expect = 3e-16
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
+ I++ K + AGG VRD++M D D AT A P ++ +F + +
Sbjct: 5 QNAIEIVKTLQDKGFDALFAGGCVRDMIMRRESADYDIATNALPHDVMNLFK----KTFS 60
Query: 453 VNGERHGTITARINDKENFEVTTLRID-MVTDGRFADVQFTKDWKLDANRRDLTINSMFL 629
V G ++G + + D NFEV T R + +DGR D + D RRD TIN +
Sbjct: 61 V-GTQYGVVVV-VKDGHNFEVATFRTEKSYSDGRHPDYVSFSTAEEDVRRRDFTINGLLY 118
Query: 630 G-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
+ DY G +D+ + +GDP R+ ED LR++R RF R + EET
Sbjct: 119 DPVKKEMLDYVGGRDDIAAGIIRTIGDPVERLTEDKLRMIRAVRFACRFNF---HIHEET 175
Query: 807 LXVLKNNVHGLGNISGERIWGELKK 881
+ N + +S ERI EL+K
Sbjct: 176 RQAIINLAPQIHVVSAERIREELQK 200
>UniRef50_Q1NNS3 Cluster: Poly(A) polymerase, PcnB; n=2; delta
proteobacterium MLMS-1|Rep: Poly(A) polymerase, PcnB -
delta proteobacterium MLMS-1
Length = 460
Score = 87.8 bits (208), Expect = 3e-16
Identities = 67/196 (34%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
H + GG VRDLL+G +PKD D +T+A P E++++F R + G R +
Sbjct: 41 HTAYLVGGGVRDLLLGKSPKDFDISTSAKPGELRKIF-----RNSRIIGRRFRLVQVFFP 95
Query: 495 DKENFEVTTLRI--DMVTDG----RFADVQFTKDWKLDANRRDLTINSMFLGFDG-SVYD 653
+ EV+T R + DG A + DA RRDLTIN++F + +V D
Sbjct: 96 GGKIIEVSTFRCRSEFELDGSEVETLAQDNTFGNPAEDAFRRDLTINALFYEIETFTVID 155
Query: 654 YFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVH 833
Y G EDL+ R V VGDPD R+ D +R++R R R EE+T + +V
Sbjct: 156 YTGGVEDLRNRLVRLVGDPDRRLLRDPVRMLRAIRHAARAGFA---IEEQTWAAICRHVD 212
Query: 834 GLGNISGERIWGELKK 881
L R+ EL K
Sbjct: 213 KLALCPDSRLRDELFK 228
>UniRef50_O83294 Cluster: Polynucleotide adenylyltransferase; n=1;
Treponema pallidum|Rep: Polynucleotide
adenylyltransferase - Treponema pallidum
Length = 478
Score = 87.4 bits (207), Expect = 4e-16
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 500
I + GGAVRD L+ + D D AT A PE ++ +F R G HGT+T
Sbjct: 24 IYVVGGAVRDFLLNRSAHDWDLATDAPPERVRMLF-----RRTVPTGIEHGTVTILFRG- 77
Query: 501 ENFEVTTLRIDM-VTDGRFAD-VQFTKDWKLDANRRDLTINSMFLGF-DGSVYDYFYGYE 671
+ E TT R++ +D R D V F + D RRD T+N+ G + D GY
Sbjct: 78 HSIECTTFRVESDYSDRRHPDSVCFAARIEDDLARRDFTVNAFAAALPSGEIIDVCGGYA 137
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
DL+ + VGD R ED LR +R RF +++ + E + L+ + IS
Sbjct: 138 DLRNGLICSVGDAHARFSEDALRPLRAVRFAAQLSFSIEARTREAIIALRAHT---ARIS 194
Query: 852 GERIWGELKK 881
ER+ EL K
Sbjct: 195 RERVRDELSK 204
>UniRef50_A1RG69 Cluster: Poly(A) polymerase; n=15;
Gammaproteobacteria|Rep: Poly(A) polymerase - Shewanella
sp. (strain W3-18-1)
Length = 494
Score = 87.4 bits (207), Expect = 4e-16
Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 17/291 (5%)
Frame = +3
Query: 60 LATLIWNFFFVMLSACKRILGVGQFFQ--LRGTCSVTDPSRRRFRSKMDLNLKCRENPIV 233
+A +N +S C + QF + T P+ + +S+ + N +
Sbjct: 2 IAARFFNHITDHISRCPIFRRISQFCKQLFEDAPKTTAPTPAQIQSQAS---EASSNALS 58
Query: 234 IKVDSPEFKSIFTEEVID--LKKIF--DKYKHEIRIAGGAVRDLLMGLTPKDLDFATTAT 401
+++ + SI +++ + LK ++ +K + + GG VRDLL+GL PKD D T AT
Sbjct: 59 LELVPRDAHSISRKQISENALKVLYRLNKSGFKAYLVGGGVRDLLLGLEPKDFDVVTNAT 118
Query: 402 PEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLR---------IDMVT-DGR 551
PEE+K++F R V G R + + ++ EV T R I +GR
Sbjct: 119 PEEIKKLF-----RNCRVVGRRF-RLAHIVFGRDVIEVATFRGHHGESNEKISKANAEGR 172
Query: 552 FADVQFTKDWKLDANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKE 728
+ DA RRD T+N+++ D S+ Y G DL+ + +GDP+ R +E
Sbjct: 173 LLRDNVYGEIDEDAERRDFTVNALYYDISDYSIRSYGGGMADLKAGTLRLIGDPETRYRE 232
Query: 729 DYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
D +R++R RF ++++ N E+ T +K L +I R++ E+ K
Sbjct: 233 DPVRMLRAVRFATKLSM---NIEDVTAKPIKQLAPLLTDIPAARMYEEVLK 280
>UniRef50_A6T217 Cluster: Poly(A) polymerase; n=11;
Betaproteobacteria|Rep: Poly(A) polymerase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 455
Score = 87.0 bits (206), Expect = 6e-16
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GGAVRDLL+G+ PKD D AT ATPE++K +F R + G+R + ++
Sbjct: 57 LVGGAVRDLLLGVKPKDFDIATNATPEQVKRLF-----RRAFIIGKRFQIVHVMFG-QDL 110
Query: 507 FEVTTLR------IDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLG-FDGSVYDYFYG 665
EVTT R GR + DA RRD TIN+M+ +V DY G
Sbjct: 111 LEVTTFRGASTEAAPKDEHGRVLRDNTFGEQHEDALRRDFTINAMYYDPATQTVLDYHGG 170
Query: 666 YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGN 845
D++ + + +G P+ R +ED +R++R RF ++ D + V+ ++ N
Sbjct: 171 MADIRNKTLRIIGVPEARYREDPVRMLRVVRFAAKLNFSIDPDTSAPIRVMAPLIN---N 227
Query: 846 ISGERIWGELKK 881
+ R++ E+ K
Sbjct: 228 VPAARVFDEMLK 239
>UniRef50_A6FZN1 Cluster: Poly(A) polymerase; n=1; Plesiocystis
pacifica SIR-1|Rep: Poly(A) polymerase - Plesiocystis
pacifica SIR-1
Length = 486
Score = 86.6 bits (205), Expect = 7e-16
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV-----RMINV--NGERHG 473
HE + GG VRDL + PKD D AT+A PE+++ +F + ++ +V +
Sbjct: 52 HEAYLVGGCVRDLYLNRKPKDFDVATSARPEQIRRVFRNSRIIGRRFKLAHVFFGSKIIE 111
Query: 474 TITARINDKENFEVTTLRIDMVTD-GRFADVQFTKD--W---KLDANRRDLTINSMFLGF 635
T T R N KE T D + G D+ T D W K DA RRD TIN +F
Sbjct: 112 TSTFRTNPKEEEHAATSEGDAAAEGGGGGDLLITHDNSWGDIKDDARRRDFTINGLFYDI 171
Query: 636 D-GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
+ ++ D+ G DL + + +G+P+VR +ED +R++R +F R+
Sbjct: 172 ERRAIVDFVDGVRDLDRGIIRTIGEPEVRFREDPVRMIRAIKFAARL 218
>UniRef50_A0LF07 Cluster: Polynucleotide adenylyltransferase region;
n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Polynucleotide adenylyltransferase region -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 427
Score = 86.6 bits (205), Expect = 7e-16
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = +3
Query: 264 IFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 443
I +V+ + I H + + GGA+RD +G P+D D AT A+ +E+ +F R
Sbjct: 9 IVPPDVMAMMGILSDAGHGVWLVGGALRDHFLGQAPRDFDLATDASADEVVRLFP----R 64
Query: 444 MINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 623
+I + G RHGT+ ++ EVT+ T G + D RRD TIN++
Sbjct: 65 VIPI-GIRHGTVQVHTRTRD-VEVTS------TPGSGLEGILE-----DLGRRDFTINAL 111
Query: 624 FLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEE 800
L + +GS D G D R + VGD R +ED LR++R FRF + L + E
Sbjct: 112 ALSYPEGSFLDPHGGCNDADARILRAVGDAGRRFREDPLRVLRVFRFVSELGL---DVEP 168
Query: 801 ETLXVLKNNVHGLGNISGERIWGEL 875
T ++ +GL ++GER+ E+
Sbjct: 169 GTCAAARSEANGLAAVAGERVREEV 193
>UniRef50_A6DGQ3 Cluster: RNA-poly(A) polymerase; n=1; Lentisphaera
araneosa HTCC2155|Rep: RNA-poly(A) polymerase -
Lentisphaera araneosa HTCC2155
Length = 412
Score = 85.8 bits (203), Expect = 1e-15
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Frame = +3
Query: 249 PEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFT 428
PEF + + + HE + GGAVRDLL+G PKD D +T+ATPE++ F
Sbjct: 4 PEFNPRLDRGAVQIISRLREAGHETYLVGGAVRDLLVGENPKDFDISTSATPEQVSAFFG 63
Query: 429 AEEVRMIN-----VNGERHGTI--TARINDKENFEVTTLRIDMVTDGRFADVQFTKDW-- 581
+ R+I V+ GT+ A N + + R DG V W
Sbjct: 64 KRKARIIGRRFKIVHVYERGTLYEVATFRRTPNEKERSARPS--DDGEI--VWRDNVWGS 119
Query: 582 -KLDANRRDLTINSMFLG--FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRY 752
+ DANRRD T+N++FL + DY G D++ ++V +GDP +R ED +R++R
Sbjct: 120 PEEDANRRDFTVNALFLDPTDKNKIIDYCGGVADIEDKKVRSLGDPMIRFTEDPVRMLRA 179
Query: 753 FRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ + + ++ E+ + L + +S R++ E+ K
Sbjct: 180 VKLKAQYGFEFEDDVEKAIRELALKI---TLVSQRRLYEEILK 219
>UniRef50_Q9F7R3 Cluster: Predicted poly(A) polymerase; n=1;
uncultured marine gamma proteobacterium EBAC31A08|Rep:
Predicted poly(A) polymerase - Gamma-proteobacterium
EBAC31A08
Length = 410
Score = 85.4 bits (202), Expect = 2e-15
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Frame = +3
Query: 282 IDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG 461
I + + K + + GG VRD L GL PKD D AT ATPE++++ F A R+I G
Sbjct: 12 ISVVQDLQKNNFQAYLVGGCVRDALTGLEPKDFDIATNATPEQIRKTFKAS--RII---G 66
Query: 462 ERHGTITARINDKENFEVTTLRI--------DMVTDGRFADVQFTKDW---KLDANRRDL 608
+R + N E EV T R ++VTD + +W + D +RRD
Sbjct: 67 KRFKLVHV-FNRSELLEVATFRSGSDQEDGENIVTDST-GKILRDNNWGTLEQDCHRRDF 124
Query: 609 TINSM-FLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKP 785
T+N++ + + D+ G + + K+ + +GDP R +ED +R +R RF ++ K
Sbjct: 125 TVNALYYCPVTKKIEDHNDGLKHIHKKVIVSIGDPQRRFEEDPVRSLRAIRFSNKLNFKI 184
Query: 786 DNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
DN ++ + + H L IS R++ E K
Sbjct: 185 DNLVKDAIY---DKGHLLSGISNARLFDEFCK 213
>UniRef50_Q8RJX5 Cluster: Polynucleotide adenyltransferase; n=4;
Cystobacterineae|Rep: Polynucleotide adenyltransferase -
Stigmatella aurantiaca
Length = 423
Score = 85.4 bits (202), Expect = 2e-15
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Frame = +3
Query: 279 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 458
++D+ + + + + GG VRD+L G+ PKD D A++A P+E++ F + +
Sbjct: 15 ILDVLQRLRELGFAVFLVGGCVRDILRGVAPKDFDVASSALPQEVQGAF-----KKVIPT 69
Query: 459 GERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLTINSM-FL 629
G +HGT+T I + EVTT R D + R + V F +D D +RRD TIN+M +
Sbjct: 70 GIQHGTVTVVIGG-NHVEVTTFRSEGDYLDGRRPSSVTFERDITQDLSRRDFTINAMAYD 128
Query: 630 GFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRF 761
+ D F G DL R + V P R ED LR +R RF
Sbjct: 129 PLGRELVDPFGGMTDLHARLIRCVRSPIERFSEDGLRPLRAVRF 172
>UniRef50_A6P236 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 438
Score = 85.4 bits (202), Expect = 2e-15
Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGL-TPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
E + GGAVRD +MG KD D AT+A P+++K +F+ +I G +HGT+T +
Sbjct: 20 EAFLVGGAVRDYVMGKRAAKDWDIATSALPQQVKAVFSG--YHLIET-GLKHGTVTVVV- 75
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYED 674
D + E+TT R D + + D RRD T+N++ V D G D
Sbjct: 76 DHQPIEITTYRTDSGCP--------SPSLRADLERRDFTMNALAYNPRTGVVDLVGGAGD 127
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISG 854
++K V GDPD R +ED LRI+R RF ++ D T ++ N L ++
Sbjct: 128 IEKGIVRCTGDPDRRFREDGLRILRALRFASVYGMEID---AATADAIRRNQSLLRGVAV 184
Query: 855 ERIWGEL 875
ERI EL
Sbjct: 185 ERIQVEL 191
>UniRef50_Q6F852 Cluster: Poly(A) polymerase I; n=2;
Acinetobacter|Rep: Poly(A) polymerase I - Acinetobacter
sp. (strain ADP1)
Length = 485
Score = 85.0 bits (201), Expect = 2e-15
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Frame = +3
Query: 279 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 458
++D+ +K +E I GG VRDL++GL PKD D T ATP ++KE+F R+I
Sbjct: 20 ILDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVF-GRRCRIIG-- 76
Query: 459 GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKD--W---KLDANRRDLTINSM 623
R + + +E EV T R A +D W + D RRD +IN++
Sbjct: 77 --RRFELAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTL 134
Query: 624 FL-GFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEE 800
+ G V D+ D++KR + +GDP R +ED +R++R RF ++ D
Sbjct: 135 YYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEIL 194
Query: 801 ETLXVLKNNVHGLGNISGERIWGELKK 881
+ V + L ++S R++ E +K
Sbjct: 195 KIFDVEMTQL--LRDVSPHRLYDESQK 219
>UniRef50_Q39ZX1 Cluster: Poly(A) polymerase; n=2;
Desulfuromonadales|Rep: Poly(A) polymerase - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 442
Score = 85.0 bits (201), Expect = 2e-15
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Frame = +3
Query: 288 LKKIFDKYKHEIR--IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG 461
LK ++ H + + GG VRDLL+ PKD D AT ATP ++K++F R + G
Sbjct: 45 LKVLYRLRNHGFKAYLVGGGVRDLLLNRRPKDFDVATDATPSQVKKLF-----RNCFLVG 99
Query: 462 ERHGTITARINDKENFEVTTLRI----DMVTDGRFADVQFTKDW----KLDANRRDLTIN 617
R R + EV T R + + D FT++ + DA RRD +IN
Sbjct: 100 RRFRLAHIRFAENYVVEVATFRRQPRPEELPDDPAEHFFFTENVFGTPREDAFRRDFSIN 159
Query: 618 SMFLGFDG-SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNH 794
+F D SV D+ G +DL+ RR+ +GDP VR ED +R++R F R+ D
Sbjct: 160 GLFYNIDDFSVIDHVGGLQDLEARRLRVIGDPLVRFTEDPVRMLRALEFAARLGFSLDEG 219
Query: 795 EEETL 809
E +
Sbjct: 220 IREAI 224
>UniRef50_A6W2I1 Cluster: Poly(A) polymerase; n=4;
Oceanospirillales|Rep: Poly(A) polymerase - Marinomonas
sp. MWYL1
Length = 484
Score = 85.0 bits (201), Expect = 2e-15
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 18/242 (7%)
Frame = +3
Query: 210 KCRENPIVI-KVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDF 386
K + PI+I + D + + + + +K + + GG VRD L+G+ PKD D
Sbjct: 20 KAQTYPIIISRSDHSLSRQDLSPNAVKVLYRLNKAGFDAFLVGGCVRDHLIGIKPKDFDV 79
Query: 387 ATTATPEEMKEMFTAEEV-----RMINVNGERH--GTITARIN----DKENFEVTTLRID 533
T ATPEE+ +F+ + ++++V R T R N D ++ + +
Sbjct: 80 VTNATPEEVHTIFSNSRLIGRRFKLVHVTFGREIIEVSTFRANSAQDDSDDDDTQNSSLK 139
Query: 534 MVTDGRFADVQFTKD-----WKLDANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVA 695
R A +D + DA RRD T N+++ D S++DY G +D++ +++
Sbjct: 140 GKDSARSAHGIVLRDNVYGNIEEDAERRDFTFNALYYNVKDFSIHDYCGGLKDIENKQIR 199
Query: 696 FVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGEL 875
+GD R +ED +R++R RF G++ + E ET +K H L +I R++ E+
Sbjct: 200 IIGDARQRYQEDPVRMLRAIRFAGKLGFE---LEAETAAPIKEMAHLLDHIPPARLFEEV 256
Query: 876 KK 881
K
Sbjct: 257 LK 258
>UniRef50_Q31FF3 Cluster: Poly(A) polymerase; n=1; Thiomicrospira
crunogena XCL-2|Rep: Poly(A) polymerase - Thiomicrospira
crunogena (strain XCL-2)
Length = 484
Score = 84.6 bits (200), Expect = 3e-15
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE------ 434
+E +D+ + ++ + GG VRD+L+GL PKD D T A PE++K +F +
Sbjct: 46 KEALDVLYGLKRAGYDAYLVGGGVRDILLGLEPKDFDVVTNAEPEQIKGVFKSRCRLIGR 105
Query: 435 EVRMINVNGERHGTITARINDKENFEVTTLR-------IDMVTD-GRFADVQFTKDWKLD 590
R+ +V R+ A + + + R V D GR + D
Sbjct: 106 RFRLAHVYFGRNVVEVATFRGDGDGQKSAGRSRKQVNHTRAVDDTGRLVRDNVYGSIEED 165
Query: 591 ANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYG 767
RRD TINS++ D SV DY G ED++K ++ +GDP++R +ED +R++R RF
Sbjct: 166 VWRRDFTINSLYYNIRDFSVLDYTGGMEDIEKGQLRLIGDPEMRYREDPVRMIRAIRFAA 225
Query: 768 RIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
++ + E T + H L ++S R++ E+ K
Sbjct: 226 KLGFE---IEPNTKAPIYELAHLLKDVSHARMFEEVLK 260
>UniRef50_A5WHD2 Cluster: Poly(A) polymerase; n=3;
Psychrobacter|Rep: Poly(A) polymerase - Psychrobacter
sp. PRwf-1
Length = 719
Score = 84.6 bits (200), Expect = 3e-15
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 7/215 (3%)
Frame = +3
Query: 258 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 437
K+ +I++ +K + I GG VRD L+GL+PKD D T A P E+K++F +
Sbjct: 13 KADLPNSIIEVIATLNKGGFDAYIVGGGVRDTLLGLSPKDFDAVTDARPHEVKDLF-GKR 71
Query: 438 VRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGR-FADVQFTKD--W---KLDANR 599
R+I R + + ++ EV T R D +D +D W + D R
Sbjct: 72 CRIIG----RRFQLAHVYSGRDMIEVATFRAPPTGDAHATSDGMIVRDNVWGDIEQDFAR 127
Query: 600 RDLTINSMFL-GFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIA 776
RD +IN+M+ G V+D+ +D++ + + +G +R++ED +R++R RF ++
Sbjct: 128 RDFSINAMYYQPLKGVVHDFCNALDDIKNKTLRLLGHAPLRIEEDPVRLLRALRFKAKLG 187
Query: 777 LKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ D EE + +N L +S R++ E +K
Sbjct: 188 FEFD--EELSNQFHDDNWALLDQVSPHRLYDESQK 220
>UniRef50_Q8ZRQ8 Cluster: Poly(A) polymerase; n=89;
Proteobacteria|Rep: Poly(A) polymerase - Salmonella
typhimurium
Length = 465
Score = 83.8 bits (198), Expect = 5e-15
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Frame = +3
Query: 270 TEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMI 449
+E + + +K +E + GG VRDLL+G PKD D T ATP++++++F R++
Sbjct: 45 SENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLF--RNCRLV 102
Query: 450 NVNGERHGTITARINDKENFEVTTLR-------IDMVTDGRFADVQFTKD-----WKLDA 593
R + + E EV T R D T R + +D + DA
Sbjct: 103 G----RRFRLAHVMFGPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDA 158
Query: 594 NRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGR 770
RRD TINS++ D +V DY G +DLQ+ + +G+P+ R +ED +R++R RF +
Sbjct: 159 QRRDFTINSLYYSVADFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAAK 218
Query: 771 I--ALKPDNHEE-ETLXVLKNNV 830
+ + P+ E L L N++
Sbjct: 219 LNMHISPETAEPIPRLATLLNDI 241
>UniRef50_Q83EM9 Cluster: PolyA polymerase; n=3; Coxiella
burnetii|Rep: PolyA polymerase - Coxiella burnetii
Length = 439
Score = 82.6 bits (195), Expect = 1e-14
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Frame = +3
Query: 216 RENPIVIKVDSPEF-KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFAT 392
++ P VIK + +S + + + K +E + GG VRD+L+ PKD D AT
Sbjct: 20 KDRPRVIKRKNHSISRSDISPNALRVLYRLSKSGYEAYLVGGGVRDMLLSYHPKDFDIAT 79
Query: 393 TATPEEMKEMF-----TAEEVRMINV--NGERHGTITARINDKENFEVTTLRIDMVTDGR 551
A P E++++F R+++V E T R N +E + L T
Sbjct: 80 NARPHEIRKLFKNSRLIGRRFRLVHVYFPNEIIEVSTFRANAEELLKEEPLSEMQKTGAT 139
Query: 552 FADVQFTKDW-KLDANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVK 725
T + DA RRD T+N+++ D SV D+ G DL +R + +GDP R
Sbjct: 140 MLSEDNTYGTIEEDAWRRDFTVNALYYNITDFSVIDFTGGMRDLHQRLIRMIGDPTQRYH 199
Query: 726 EDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
ED +R++R R ++ K EE L L N L ++ R++ E+ K
Sbjct: 200 EDPVRLLRAIRLAAKLDFKIHPDTEEPLKKLHNL---LRHVPSARLFTEVLK 248
>UniRef50_P44439 Cluster: Probable poly(A) polymerase; n=24;
Gammaproteobacteria|Rep: Probable poly(A) polymerase -
Haemophilus influenzae
Length = 452
Score = 82.6 bits (195), Expect = 1e-14
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Frame = +3
Query: 267 FTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE---- 434
F+ +++ + + E I GG +RDLL+G PKD D AT A PE+++ +F +
Sbjct: 32 FSRNALNVVEKLQRQGFEAYIVGGCIRDLLLGKKPKDFDVATNARPEQIQNIFQRQCRLV 91
Query: 435 --EVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDL 608
R+ ++ R A + + +G + DA RRD
Sbjct: 92 GRRFRLAHIMFGRDIIEVATFRANHSDARNENQAKQSNEGMLLRDNVYGTIEQDAARRDF 151
Query: 609 TINSMFLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIAL-- 779
T+N+++ D ++ DYF G +DL+ ++ +GDP R +ED +R++R RF ++ +
Sbjct: 152 TVNALYYNPQDNTLRDYFEGIKDLKAGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLDMFL 211
Query: 780 -KPDNHEEETLXVLKNNV 830
KP L L N+
Sbjct: 212 EKPSEQPIRELAPLLKNI 229
>UniRef50_Q057U5 Cluster: Poly(A) polymerase I; n=1; Buchnera
aphidicola str. Cc (Cinara cedri)|Rep: Poly(A)
polymerase I - Buchnera aphidicola subsp. Cinara cedri
Length = 407
Score = 82.2 bits (194), Expect = 2e-14
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 15/189 (7%)
Frame = +3
Query: 303 DKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT 482
+K +E + GG VRDLL+G PKD D AT A P+E++++F + R+I R I
Sbjct: 28 NKLGYEAYLVGGGVRDLLLGKKPKDFDIATNAKPDEIRKLF--KNCRLIG----RRFIIA 81
Query: 483 ARINDKENFEVTTLRID---MVTDGRFADVQFTKDWKL-----------DANRRDLTINS 620
I E EV+T R + + + TK L DA RRD+TIN+
Sbjct: 82 HLIFKNEIIEVSTFRAKNNHLKKNNLYYKKIKTKKGILLSDNTFGKIEEDAYRRDITINA 141
Query: 621 MFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHE 797
++ D + DY G +D++ +++ +G+ + R +ED +R++R RF ++ + D
Sbjct: 142 LYYSIKDFGIRDYIGGIKDIKLKKIRLIGNAETRYREDPVRMLRVIRFSVQLNMHIDKKT 201
Query: 798 EETLXVLKN 824
E+ + L N
Sbjct: 202 EKPIIKLSN 210
>UniRef50_Q605H2 Cluster: PolyA polymerase; n=2;
Gammaproteobacteria|Rep: PolyA polymerase -
Methylococcus capsulatus
Length = 438
Score = 80.2 bits (189), Expect = 6e-14
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Frame = +3
Query: 258 KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEE 437
+++ ++ + + K ++ + GG VRDLL+G PKD D T A PEE+K +F
Sbjct: 56 RALISDNALKVLYRLRKAGYQAYLVGGCVRDLLLGREPKDFDVVTDAHPEEIKAVF--RN 113
Query: 438 VRMINVNGERHGTITARINDKENFEVTTLRI-------DMVTD-GRFADVQFTKDWKLDA 593
R+I G R + E EV T R + VT+ GR + DA
Sbjct: 114 CRLI---GRRFRLAHVHFGE-EIIEVATFRALTREPHDEHVTEGGRILRDNVYGTIEEDA 169
Query: 594 NRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRF 761
RRD T+N+++ D SV DY G +D + + +GDP+ R +ED +R++R RF
Sbjct: 170 FRRDFTVNALYYNISDFSVIDYVGGMDDHRNASLRLIGDPEQRYREDPVRMLRAIRF 226
>UniRef50_Q2LST9 Cluster: Poly A polymerase; n=1; Syntrophus
aciditrophicus SB|Rep: Poly A polymerase - Syntrophus
aciditrophicus (strain SB)
Length = 495
Score = 78.2 bits (184), Expect = 3e-13
Identities = 64/190 (33%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
HE GG VRD L G+ D D T+A+PE ++ +F R + V G R G + I
Sbjct: 83 HEAWFVGGCVRDYLRGVEAGDYDIVTSASPEAIQALFP----RTVGV-GIRFGILIV-IE 136
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD-GSVYDYFYGYE 671
+ + EV T R + G + + D RRD TIN+M D G + D G
Sbjct: 137 NGYSHEVATYR----SPGGYLE---------DVLRRDFTINAMLQDPDTGRIIDEVGGRA 183
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
DL+ R + VG PD R ED LR++R RF +A + E+ETL ++ + + +S
Sbjct: 184 DLEGRVIRAVGRPDERFAEDRLRMLRAVRFAANLAF---SVEQETLEAIQAHAPEIQEVS 240
Query: 852 GERIWGELKK 881
ER+ EL +
Sbjct: 241 VERVADELTR 250
>UniRef50_Q2J4B5 Cluster: Metal dependent phosphohydrolase; n=40;
Actinobacteria (class)|Rep: Metal dependent
phosphohydrolase - Frankia sp. (strain CcI3)
Length = 502
Score = 77.8 bits (183), Expect = 3e-13
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 10/209 (4%)
Frame = +3
Query: 285 DLKKIFDKYKHEIRIAGGAVRDLLMG--------LTPKDLDFATTATPEEMKEMFTAEEV 440
+L ++F + + + GG+VRD L+G P DLDFAT A PE + E+ T
Sbjct: 27 ELGRVFTANGYLLHLVGGSVRDALLGRPASAVSGAVPADLDFATDARPERVLEI-TRGWA 85
Query: 441 RMINVNGERHGTITARINDKENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTIN 617
G GT+ FE+TT R + R V + + D +RRD T+N
Sbjct: 86 EATWEAGIAFGTV-GLARHGVRFEITTYRSEAYDRKSRNPAVTYGDSLEADLSRRDFTVN 144
Query: 618 SMFLGFDGSVY-DYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNH 794
+M + G + D F G DL + + P+ +D LRI+R RF + L P
Sbjct: 145 AMAVSVPGHDFVDLFGGMADLARGVLRTPASPEASFDDDPLRILRAARFEAALGLTP--- 201
Query: 795 EEETLXVLKNNVHGLGNISGERIWGELKK 881
E + +++ L +S ERI EL+K
Sbjct: 202 VPELVAAMRSRADRLAVVSPERIRDELRK 230
>UniRef50_Q4JSD7 Cluster: TRNA nucleotidyltransferase; n=1;
Corynebacterium jeikeium K411|Rep: TRNA
nucleotidyltransferase - Corynebacterium jeikeium
(strain K411)
Length = 547
Score = 77.4 bits (182), Expect = 5e-13
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Frame = +3
Query: 276 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 455
+++ L + F H + + GG+VRD L+G DLDF T A P+ + ++ T +
Sbjct: 64 DLLPLTQAFQDAGHSLYLVGGSVRDALLGRLSHDLDFTTDARPQAIVDIVT-PLAETVWD 122
Query: 456 NGERHGTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMFLG 632
G +GT++A + + E+TT R D R +V F D RRD N++ L
Sbjct: 123 TGIEYGTVSALVKG-QILEITTFRADQYDGQSRNPEVSFGDSLDGDLIRRDFRANAIALE 181
Query: 633 F--DGS--VYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEE 800
DG+ + D G EDLQ + P++ +D LR++R RF ++ +
Sbjct: 182 LSPDGNHQLRDPLGGLEDLQAGVLDTPDSPEISFNDDPLRMLRACRFVSQLEFGVTKRVK 241
Query: 801 ETLXVLKNNVHGLGNISGERIWGELKK 881
E + + + I+ ER+ EL K
Sbjct: 242 EAMAAMSEQI---SRITVERVAVELNK 265
>UniRef50_A6PUV6 Cluster: Poly(A) polymerase precursor; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Poly(A)
polymerase precursor - Victivallis vadensis ATCC BAA-548
Length = 412
Score = 77.4 bits (182), Expect = 5e-13
Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Frame = +3
Query: 279 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 458
VI L E I GGA+RDLL+G TPKD D +T+ATPEE++ +F R+I
Sbjct: 11 VISLISELQNAGFEAYIVGGAIRDLLLGRTPKDYDISTSATPEEVRGVFGRRIARII--- 67
Query: 459 GERHGTITARINDKENFEVTTLRI-----DMVTDGR----------FADVQFTKDWKLDA 593
G+R + + E FEV+T R + DGR +D +F + DA
Sbjct: 68 GKRFRLVHVQYGG-ELFEVSTFRKAPTQGQLRPDGRPAKDLPEHMILSDNEFGSA-EEDA 125
Query: 594 NRRDLTINSMFLG-FDGSVYDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYG 767
RRD T+N++F + DY G D++ V +G+P +R +ED +R++R + G
Sbjct: 126 WRRDFTVNALFYDPVRSELIDYTGQGIGDIRAGIVRAIGNPKLRFEEDPVRMLRALKLVG 185
Query: 768 RIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ D E L N++ + + + R+ EL+K
Sbjct: 186 QYDFALDCATENALF---NSLELIRHAAPSRLSLELEK 220
>UniRef50_Q19Y52 Cluster: Gp8; n=1; Mycobacterium phage Wildcat|Rep:
Gp8 - Mycobacterium phage Wildcat
Length = 401
Score = 76.2 bits (179), Expect = 1e-12
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Frame = +3
Query: 276 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 455
E+ +L K+F H+I + GG VRD+L+G +D+D AT A PE ++ +
Sbjct: 6 ELCELAKLFAP--HKIYLVGGTVRDMLLGRESQDIDIATDAPPEVSSDILRKWGEEFWD- 62
Query: 456 NGERHGTITARINDKENFEVTTLRI--DMVTDGRFADVQFTKDWKLDANRRDLTINSMFL 629
G R GT+ A+ D E +VTT R D R VQ+ + D RRD TIN++
Sbjct: 63 PGVRFGTVCAKKGDME-VQVTTFRAAEDYTQGDRHPKVQWGSHIENDLLRRDFTINAIAQ 121
Query: 630 GFDGSVYDYFYG----YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPD-NH 794
D + + G + D+ +R + +P +D LR++R RF ++ PD +
Sbjct: 122 HIDPDGHVTWTGRAQAFSDINRRILRTPINPIKSFTDDPLRLIRAARFQAQL---PDFSV 178
Query: 795 EEETLXVLKNNVHGLGNISGERIWGELKK 881
ET +++ + N++ ERI EL+K
Sbjct: 179 ATETWEGMESCAPHIRNVASERIVAELEK 207
>UniRef50_Q6MHS6 Cluster: Poly(A) polymerase; n=1; Bdellovibrio
bacteriovorus|Rep: Poly(A) polymerase - Bdellovibrio
bacteriovorus
Length = 409
Score = 75.4 bits (177), Expect = 2e-12
Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E + GG VRDLL+G+ PKD D AT+A P +++ ++V V G R + + D
Sbjct: 40 ETYLVGGCVRDLLVGIHPKDFDIATSAHPNQVR-----KKVPNAYVIGRRFKLVLVKRGD 94
Query: 498 KENFEVTTLRIDMVTDGRFADV--------QFTKDWKLDANRRDLTINSMFLG-FDGSVY 650
++ FEV T R + VT AD + + DA RRD T N++F +
Sbjct: 95 QQ-FEVATFRRN-VTQEELADQGDDSVEGDNYFGTVEEDAVRRDFTCNAVFYDPGQHKLI 152
Query: 651 DYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFR 758
DY G +D++ R + +GDP R ED +RI+R R
Sbjct: 153 DYCGGIQDIENRVLRMIGDPKARFIEDPIRILRAIR 188
>UniRef50_A5EWQ4 Cluster: Poly(A) polymerase PcnB; n=1;
Dichelobacter nodosus VCS1703A|Rep: Poly(A) polymerase
PcnB - Dichelobacter nodosus (strain VCS1703A)
Length = 430
Score = 74.5 bits (175), Expect = 3e-12
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Frame = +3
Query: 261 SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 440
S+F I + + + +E + GG +RD L+ PKD D AT A PEE+ +F
Sbjct: 22 SVFDRRAIAICRQLHEAGYEAYLVGGCLRDTLLQQPPKDFDIATNARPEEIAALF--RNC 79
Query: 441 RMINVNGERHGTITARINDKENFEVTTLR------IDMVTDGRFADVQFTKDWKLDANRR 602
R+I R + ++ EV T R + DG + + D RR
Sbjct: 80 RLIG----RRFRLAHLHYGRDIIEVATFRASADEQVKTDADGHVLEDNHYGTMEEDVLRR 135
Query: 603 DLTINSMFLGFD-GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIAL 779
D INS++ G + DY D++ R++ +G P R ED +R++R RF ++++
Sbjct: 136 DFIINSLYYDVQTGVLIDYLDALADIRARQIRLIGTPSARYIEDPVRMLRAARFAAKLSM 195
Query: 780 KPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ ++ + + + + R++ E++K
Sbjct: 196 PLEAQTQQAIASCRQELRA---VPAARLFDEVQK 226
>UniRef50_Q0AB71 Cluster: Poly(A) polymerase; n=1; Alkalilimnicola
ehrlichei MLHE-1|Rep: Poly(A) polymerase -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 479
Score = 74.1 bits (174), Expect = 4e-12
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 26/247 (10%)
Frame = +3
Query: 219 ENPIVIKVDSPEF-KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATT 395
+NP ++ D ++ +E + + + + GG VRDL +G PKD D AT
Sbjct: 35 DNPAIVPRDQHRISRADISENALKVLYRLKNAGYGAYLVGGGVRDLSLGHEPKDFDVATD 94
Query: 396 ATPEEMKEMFT-----AEEVRMINVNGERHGTITARIN-----------------DKENF 509
A PEE++E+F R+ +V R A D ++
Sbjct: 95 ARPEEVRELFRNCRLIGRRFRLAHVQFGREIIEVATFRALHDPESQDDDEADGDFDDDDV 154
Query: 510 EVTTLRIDMVT--DGRFADVQFTKDWKLDANRRDLTINSMFLGF-DGSVYDYFYGYEDLQ 680
EV + V +GR + DA RRD TIN+++ D SV D+ G +DL
Sbjct: 155 EVRDRAVGEVAFENGRIVRDNVYGTLEEDALRRDFTINALYYNIADFSVVDHAGGLKDLD 214
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
+ + +GDP+ R +ED +R++R RF ++ + +T L H L + R
Sbjct: 215 QGVIRLMGDPETRYREDPVRMLRAVRFAAKLGFR---IHPDTAEPLPRMAHLLAEVPPAR 271
Query: 861 IWGELKK 881
++ E+ K
Sbjct: 272 LFDEVLK 278
>UniRef50_Q44038 Cluster: ORFIII; n=1; Acidaminococcus
fermentans|Rep: ORFIII - Acidaminococcus fermentans
Length = 256
Score = 73.3 bits (172), Expect = 7e-12
Identities = 41/111 (36%), Positives = 63/111 (56%)
Frame = +3
Query: 549 RFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKE 728
R ++V + K + D +RRD TIN++ + +G + D F+G +DL+ R + VGDPD R E
Sbjct: 16 RPSEVWYCKTLEEDLSRRDFTINALAVDQEGHITDCFHGLDDLRGRVLRTVGDPDRRFSE 75
Query: 729 DYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
D LR+ R RF G++ PD L + N+ + +S ER+ EL K
Sbjct: 76 DALRMFRACRFVGQLGFAPD---PAILPAIGRNLQKVPGLSLERVRTELNK 123
>UniRef50_Q73LY6 Cluster: PolyA polymerase family protein; n=1;
Treponema denticola|Rep: PolyA polymerase family protein
- Treponema denticola
Length = 380
Score = 72.5 bits (170), Expect = 1e-11
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 2/204 (0%)
Frame = +3
Query: 276 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 455
E + + + + E I GGAVRDLL+G PKD D AT+A P ++++MF R V
Sbjct: 35 EAVKIIQRLNSQGFEAYIVGGAVRDLLIGHVPKDFDIATSAEPSKIRKMF-----RNSRV 89
Query: 456 NGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLG- 632
G R + +K +EV+T R DG + T D D +RRD T+N+++
Sbjct: 90 IGRRFRLVHIFFGEK-IYEVSTFR--STEDGSIGNKFGTID--EDVHRRDFTLNALYYDP 144
Query: 633 FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLX 812
V DY G +D++ +++ + + ED +R++R ++ A D+ L
Sbjct: 145 IHELVIDYVDGVKDIRAKKIRPIIPLQLIFSEDPVRMIRAIKY----AAMTDSGIPFFLQ 200
Query: 813 V-LKNNVHGLGNISGERIWGELKK 881
+ ++ N H L +S RI E+ K
Sbjct: 201 LQIRKNAHLLEFVSPSRITEEINK 224
>UniRef50_Q6M1D4 Cluster: POLYA POLYMERASE; n=11;
Corynebacterineae|Rep: POLYA POLYMERASE -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 494
Score = 72.5 bits (170), Expect = 1e-11
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Frame = +3
Query: 279 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 458
++ L F H + + GG+VRD +G DLDF T+A PEE K + + ++
Sbjct: 39 LVPLAAAFSSKGHSLYLVGGSVRDAFLGELGHDLDFTTSARPEETKAILD-DYADVVWDT 97
Query: 459 GERHGTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMFLGF 635
G GT++A + ++ E+TT R D+ + R +V F + D RRD +N+M +
Sbjct: 98 GIAFGTLSAEKHGQQ-IEITTFRSDLYDGNSRNPEVTFGDTLEGDLIRRDFKVNAMAVEI 156
Query: 636 --DGSV--YDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
DG + +D G EDL + P+ +D LR++R RF ++
Sbjct: 157 QADGELTFHDPVGGLEDLLTHTLDTPATPEQSFNDDPLRMLRAARFVSQL 206
>UniRef50_Q67QK4 Cluster: Putative RNA nucleotidyltransferase; n=1;
Symbiobacterium thermophilum|Rep: Putative RNA
nucleotidyltransferase - Symbiobacterium thermophilum
Length = 457
Score = 71.7 bits (168), Expect = 2e-11
Identities = 56/158 (35%), Positives = 77/158 (48%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
HE + GGAVRDLL+GL P+D D AT+A P E++ +F E R + E GT+
Sbjct: 41 HEAVVVGGAVRDLLLGLVPQDWDLATSARPAELQALF--PEGRAVGAARET-GTLLIP-G 96
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYED 674
D +E+T R GR D RRD TI++M +G + D G D
Sbjct: 97 DGTTYEITPYRA-----GRLEG---------DLARRDFTIDAMAATPEGRLIDPLGGRRD 142
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPD 788
L V G P+ R+ ED LR++R R + L+ D
Sbjct: 143 LAAGVVRACGRPEDRLAEDPLRMLRAVRLAAQFDLELD 180
>UniRef50_A4M1T5 Cluster: Polynucleotide adenylyltransferase region;
n=4; Desulfuromonadales|Rep: Polynucleotide
adenylyltransferase region - Geobacter bemidjiensis Bem
Length = 924
Score = 70.9 bits (166), Expect = 4e-11
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 7/236 (2%)
Frame = +3
Query: 189 SKMDLNLKCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLT 368
S+ L +K RE ++ P+ ++ DL ++ D+ + GG VRDLL+ +
Sbjct: 485 SRDALQVKSREVEALMNKHLPQRTTVILH---DLGRVGDQLDLTVYAVGGFVRDLLLDIQ 541
Query: 369 PKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRID-MVTD 545
D+D E F ++ + + ++ GT D +V + R++ V+
Sbjct: 542 NMDIDVTVDGDGILFAETFASQFGCRVK-SHQKFGTAVIVFPDGFKIDVASTRLEYYVSP 600
Query: 546 GRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY----DYFYGYEDLQKRRVAFVGDPD 713
G V+ K+D RRD T+N++ + +G + DYF Y DLQ R + + +
Sbjct: 601 GALPTVE-RSSLKMDLYRRDFTVNTLAIALNGDSFGKLIDYFGAYRDLQSRVIRVL--HN 657
Query: 714 VRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNV--HGLGNISGERIWGEL 875
+ ED R+ R RF R+ K H E+ ++KN V L + G R+ EL
Sbjct: 658 LSFVEDPTRVFRAIRFEQRLNFKIAKHTED---LIKNAVKMEFLEKLGGRRLLAEL 710
>UniRef50_A5UUL6 Cluster: Polynucleotide adenylyltransferase/metal
dependent phosphohydrolase; n=2; Roseiflexus|Rep:
Polynucleotide adenylyltransferase/metal dependent
phosphohydrolase - Roseiflexus sp. RS-1
Length = 459
Score = 70.5 bits (165), Expect = 5e-11
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GGAVRDLL+GLTP D+D + A R +NV G G + R+++ E
Sbjct: 29 LVGGAVRDLLLGLTPTDIDIEVYGVDGQTLAAALAPFGR-VNVVGRSFGVLKMRLDEYEV 87
Query: 507 FEVTTLRIDMVTD---GRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
R + D G D + + RRD TIN++ L G + DYF G DL
Sbjct: 88 DVALPSRRHPLPDEETGALPDYDPSLTPREALARRDFTINALALTPSGDLIDYFGGRADL 147
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
+ R + + +D LR++R +F R A++ ET + + + + +
Sbjct: 148 EARVLRHTSE---AFGDDPLRVLRAMQFAARFAMR---LAPETAALCRTLLSQAAGLPPD 201
Query: 858 RIWGELKKF 884
RIW E +K+
Sbjct: 202 RIWREWQKW 210
>UniRef50_Q5WGA1 Cluster: CCA-adding enzyme; n=1; Bacillus clausii
KSM-K16|Rep: CCA-adding enzyme - Bacillus clausii
(strain KSM-K16)
Length = 376
Score = 70.1 bits (164), Expect = 7e-11
Identities = 58/188 (30%), Positives = 92/188 (48%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E I GGAVRD L+G D+D AT A+P ++ ++FT + +++N E H T+ +
Sbjct: 20 EAYIVGGAVRDYLLGKDVDDVDIATQASPHQVADIFT----KGVHINQE-HKTVLIP-GE 73
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
K E+TT + + + + D +RD TIN++ + V D + G +DL
Sbjct: 74 KGPIEITTYKGETLAE--------------DLQKRDFTINALAMTETREVIDPYGGRQDL 119
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
QKR + D R+ ED LR++R RF + + D + V K L + E
Sbjct: 120 QKRLLRSY-DAQKRLSEDPLRMLRAARFISSLGFEADRQLVKETTVQK---AALQRCARE 175
Query: 858 RIWGELKK 881
R+ EL+K
Sbjct: 176 RVVVELEK 183
>UniRef50_Q9CP21 Cluster: Multifunctional CCA protein [Includes:
CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)]; n=50; Gammaproteobacteria|Rep:
Multifunctional CCA protein [Includes: CCA-adding enzyme
(EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)] - Pasteurella multocida
Length = 420
Score = 68.9 bits (161), Expect = 2e-10
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+I + GGAVRD L+ L KD D+ ATP+++ ++ + + + +
Sbjct: 2 KIYLVGGAVRDQLLNLVVKDRDWVVVGATPDDL----LSQGYQQVG----KDFPVFLHPQ 53
Query: 495 DKENFEV--TTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGY 668
KE + + T + G D T + D +RRDLTIN++ DG +YD++ G
Sbjct: 54 TKEEYALARTERKAGSGYTGFICDFSPTISLEQDLSRRDLTINALAQDLDGKIYDFYGGL 113
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK--NNVHGLG 842
DL++R + V ED LR++R RF R ET +++ + L
Sbjct: 114 TDLKQRLLRHVSP---AFAEDPLRVLRVARFAARYHALGFTIASETRELMQQLSQSGELS 170
Query: 843 NISGERIWGELKK 881
N++ ER+W E +K
Sbjct: 171 NLTAERVWLETEK 183
>UniRef50_Q9KC89 Cluster: CCA-adding enzyme; n=1; Bacillus
halodurans|Rep: CCA-adding enzyme - Bacillus halodurans
Length = 375
Score = 68.9 bits (161), Expect = 2e-10
Identities = 58/186 (31%), Positives = 88/186 (47%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E I GGAVRD +G PKD+D T+A+PEE++ ++ +N + T+T +
Sbjct: 21 EAYIVGGAVRDYHIGRKPKDVDVVTSASPEEIRTLYP----HAFQIN-RQFQTLTVHL-Q 74
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
K EV+TLR + D D RD TIN+M L +G + D G DL
Sbjct: 75 KVAIEVSTLRGGSIED--------------DLCSRDFTINAMALAMNGDIIDPTGGKTDL 120
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
+ + P+ R KED LR++R RF + + T +K + L +++ E
Sbjct: 121 ENGVIRSF-HPEARFKEDPLRMLRAPRFASELGF---TVAKGTAEAIKGSCSLLADVAVE 176
Query: 858 RIWGEL 875
R+ EL
Sbjct: 177 RVEKEL 182
>UniRef50_Q7XV96 Cluster: OSJNBb0039F02.3 protein; n=3; Oryza
sativa|Rep: OSJNBb0039F02.3 protein - Oryza sativa
subsp. japonica (Rice)
Length = 542
Score = 68.1 bits (159), Expect = 3e-10
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+++ + GG VRDL+M TPKD D TTA ++K+ F+ V + H I
Sbjct: 108 YDVYLVGGCVRDLIMKKTPKDFDIITTADLRQVKDTFSGSAVIVGRRFPICHVYENNSIV 167
Query: 495 DKENFEV-----TTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINS-MFLGFDGSVYDY 656
+ +F T+ +I + + + WK + RD TIN MF + +YDY
Sbjct: 168 EVSSFNTYARGSTSNQIYTSKSPHCSKNDYIR-WK-NCQGRDFTINGLMFNPYAEKIYDY 225
Query: 657 FYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG 836
F G ED++K +V V +ED RI+R R R+ N +ET ++
Sbjct: 226 FGGIEDIKKAKVRTVIPAGTSFQEDCARILRAIRIAARLGF---NFPKETAYYVRTLACS 282
Query: 837 LGNISGERIWGEL 875
+ + RI E+
Sbjct: 283 VARLDKGRILMEI 295
>UniRef50_A7HLG0 Cluster: Polynucleotide adenylyltransferase region;
n=2; Thermotogaceae|Rep: Polynucleotide
adenylyltransferase region - Fervidobacterium nodosum
Rt17-B1
Length = 883
Score = 67.7 bits (158), Expect = 4e-10
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDK 500
+ + GG VRDL++ + D+D E + + A+++ I V E+ T D
Sbjct: 485 VYVVGGFVRDLILNIENYDIDIVVEGNGIEFAK-YMAQQLNAIVVPYEKFFTANVIFKDG 543
Query: 501 ENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYG 665
+V T R + + G V + K D RRD TIN+M + + G++YD+F
Sbjct: 544 FKIDVATARTEYYESPGELPQVDISTI-KKDLYRRDFTINAMAIKLNPQDFGTLYDFFNC 602
Query: 666 YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNV--HGL 839
+DL++ + + ++ ED R++R RF R K +N+ TL +LK N+ L
Sbjct: 603 QKDLEEGVIRVL--HNLSFVEDPTRMIRAVRFEQRYGFKMENY---TLDLLKKNLSERYL 657
Query: 840 GNISGERIWGELKK 881
+SG RI E++K
Sbjct: 658 ERVSGSRIRQEIEK 671
>UniRef50_A6TR64 Cluster: Polynucleotide adenylyltransferase region
precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Polynucleotide adenylyltransferase region precursor -
Alkaliphilus metalliredigens QYMF
Length = 875
Score = 67.7 bits (158), Expect = 4e-10
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Frame = +3
Query: 303 DKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT 482
D +++ I GG VRD L+G +DLDF + + ++ E+ GT T
Sbjct: 469 DTMGNDVFIVGGFVRDFLLGEENQDLDFVVEGDGIAFAQALNEIIQGRLTIH-EKFGTAT 527
Query: 483 ARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSV 647
++ DK +V T R + V+ + W D RRD TIN+M + + G +
Sbjct: 528 IQLPDKRTLDVVTARREYYEYPAAMPQVEKSSIWS-DLFRRDFTINAMAIQLNKSKFGQL 586
Query: 648 YDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNN 827
DYF G +DL+ + + + ++ ED RI R RF R+ N E+ET +
Sbjct: 587 IDYFGGIQDLEDKNIRVL--YNLSFVEDPTRIFRAIRFSTRLNF---NIEDETKTFIHEA 641
Query: 828 VHG--LGNISGERIWGEL 875
+ L +S ER+ E+
Sbjct: 642 IKDGMLDRLSAERLREEI 659
>UniRef50_A0RPP8 Cluster: PolyA polymerase family protein; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: PolyA
polymerase family protein - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 368
Score = 67.3 bits (157), Expect = 5e-10
Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Frame = +3
Query: 276 EVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 455
E+ LK I + GG VRD+L+G K++DF E++ + + N+
Sbjct: 15 ELSTLKNILKHRTKRAYLVGGCVRDMLLG--AKNIDFDI--------EVYDIDPFKFENI 64
Query: 456 NGERHGTITAR---INDKENFEVTTLRIDMVTD-GRFA-DVQFTKDWKLDANRRDLTINS 620
+ T + + +N++++ R + G A V + D K+ + RRD T+N+
Sbjct: 65 MHDIGATGVGKSYFVYKYKNYDISLPRTESKNGIGHKAFIVSYCNDEKIASKRRDFTMNA 124
Query: 621 MFLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHE 797
M + F+G + D++ G +D+Q + + V ED LR++R +F R LK D
Sbjct: 125 MMINIFNGEILDFWGGRKDIQNKILKIVDKHS--FCEDSLRVLRAVQFAARFGLKAD--- 179
Query: 798 EETLXVLKNNVHGLGNISGERIWGELKKF 884
E++L +++N + ++S +RI EL+KF
Sbjct: 180 EQSLKIMRN--ISIDDLSKDRIRSELEKF 206
>UniRef50_Q74CU0 Cluster: PolyA polymerase family protein; n=5;
Desulfuromonadales|Rep: PolyA polymerase family protein -
Geobacter sulfurreducens
Length = 880
Score = 66.5 bits (155), Expect = 9e-10
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Frame = +3
Query: 285 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGE 464
DL K+ D+ + + GG VRDLL+G D+D + E A V +
Sbjct: 470 DLGKVGDELELPVYAVGGFVRDLLLGAENDDIDVSVEGDGILFAET-VANRVGCRVKSHA 528
Query: 465 RHGTITARINDKENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTINSMFL---- 629
+ GT D +V + R++ T G V+ K+D RRD TIN++ +
Sbjct: 529 KFGTAVIVFPDGLKVDVASTRLEYYETPGALPTVE-RSSLKMDLYRRDFTINTLAVKLNA 587
Query: 630 -GFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEET 806
GF G++ DYF Y DLQ++ + + ++ ED R+ R RF R+ H E
Sbjct: 588 EGF-GTLIDYFGAYRDLQEKTIRVL--HNLSFVEDPTRVFRAIRFEQRLGFPISRHTEN- 643
Query: 807 LXVLKNNVH--GLGNISGERIWGEL 875
++KN V L + G R+ EL
Sbjct: 644 --LIKNAVKMGFLDKLGGRRLLNEL 666
>UniRef50_Q8A6B0 Cluster: TRNA nucleotidyltransferase; n=10;
Bacteroidetes|Rep: TRNA nucleotidyltransferase -
Bacteroides thetaiotaomicron
Length = 502
Score = 66.1 bits (154), Expect = 1e-09
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 6/223 (2%)
Frame = +3
Query: 231 VIKVDSPEFKSIFTEEVID-LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPE 407
+I++ E K F+E + + + D E + GG VRD+ + KD+D +
Sbjct: 26 MIELTQEELKQYFSEPIFGHIAETADALGLECYVVGGYVRDIFLQRPSKDIDVVVVGSGI 85
Query: 408 EMKEMFTAEEVRMINVN-GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWK 584
M E R V+ + GT + E V + D R V+ +
Sbjct: 86 AMAEALGKRLGRGAYVSVFKNFGTAQVKYKGTEVEFVGARKESYQRDSRKPIVE-DGTLE 144
Query: 585 LDANRRDLTINSMFLGFD----GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRY 752
D NRRD TIN+M + + G + D F G D++++ + DPD+ +D LR+MR
Sbjct: 145 DDQNRRDFTINAMAVCLNKARFGELVDPFGGMADMKEKTIRTPLDPDITFSDDPLRMMRC 204
Query: 753 FRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
RF ++ D ++T L N + IS ERI EL K
Sbjct: 205 IRFATQLNFYID---DDTFESLCRNKDRIEIISRERIADELNK 244
>UniRef50_Q8SS78 Cluster: TRNA ADENILYL TRANSFERASE; n=1;
Encephalitozoon cuniculi|Rep: TRNA ADENILYL TRANSFERASE
- Encephalitozoon cuniculi
Length = 464
Score = 66.1 bits (154), Expect = 1e-09
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLD----------FATTATPEEMKEMFTAEEVRMINVNGERH- 470
R+AGG VRD +MG D+D FA + T V N +H
Sbjct: 31 RVAGGWVRDKIMGNPSFDMDIALENISGYKFAVGLVQSATGQKLTDVHVIKDNPEKSKHL 90
Query: 471 GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLG-FDGSV 647
T RIN + LR + ++ R +V+ + DA RRDLTINS+F F +
Sbjct: 91 ETAVVRINGF-CVDFVNLRNETYSETRIPNVKPGTPQE-DAFRRDLTINSLFYNLFTEEI 148
Query: 648 YDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKN 824
DY G ED+ ++ +A DP + +D LR++R FRF+ ++ D +E L +
Sbjct: 149 EDYTGRGLEDIGRKVLATPLDPRTTLLDDPLRLVRIFRFHSKLGFTIDKKIDEALEDKRV 208
Query: 825 NVHGLGNISGERIWGELKK 881
V +S ERI E+ K
Sbjct: 209 KVALAKKVSNERIHIEIFK 227
>UniRef50_A4J3L2 Cluster: Polynucleotide adenylyltransferase region
precursor; n=2; Peptococcaceae|Rep: Polynucleotide
adenylyltransferase region precursor - Desulfotomaculum
reducens MI-1
Length = 907
Score = 65.7 bits (153), Expect = 1e-09
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Frame = +3
Query: 294 KIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHG 473
++ + +++ GG VRD+L+ + D+D EM + + E+ G
Sbjct: 470 EVAEGLNYQVYAVGGLVRDVLLKVENLDVDLVVEGNGIEMANELAKVIGGRVRPH-EKFG 528
Query: 474 TITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----G 641
T D +V T R++ K D RRD TIN+M + + G
Sbjct: 529 TAEIIFPDGYWVDVVTARVEYYEYPAALPQVEQSSLKHDLYRRDFTINAMAVALNPERFG 588
Query: 642 SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK 821
+ DYF G EDLQ + + ++ ED RI+R RF R + + E +TL ++K
Sbjct: 589 ELVDYFNGREDLQNGAIRVL--HNLSFIEDPTRILRAIRFEQRYDM---DIEPQTLRLIK 643
Query: 822 NNVHG--LGNISGERIWGELK 878
V + +S ER+WGELK
Sbjct: 644 EAVREKVIARLSTERMWGELK 664
>UniRef50_Q10S77 Cluster: PolyA polymerase family protein,
expressed; n=3; Oryza sativa|Rep: PolyA polymerase
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 558
Score = 65.7 bits (153), Expect = 1e-09
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 7/190 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEM------FTAEEVRMINVNGERHGTITAR 488
+ GG VRDLL+ PKD D TTA+ +++K+M + + VN +
Sbjct: 101 LVGGCVRDLLLKRAPKDFDVITTASLQQIKKMVFQRCIIIGKRFPICQVNMYGTKIEVSS 160
Query: 489 INDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLG-FDGSVYDYFYG 665
+ N + I + + D W+ ++ +RD TINS+F F+ +YDY G
Sbjct: 161 FSTNANHVKGSKNIGCSEEFKRYDEGDILLWQ-NSMKRDFTINSLFFNPFNFKIYDYVNG 219
Query: 666 YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGN 845
D+ K +V+ V V KED RI+R R R+ + ET ++ + +
Sbjct: 220 VRDISKNKVSTVIPARVSFKEDPARILRGLRIAARLGFE---FSSETSAAIRELSLSITD 276
Query: 846 ISGERIWGEL 875
I R+ EL
Sbjct: 277 IDKARLMMEL 286
>UniRef50_Q3A9F0 Cluster: PolyA polymerase/tRNA
nucleotidyltransferase family protein; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: PolyA
polymerase/tRNA nucleotidyltransferase family protein -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 441
Score = 64.9 bits (151), Expect = 3e-09
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 512
GG+VRD+L+ KD+D AT P E+ E + N + + R+ K+ E
Sbjct: 20 GGSVRDMLLSRPVKDVDLATFQKPREVGEKLL--KAFGGNFFPLKEELLIYRLVFKDGGE 77
Query: 513 VTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGS----VYDYFYGYEDLQ 680
T ++D++ F + + D RRD T+N++ L +G V D F G DLQ
Sbjct: 78 --TYQVDILP-------VFGESLEEDLRRRDFTVNALALPVNGEFPREVIDLFGGRNDLQ 128
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
R + + ++ ED +RI+R R G + E+ET+ V K + + + GER
Sbjct: 129 ARIIRMISAENIL--EDPVRILRGIRLAGELGFAV---EQETMVVFKQYIQYIKKMPGER 183
Query: 861 IWGELKK 881
+ ELKK
Sbjct: 184 VAEELKK 190
>UniRef50_Q0AVZ3 Cluster: TRNA nucleotidyltransferase; n=2;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
TRNA nucleotidyltransferase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 437
Score = 64.9 bits (151), Expect = 3e-09
Identities = 48/177 (27%), Positives = 79/177 (44%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
++ I G +RD L+G P + D T A P +F E + E +G +T
Sbjct: 21 YQAYIYGACIRDYLLGKEPINWDITTNALPNNTVVIFDENEGFTSIPSVEDYGIVTLHFK 80
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYED 674
E+ +V T R RFAD D D +D T+NS+ + D + G D
Sbjct: 81 G-ESCQVNTFRTGEAR--RFAD-----DISEDLLHKDFTMNSIAYNEQAGIVDPYNGVGD 132
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGN 845
++KR + +P +++ED RI+R RF ++ K + + + LK+ V G+
Sbjct: 133 IEKRLIRCAQNPYEQMQEDSARILRAVRFESQLGFKIEAELLQAMKDLKDTVPASGS 189
>UniRef50_O97001 Cluster: Possible tRNA nucleotidyltransferase; n=3;
Leishmania|Rep: Possible tRNA nucleotidyltransferase -
Leishmania major
Length = 523
Score = 63.7 bits (148), Expect = 6e-09
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Frame = +3
Query: 303 DKYKHEIRIAGGAVRDLLMGLTPKDLD----------------FATTATPEEMKEMFTAE 434
+K K +R+AGG VRD+L+GL D+D FA + ++
Sbjct: 30 NKLKATLRVAGGWVRDMLLGLHSNDIDIAIETHAGAKIVTGEAFAHRVSEYQLAHGGRGH 89
Query: 435 EVRMINVNG--ERH-GTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRR 602
V +I N +H T T R+++ E+ LR D+ T + R V+ + DA RR
Sbjct: 90 TVSVIRANPALSKHIETATVRVHEIP-VELCALRTDVYTNESRIPQVRPAAPVE-DAQRR 147
Query: 603 DLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
D TIN++F G V DY G EDL+ R + +P +D LR++R RF G++
Sbjct: 148 DFTINALFYNLHTGMVEDYTTGLEDLRLRIIRCPLEPRTTFMDDPLRLLRGVRFVGQL 205
>UniRef50_Q5NIG4 Cluster: CCA-adding enzyme; n=12; Francisella
tularensis|Rep: CCA-adding enzyme - Francisella
tularensis subsp. tularensis
Length = 360
Score = 63.7 bits (148), Expect = 6e-09
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 6/191 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GGAVRD+L+G+TPKD D+ E+ EM +++ I+ +
Sbjct: 5 LVGGAVRDMLLGITPKDKDWVVVGATED--EMLANGFIKIA-------ANFPVFIHPQTK 55
Query: 507 FEVTTLRIDMVTDGRFA--DVQFTKDWKL--DANRRDLTINSMFLGFDGSVYDYFYGYED 674
E R + T + +V F+K L D RRDLTINS+ + + V D F G D
Sbjct: 56 QEYALARSEKKTASGYHGFEVNFSKYITLEDDLKRRDLTINSIAIDQNNKVIDPFNGQAD 115
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVH--GLGNI 848
LQ R + + ED LR++R RF +++ + +E L ++K V L ++
Sbjct: 116 LQNR---ILRHTSIAFIEDPLRVVRLARFKAQLSNFNFSIAQEMLALIKELVKTGELNHL 172
Query: 849 SGERIWGELKK 881
+ ER+ E K
Sbjct: 173 TRERLHIEFVK 183
>UniRef50_A6Q2Y3 Cluster: RNA nucleotidyltransferase; n=1;
Nitratiruptor sp. SB155-2|Rep: RNA
nucleotidyltransferase - Nitratiruptor sp. (strain
SB155-2)
Length = 392
Score = 62.5 bits (145), Expect = 1e-08
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 4/207 (1%)
Frame = +3
Query: 273 EEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE-EVRMI 449
+E+ LKK F + + GGAVRDL+ + K A E+ + E + M+
Sbjct: 24 KELDILKKFFLDKSDRVYMVGGAVRDLIRIVLEKQ-PIAIVDLDIEVYGIKPKEFDALML 82
Query: 450 NVNGERHGTITARINDKENFEVTTLRID-MVTDGRFA-DVQFTKDWKLDANRRDLTINSM 623
+ + G KE+ +++ RI+ V G A V KD K + RRD +N++
Sbjct: 83 QLGAKGVGKSFFVYKYKEHIDISLPRIESKVGRGHKAFVVDLAKDEKSASIRRDFKMNAL 142
Query: 624 FLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEE 800
L F G + D++ G ED++ +R++ + D + + KED LR++R +F R + E+
Sbjct: 143 MLNIFTGELLDFWGGVEDIKHKRISII-DAE-KFKEDSLRVLRAMQFSARFGYR---IEK 197
Query: 801 ETLXVLKNNVHGLGNISGERIWGELKK 881
+ V++ L ++S ERI+ E +K
Sbjct: 198 RSCKVMQG--IALDDLSHERIFWEFEK 222
>UniRef50_A3DD90 Cluster: Polynucleotide adenylyltransferase region;
n=1; Clostridium thermocellum ATCC 27405|Rep:
Polynucleotide adenylyltransferase region - Clostridium
thermocellum (strain ATCC 27405 / DSM 1237)
Length = 877
Score = 62.5 bits (145), Expect = 1e-08
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 6/201 (2%)
Frame = +3
Query: 279 VIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVN 458
+I+ KI D + GG VRDL++G+ D+D E A+ +
Sbjct: 467 LIEAGKIADDVGLNAYVVGGFVRDLILGVENFDIDIVVEGDALMFSEKL-AQHYQAHLTK 525
Query: 459 GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFL--- 629
+R GT + D +V T R + V K D RRD TINSM +
Sbjct: 526 HDRFGTAVVVLEDDFKIDVVTARKEYYEYPASLPVVEGGTIKDDLFRRDFTINSMAIKLN 585
Query: 630 --GFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEE 803
GF G++ D++ G DLQ + + ++ ED RI R RF R K + EE
Sbjct: 586 KSGF-GNIVDFYGGRRDLQMGLIRIL--YNLSFVEDPTRIFRAIRFEQRYDFKMEEKTEE 642
Query: 804 -TLXVLKNNVHGLGNISGERI 863
+ +++ + LG +S ERI
Sbjct: 643 FAIKAIESGI--LGKVSHERI 661
>UniRef50_Q7U350 Cluster: CCA-adding enzyme; n=2; Candidatus
Blochmannia|Rep: CCA-adding enzyme - Blochmannia
floridanus
Length = 411
Score = 62.5 bits (145), Expect = 1e-08
Identities = 49/185 (26%), Positives = 88/185 (47%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GGAVRD L+ L + D+ T + + EM + + V + + + +++
Sbjct: 5 LVGGAVRDSLLNLPITEKDWVITGSSAQ--EMLS---IGYEQVGKDFPVFLHPKSHEEYA 59
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKR 686
T ++ G + + + D RRDLTIN+M +G++ D + G +D+Q R
Sbjct: 60 LARTERKLGSGYTGFICHTEPSITIEEDLYRRDLTINAMAYDMNGNLLDPYNGQKDIQLR 119
Query: 687 RVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIW 866
+ V + ED LR++R RF ++ ET ++ + +H L ++S ER+W
Sbjct: 120 LLRHVSN---AFYEDPLRVLRVARFAAKLKNIGFTIAIETFEIMTHMIHELKSLSPERVW 176
Query: 867 GELKK 881
E KK
Sbjct: 177 METKK 181
>UniRef50_Q76YD7 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 347
Score = 62.1 bits (144), Expect = 2e-08
Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 6/193 (3%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM----KEMFTAEEVRMINVNGERHGTITA 485
I + GGAVRD++M PKD D+ +T +EM + A+ ++ G+ +
Sbjct: 3 IYLVGGAVRDMVMNREPKDRDYVVVGSTHDEMIAKGYKQVGADFPVYLDHLGQEYALART 62
Query: 486 RINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYG 665
+ + + D VTD +V +D K RRD T+N+M LG +G V D + G
Sbjct: 63 ERSTGKGYN------DFVTDFN-PNVTLEQDLK----RRDFTMNAMALGMNGVVIDPYNG 111
Query: 666 YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEE-TLXVLKNNVHGLG 842
+D+ K RV V +P ED +R++R RF R + E L +K+ +
Sbjct: 112 QQDI-KERVVNVVNPQA-FHEDPVRVLRACRFAARYDFRLSTLTMECILRCIKDG--RMD 167
Query: 843 NISGERIWGELKK 881
+++ ERIW E +K
Sbjct: 168 HLTSERIWLEFEK 180
>UniRef50_P45269 Cluster: Multifunctional CCA protein [Includes:
CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)]; n=17; Gammaproteobacteria|Rep:
Multifunctional CCA protein [Includes: CCA-adding enzyme
(EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)] - Haemophilus influenzae
Length = 416
Score = 62.1 bits (144), Expect = 2e-08
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 7/195 (3%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGT-ITARIN 494
++ + GGAVRD L+GL KD D+ A+ ++++ ++ G +N
Sbjct: 2 KVYLVGGAVRDQLLGLPVKDRDWIVVG----------ADPATLLSLGYQQVGKDFPVFLN 51
Query: 495 DKENFEVTTLRIDMVTD----GRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFY 662
K E R + + G D T + D RRDLTIN+M DG + D +
Sbjct: 52 PKTKEEYALARTERKSSAGYTGFICDFSPTITLEQDLIRRDLTINAMAQSEDGEIIDPYG 111
Query: 663 GYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG-- 836
G +DL+ R + + ED LR++R RF R ETL ++
Sbjct: 112 GKQDLENRILRHISP---AFSEDPLRVLRVARFAARYHSLGFKIASETLALMAELAQSGE 168
Query: 837 LGNISGERIWGELKK 881
L +++ ERIW E +K
Sbjct: 169 LQHLTAERIWLETEK 183
>UniRef50_A3JBM7 Cluster: Fused tRNA nucleotidyl
transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase
and phosphatase; n=3; Alteromonadales|Rep: Fused tRNA
nucleotidyl transferase/2'3'-cyclic
phosphodiesterase/2'nucleotidase and phosphatase -
Marinobacter sp. ELB17
Length = 386
Score = 61.7 bits (143), Expect = 2e-08
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+I + GGAVRD L+GL KD D+ ATPE M + R + + + +
Sbjct: 6 DIYLVGGAVRDQLLGLPVKDRDWVVVGATPETM----LTQGFRQVGADFP----VFLHPH 57
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKL--DANRRDLTINSMFLGFDGSVYDYFYGY 668
E + + V D L D RRDLT+N+M G + D F G
Sbjct: 58 THEEYALARTERKQGRGYHGFTVYSAPDVTLEEDLKRRDLTVNAMAQAEGGEIIDPFGGQ 117
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK--NNVHGLG 842
+DLQ R + V + ED LRI+R RF R A + TL +++ + +
Sbjct: 118 QDLQDRLLRHVSE---AFAEDPLRILRTARFAARFAPQGFAVHPHTLQLMQAMTDAGEVR 174
Query: 843 NISGERIWGELKK 881
++ ER+W EL++
Sbjct: 175 HLVPERVWQELQR 187
>UniRef50_A7GXZ4 Cluster: PolyA polymerase family protein; n=2;
Campylobacter|Rep: PolyA polymerase family protein -
Campylobacter curvus 525.92
Length = 383
Score = 61.3 bits (142), Expect = 3e-08
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 3/203 (1%)
Frame = +3
Query: 285 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGE 464
+++++ + + + GG VRD L+G D D E+ +++ + ++ G
Sbjct: 16 EVRRLLAPHTTRVYLVGGCVRDTLLGREIYDYDI-------EIYDIYPHKFDALMQSIGA 68
Query: 465 RHGTITARINDKENFEVTTLRIDMVTDGRFAD--VQFTKDWKLDANRRDLTINSMFLG-F 635
+ I +NF++ R + T R D V + D + RRD TIN+M + F
Sbjct: 69 SGVGKSYFIYKFKNFDLGLPRSESKTGERHKDFAVSYINDPRTACLRRDFTINAMMINIF 128
Query: 636 DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXV 815
DG + D++ G +DL+ + + + + + ED LR++R +F R+ ETL +
Sbjct: 129 DGELLDFYGGRDDLRGQILRHI--DEAKFCEDALRVLRGVQFSARLGF---TIAPETLNL 183
Query: 816 LKNNVHGLGNISGERIWGELKKF 884
+K L N+S ERI EL KF
Sbjct: 184 MKK--LPLENLSRERINAELVKF 204
>UniRef50_Q3E7W1 Cluster: Uncharacterized protein At1g28090.1; n=4;
Arabidopsis thaliana|Rep: Uncharacterized protein
At1g28090.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 541
Score = 61.3 bits (142), Expect = 3e-08
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Frame = +3
Query: 237 KVDSPEF---KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPE 407
K+D+ EF +S+ + + K ++ + GG VRDL++ PKD D TTA +
Sbjct: 84 KLDANEFGIQRSMIPDSTRMVLNKLKKKGFQVYLVGGCVRDLILDRIPKDFDVITTAELK 143
Query: 408 EMKEMFTAEEV--RMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRF-----ADVQ 566
E++++F ++ R + H + I + +F T+ R + F D +
Sbjct: 144 EVRKVFPGCQIVGRRFPIC---HVYVDDIIIEVSSFS-TSARTGKAPNKSFRRPAGCDER 199
Query: 567 FTKDWKLDANRRDLTINS-MFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRI 743
WK + +RD T+N MF + VYDY G EDL+ +V V ++ ED RI
Sbjct: 200 DYIRWK-NCLQRDFTVNGLMFDPSENVVYDYIGGVEDLRNSKVRTVSAANLSFVEDTARI 258
Query: 744 MRYFRFYGRI 773
+R R R+
Sbjct: 259 LRAIRIAARL 268
>UniRef50_Q191T3 Cluster: Polynucleotide adenylyltransferase region
precursor; n=3; Bacteria|Rep: Polynucleotide
adenylyltransferase region precursor - Desulfitobacterium
hafniense (strain DCB-2)
Length = 873
Score = 60.9 bits (141), Expect = 4e-08
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 6/229 (2%)
Frame = +3
Query: 141 LRGTCSVTDPSRRRFRSKMDLNLKCRENPIVIKVDSPE-FKSIFTEEVIDLKKIFDKYKH 317
+ G+ T+ S R RS L RE+ + + + PE +S+ +++ D+ +
Sbjct: 422 IHGSAVPTEMSLTRHRS-----LAMREDILGLLEELPEQIRSLLAAA----QQVADELGY 472
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
+ + GG VRD+L+ + +DLDF + V ++ GT D
Sbjct: 473 SVFVVGGFVRDILLKVPTQDLDFVIEGDGHAFARALAQRLQDVQVVFHDQFGTARLDFAD 532
Query: 498 KENFEV-TTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFY 662
+ +V ++ R D + G V+ ++ + D RRD TIN+M + + G + DY+
Sbjct: 533 GSHLDVASSRREDYSSPGALPQVEESR-LRDDMFRRDFTINAMAIAVNSVRYGELVDYYG 591
Query: 663 GYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL 809
G DL++ + F+ ++ ED RI+R RF GR + E L
Sbjct: 592 GLRDLKQGEIRFL--HNLSFIEDPTRILRALRFAGRYGFRLAKETREGL 638
>UniRef50_Q1QC26 Cluster: Polynucleotide adenylyltransferase region;
n=2; Psychrobacter|Rep: Polynucleotide
adenylyltransferase region - Psychrobacter
cryohalolentis (strain K5)
Length = 390
Score = 60.5 bits (140), Expect = 6e-08
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 8/193 (4%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAE-----EVRMINVNGERHGTI 479
++ + GGAVRD L+G KD DF AT EM E + V + VN E +
Sbjct: 2 QVYLVGGAVRDQLLGRPIKDKDFVVVGATVTEMLEAGFQQVGADFPVFLHPVNREEYA-- 59
Query: 480 TARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYF 659
AR K+ + D D +D ++A ++T + G V DY+
Sbjct: 60 LARTERKQGLGYQGFSVHASIDVSLKDDLQRRDLTINAMAIEVTSLTDDTPISGDVIDYY 119
Query: 660 YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG- 836
G +D++ + + V ED LR++R RFY R ++TL +++ V
Sbjct: 120 GGLQDIENKTLRHVSS---AFNEDPLRVLRTARFYSRYYDLGFTIADDTLVLMRELVASG 176
Query: 837 -LGNISGERIWGE 872
L ++S ERIW E
Sbjct: 177 ELTHLSSERIWQE 189
>UniRef50_A2DV13 Cluster: PolyA polymerase family protein; n=1;
Trichomonas vaginalis G3|Rep: PolyA polymerase family
protein - Trichomonas vaginalis G3
Length = 454
Score = 60.5 bits (140), Expect = 6e-08
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Frame = +3
Query: 240 VDSPEFKSIFTEEVIDL-KKIFDKYKHEI---RIAGGAVRDLLMGLTPKDLDFATTAT-- 401
++ E + F ++VI+L KK + + + RI GG VRD L+G D+DF+ T
Sbjct: 11 LEKGELLTPFEKQVIELIKKTCESFAPQTVIARIVGGWVRDKLLGSHSDDIDFSIEGTDG 70
Query: 402 ---PEEMKEMFTAEE----VRMINVNGERH-GTITARINDKENFEVTTLR-IDMVTDGRF 554
++K++ + E V M N + H G+ + + ++ LR D TD R
Sbjct: 71 LTFANKIKKVASKAEFPDLVVMANPDQSAHIGSAKVYLTPEFYIDICGLRWDDYSTDSRI 130
Query: 555 ADVQFTKDWKLDANRRDLTINSMFLGFDG-SVYDYFYGYEDLQKRRVAFVGDPDVRVKED 731
+ + DA RRD+TINS+FL + V D+ G DL+ R + +D
Sbjct: 131 PVITVGTP-QQDAIRRDVTINSIFLNINTFKVEDFTNGIPDLENRLLRTPQPAGQSFLDD 189
Query: 732 YLRIMRYFRFYGR 770
LRI+R FRF R
Sbjct: 190 PLRILRIFRFGAR 202
>UniRef50_A0L6A0 Cluster: Polynucleotide adenylyltransferase region;
n=1; Magnetococcus sp. MC-1|Rep: Polynucleotide
adenylyltransferase region - Magnetococcus sp. (strain
MC-1)
Length = 473
Score = 60.1 bits (139), Expect = 7e-08
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Frame = +3
Query: 321 IRIAGGAVRDLLMG-LTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
I + GG +RD L T +LD +E +E+ + V G+R T+ +
Sbjct: 27 IYMVGGGLRDSLRHRFTAHELDLVVLKPLDEARELLQKAGYPAV-VQGQRPNTLILPLKR 85
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM-FLGFDGSVYDYFYGYED 674
+E T+ + G V+ + + D RD+T+N++ + DG + D F G +D
Sbjct: 86 QE--PPNTINLSCCCGG----VKAERGIEEDLRHRDITVNAIAYCWPDGPLIDPFNGVKD 139
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPD 788
L++ R+ V + V+ED LR +R+FRF ++A +PD
Sbjct: 140 LEENRIRLVNGEET-VREDPLRALRFFRFIIQLAGEPD 176
>UniRef50_O66728 Cluster: Poly A polymerase; n=1; Aquifex
aeolicus|Rep: Poly A polymerase - Aquifex aeolicus
Length = 824
Score = 59.7 bits (138), Expect = 1e-07
Identities = 54/166 (32%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG-ERHGTITARINDKE 503
I GG VRD+L+G D+DF E+ + +NV+ GT +I +
Sbjct: 456 IVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARR--HGVNVHPFPEFGTAHLKIGKLK 513
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYGYE 671
T R G + V+ K D RRD TIN+M + + G++ DYF G
Sbjct: 514 LEFATARRETYPRPGAYPKVE-PASLKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLR 572
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL 809
DL K +V V P V ED +RI+R RF GR+ K E+ L
Sbjct: 573 DL-KDKVIRVLHP-VSFIEDPVRILRALRFAGRLNFKLSRSTEKLL 616
>UniRef50_A6VU49 Cluster: Polynucleotide adenylyltransferase region;
n=2; Marinomonas|Rep: Polynucleotide adenylyltransferase
region - Marinomonas sp. MWYL1
Length = 365
Score = 59.7 bits (138), Expect = 1e-07
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARI 491
+++ + GGAVRD L+ L D D+ T ATPE++ E + G++ I
Sbjct: 5 YQVYLVGGAVRDALLELPVIDHDWVVTGATPEQL-------EKKGFQQVGKQFPVFLHPI 57
Query: 492 NDKENFEVTTLRIDMVTDGRFADVQFTKDWKL--DANRRDLTINSMFLGFDGSVYDYFYG 665
+ KE + + F+ + L D RRDLTIN++ +G++ D F G
Sbjct: 58 S-KEEYALARKEKKQGEGYTGFICDFSPEISLEEDLERRDLTINAIAQDQNGTLIDPFNG 116
Query: 666 YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK--NNVHGL 839
+DL R V + V ED LR++R RF R ET+ +++ ++ L
Sbjct: 117 QQDLLDRVFRHVSNAFV---EDPLRVLRVARFAARFHHFGFTIAPETMSLMREISSSGEL 173
Query: 840 GNISGERIWGELKK 881
+S ERIW EL+K
Sbjct: 174 SALSAERIWKELEK 187
>UniRef50_Q4DE28 Cluster: TRNA nucleotidyltransferase, putative;
n=3; Trypanosoma|Rep: TRNA nucleotidyltransferase,
putative - Trypanosoma cruzi
Length = 526
Score = 59.7 bits (138), Expect = 1e-07
Identities = 58/172 (33%), Positives = 83/172 (48%), Gaps = 21/172 (12%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATP--EEMKEMFTAE-------------EVRMINV 455
+R+AGG VRD L+GL +D+D A ++ E+F E V +I V
Sbjct: 37 LRVAGGWVRDALLGLHSQDIDIAIESSDLRHVSGELFAREVSAYQEAMGMAARTVSVIRV 96
Query: 456 NGE--RH-GTITARINDKENFEVTTLRIDMVT--DGRFADVQFTKDWKLDANRRDLTINS 620
N E +H T T + D E LR D T + R +V+ + DA RRD TIN+
Sbjct: 97 NPELSKHIETATVCVCDTP-IEFCALRHDEYTRSNSRIPEVRPATPLE-DALRRDFTINA 154
Query: 621 MFLGFDG-SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
+F V DY G EDLQ+R + +P +D LR++R RF G++
Sbjct: 155 LFYNLHTMEVEDYTSGLEDLQRRVLRCPLEPRETFTDDPLRLLRGIRFVGQL 206
>UniRef50_Q62HE1 Cluster: PolyA polymerase; n=45; cellular
organisms|Rep: PolyA polymerase - Burkholderia mallei
(Pseudomonas mallei)
Length = 515
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +3
Query: 588 DANRRDLTINSMFLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFY 764
DA RRD TIN+M+ +V DY G D++ R + +GDP R +ED +R++R RF
Sbjct: 198 DAARRDFTINAMYYDPASQTVLDYHDGMADMRARLLRMIGDPATRYREDPVRMLRVVRFA 257
Query: 765 GRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
++ + EE+T +K + N+ R++ E+ K
Sbjct: 258 AKLGF---DIEEKTREPIKELADLINNVPAARLFDEMLK 293
Score = 51.6 bits (118), Expect = 3e-05
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
I GGAVRDLL+G+ PKD D AT ATP E++ +F R+I G R + + +E
Sbjct: 89 IVGGAVRDLLLGIAPKDFDVATDATPTEVQRLF--RRARLI---GRRFQIVHVQFG-QEL 142
Query: 507 FEVTTLR 527
EV+T R
Sbjct: 143 IEVSTFR 149
>UniRef50_Q3AAR6 Cluster: PolyA polymerase family protein; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: PolyA
polymerase family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 864
Score = 59.3 bits (137), Expect = 1e-07
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG VRDLL+G KDLD + + + + ER T + + + +
Sbjct: 478 LVGGIVRDLLLGHKQKDLDIVVEGDALVLAQEVGKTLSAIKFIPHERFKTASIILKNGQK 537
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFL----GFDGSVYDYFYGYED 674
+ +T R++ + D RRD TINSM + G G ++D F G D
Sbjct: 538 IDFSTSRVEFYQHPAALPEVEVSTIREDLYRRDFTINSMAIEITYGHIGELFDPFGGLLD 597
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGNI 848
L++ + + ++ ED RI+R RF GR K EE T +L + + G L +
Sbjct: 598 LREGIIRVL--HNLSFVEDPTRILRALRFLGRFNFK---LEENTEKLLVDAIAGGFLNLV 652
Query: 849 SGERIWGELK 878
S RI ELK
Sbjct: 653 SSARILYELK 662
>UniRef50_A3WPG7 Cluster: TRNA nucleotidyltransferase; n=1;
Idiomarina baltica OS145|Rep: TRNA
nucleotidyltransferase - Idiomarina baltica OS145
Length = 366
Score = 59.3 bits (137), Expect = 1e-07
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEM---FTAEEVRMINVNGERHGTITA 485
+I + GGAVRD L+G D D+ ATP++M + ++ + R A
Sbjct: 6 DIYLVGGAVRDQLLGCPVGDKDYVVVGATPDQMLALGYQQVGKDFPVFLHPQTREEYALA 65
Query: 486 RINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYG 665
R K+ T +++ T + T+ D RRDLTIN++ G + D + G
Sbjct: 66 RTERKQGQGYTGFQVNTET-----TITLTQ----DLERRDLTINAIAEDEHGHLIDPYGG 116
Query: 666 YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--L 839
+D++++ + V V ED LR++R RFY R +ET ++K L
Sbjct: 117 QQDIERKLLRHVSPAFV---EDPLRVLRVARFYARFKPLGFTVAQETKNLMKAMARSGEL 173
Query: 840 GNISGERIWGELKK 881
+ ER+W E +K
Sbjct: 174 KTLVAERVWREWEK 187
>UniRef50_A0XYS5 Cluster: TRNA nucleotidyl transferase; n=2;
Alteromonadales|Rep: TRNA nucleotidyl transferase -
Alteromonadales bacterium TW-7
Length = 417
Score = 59.3 bits (137), Expect = 1e-07
Identities = 59/194 (30%), Positives = 87/194 (44%), Gaps = 7/194 (3%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTA-TPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
+ + GGAVRD L+ + KD D+ TP M E + + + + + + +
Sbjct: 8 VYLVGGAVRDKLLNIASKDNDYVVIGETPSTM------ESLGFLPIGSDFPVYLHPKTKE 61
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
+ T + G D + + D RRDLTINSM L +G + D F G DL
Sbjct: 62 EYALGRTERKSGKGYTGFVVDASPSVTLEEDLARRDLTINSMALDENGKIIDPFNGQHDL 121
Query: 678 QKRRV-----AFVGDPDVRVKEDYLRIMRYFRFYGR-IALKPDNHEEETLXVLKNNVHGL 839
Q + + AFV DP VRV LRI R+ YG + P + + LKN L
Sbjct: 122 QNKILRHTTHAFVEDP-VRV----LRIARFLARYGSDWQIHPSTY--ALMRELKNKGE-L 173
Query: 840 GNISGERIWGELKK 881
++ ER+W E +K
Sbjct: 174 NHLVPERVWLETEK 187
>UniRef50_A4RUG6 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 525
Score = 59.3 bits (137), Expect = 1e-07
Identities = 61/191 (31%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Frame = +3
Query: 276 EVID-LKKIFDKYKHEI--RIAGGAVRDLLMGLTPKDLDFA-TTATPEEMKEMFTAE-EV 440
EV D L + + +K ++ R+AGG VRD L+G D+D A T +E E A E
Sbjct: 32 EVFDTLLAVVEHFKLDVTLRVAGGWVRDKLVGRESDDIDVALDTMLGKEFAEKVNAYLEA 91
Query: 441 RMINVNGERHGTITARINDKENFEVTTLRI-----DMVT--------DGRFADVQFTKDW 581
+ + G G I + ++ E T+R+ D+V D R ++QF
Sbjct: 92 QGMETKG--IGVIQSNPEQSKHLETATMRVRDVWLDLVNLRSENYSEDSRIPEMQFGTA- 148
Query: 582 KLDANRRDLTINSMFLGFDGSVYDYF--YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYF 755
K DA RRDLTIN++F + + F G EDL + V P +D LRI+R
Sbjct: 149 KDDAFRRDLTINALFYNINEKKVEDFTERGIEDLSRGVVRTPLPPRTTFLDDPLRILRAV 208
Query: 756 RFYGRIALKPD 788
RF R D
Sbjct: 209 RFAARFGFDVD 219
>UniRef50_A4RHL3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 524
Score = 59.3 bits (137), Expect = 1e-07
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN--VNGERHGT------ 476
+R AGG VRD L+G D+D A + E FT E V N N +RHG
Sbjct: 65 LRWAGGWVRDKLLGTESHDIDVAISCMTGEA---FTRELVAFCNDAANRDRHGISEGDIG 121
Query: 477 ----ITARINDKENFEVTTLR-----IDMVT--------DGRFADVQFTKDWKLDANRRD 605
+ A + ++ E T R +D V D R ++F + DA RRD
Sbjct: 122 NLHKVAANPDKSKHLETVTTRMFGLEVDFVNLRKETYTEDSRNPQMEFGTAEE-DALRRD 180
Query: 606 LTINSMFLGFDGS-VYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALK 782
T+N++F S V D+ G D+ ++ + +P K+D LR++R RF R+
Sbjct: 181 ATVNALFYNIHTSEVEDFVGGLRDMDQKLIRTPLEPLQTFKDDPLRVLRLVRFASRLGFT 240
Query: 783 PDNHEEETLXVLKNNVHGLG-NISGERIWGELKK 881
D E+T+ + + L IS ER+ E++K
Sbjct: 241 IDPSAEKTMSA-PDVLEALRLKISRERVGVEVEK 273
>UniRef50_UPI00006CBA87 Cluster: polyA polymerase family protein;
n=1; Tetrahymena thermophila SB210|Rep: polyA polymerase
family protein - Tetrahymena thermophila SB210
Length = 516
Score = 58.8 bits (136), Expect = 2e-07
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFAT-TATPEEM-------------KEMFTAEEVRMINVN 458
+R AGG VRD ++G D+D T T E+ +++ + V N +
Sbjct: 35 LRSAGGWVRDKILGQECHDIDITLDTMTGEQFINLLIDYLKEKGQEDLISGHGVIKSNPD 94
Query: 459 GERH-GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGF 635
+H T+T +I + ++ LR + T R ++F + DA RRDLTINSMF
Sbjct: 95 KSKHLETVTFKIFGYD-IDIANLRHEEYTKSRIPTMKFGTPLQ-DAERRDLTINSMFYNI 152
Query: 636 DGSVYDYF--YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL 809
+ + F G DLQ + + DP +D LRI+R FRF + + E L
Sbjct: 153 NTCQIEDFTGKGLSDLQNKIIRTPLDPTQTFIDDPLRILRTFRFATKYSFSIVPDIIEAL 212
Query: 810 XVLKNNVHGLGNISGERIWGELKK 881
+ + +S ERI EL+K
Sbjct: 213 KQEQIRISLEEKVSRERIRTELEK 236
>UniRef50_A0BX57 Cluster: Chromosome undetermined scaffold_133,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 507
Score = 58.8 bits (136), Expect = 2e-07
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEE-----MKEMFTAEEVRM-------INVNGE 464
+R+AGG VRD LMG D+D E MK+ F ++ +++ +N
Sbjct: 51 LRVAGGWVRDKLMGNESHDIDITIDNMSGEQFVLKMKDYFESKNIKVSGFGVTKLNPEQS 110
Query: 465 RH-GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDG 641
+H T +I D ++ + LR + T + DA RRDLTINSMF +
Sbjct: 111 KHLETACIKILD-QSIDFVNLRGETYTQNSRTPQIVVGTPEQDAFRRDLTINSMFYNLNT 169
Query: 642 SVYDYF--YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGR 770
+ G +DL+ + DP + K+D LRI+R FRF R
Sbjct: 170 QEIEDLTKMGLQDLENGIIRTPLDPYITFKDDPLRILRTFRFATR 214
>UniRef50_Q9WZH4 Cluster: TRNA nucleotidyl transferase-related
protein; n=2; Thermotoga|Rep: TRNA nucleotidyl
transferase-related protein - Thermotoga maritima
Length = 863
Score = 58.4 bits (135), Expect = 2e-07
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Frame = +3
Query: 288 LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGER 467
L K D+ + + GG VRDLL+G+ D+D E E + + V ++
Sbjct: 461 LGKFGDEVNMPVYVVGGFVRDLLLGIKNLDIDIVVEGNALEFAE-YAKRFLPGKLVKHDK 519
Query: 468 HGTITARINDKENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTINSMFLGFD-- 638
T + + ++ T R++ + + DV+ + K D RRD TIN+M + +
Sbjct: 520 FMTASLFLKGGLRIDIATARLEYYESPAKLPDVEMS-TIKKDLYRRDFTINAMAIKLNPK 578
Query: 639 --GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLX 812
G + D+F GY DL++ + + + +D RI+R RF R + EE T
Sbjct: 579 DFGLLIDFFGGYRDLKEGVIRVL--HTLSFVDDPTRILRAIRFEQRFDFR---IEETTER 633
Query: 813 VLKNNVHG--LGNISGERIWGELKK 881
+LK V L +G R+ EL+K
Sbjct: 634 LLKQAVEEGYLERTTGPRLRQELEK 658
>UniRef50_Q88QU2 Cluster: Multifunctional CCA protein [Includes:
CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)]; n=7; Gammaproteobacteria|Rep: Multifunctional
CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.25)
(EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA
adenylyl-/cytidylyl- transferase) (tRNA
CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC
3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-);
Phosphatase (EC 3.1.3.-)] - Pseudomonas putida (strain
KT2440)
Length = 368
Score = 58.4 bits (135), Expect = 2e-07
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENF 509
GGAVRD L+G D+D+ AT EEM A R + + ++ K
Sbjct: 7 GGAVRDRLLGRPVSDIDWLVVGATVEEM----LANGYRPVGAD------FPVFLHPKTGE 56
Query: 510 EVTTLRIDMVTDGRFADVQF--TKDWKLDAN--RRDLTINSMFLGFDGSVYDYFYGYEDL 677
E R + + + F + D L+ + RRDLTIN+M G+VYD + G DL
Sbjct: 57 EYALARTERKSGRGYGGFTFHASPDVTLEEDLIRRDLTINAMAEDEAGTVYDPYQGKNDL 116
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKN-NVHG-LGNIS 851
+R + V ED LR++R RF R A +ETL +++ + G L ++
Sbjct: 117 DQRLLRHVSP---AFAEDPLRVLRVARFAARYAPLGFRVADETLALMRQISASGELQALT 173
Query: 852 GERIWGELKK 881
ER W E+++
Sbjct: 174 AERSWKEIER 183
>UniRef50_A6DBJ0 Cluster: Putative RNA nucleotidyltransferase; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative RNA
nucleotidyltransferase - Caminibacter mediatlanticus
TB-2
Length = 352
Score = 58.0 bits (134), Expect = 3e-07
Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 3/201 (1%)
Frame = +3
Query: 288 LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGER 467
LK F + + + GG VRD +G+TP + D E+ ++ + +++ G +
Sbjct: 11 LKNFFAPFTKRVYLVGGCVRDEFLGITPNEFDL-------EVYDISPQKFDKLMKKLGAK 63
Query: 468 HGTITARINDKENFEVTTLRID-MVTDG-RFADVQFTKDWKLDANRRDLTINSMFLG-FD 638
+ + +NF++ R + + G R +V+ +D KL + RRD T+N++ +
Sbjct: 64 GVGKSFFVYKWKNFDIALPRKETKIAKGHRGFEVEIIQDEKLASKRRDFTMNALMENIYT 123
Query: 639 GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVL 818
+ D++ G +D++ + + + D ED LR++R +F R+ K ++T+
Sbjct: 124 NEILDFWGGMKDIKNKIIRHIDDK--TFIEDSLRVLRAMQFASRLHFK---IHKKTIEHC 178
Query: 819 KNNVHGLGNISGERIWGELKK 881
K L ++S +RI+ E +K
Sbjct: 179 KK--IDLNDLSKDRIYMEFEK 197
>UniRef50_Q8VXU8 Cluster: AT5g23690/MQM1_4; n=5; core
eudicotyledons|Rep: AT5g23690/MQM1_4 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 527
Score = 58.0 bits (134), Expect = 3e-07
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 11/181 (6%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
H++ + GG VRDL++ TPKD D T+A E+ F E + G R I
Sbjct: 95 HDVYLVGGCVRDLILKRTPKDFDILTSAELREVVRTFPRCE-----IVGRRFPICHVHIG 149
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDAN----------RRDLTINS-MFLGFDG 641
D + EV++ R + + D + +RD TIN MF +
Sbjct: 150 D-DLIEVSSFSTSAQNSSRNTRTECKESSGSDGDEDCIRLNNCLQRDFTINGLMFDPYAK 208
Query: 642 SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK 821
VYDY G ED++K +V +D RI+R R R+ + +ET +K
Sbjct: 209 VVYDYLGGMEDIRKAKVRTEIHAGTSFHQDCARILRAIRIAARLGFR---MSKETAHFIK 265
Query: 822 N 824
N
Sbjct: 266 N 266
>UniRef50_A2FXY8 Cluster: PolyA polymerase family protein; n=2;
Trichomonas vaginalis G3|Rep: PolyA polymerase family
protein - Trichomonas vaginalis G3
Length = 449
Score = 58.0 bits (134), Expect = 3e-07
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 503
R+AGG VRD L+ D+D E + AE+ + + N K+
Sbjct: 40 RVAGGWVRDKLLNKECDDIDICVEGCTSEEFALQLAEQYPK-----KATKIVVFEENPKQ 94
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKL------DANRRDLTINSMFLGF-DGSVYDYFY 662
+ T+R+ + + D+ + L DA RDL+IN++F D V D+
Sbjct: 95 AKFMKTVRV-CIYGSAWIDICNLRGENLVATALTDAQHRDLSINALFYNITDSKVEDFVG 153
Query: 663 GYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGL- 839
G +DL+ + + PDV ED LRI+R RF+ R K D E L + K ++
Sbjct: 154 GIQDLKNQVIRTPISPDVTFTEDPLRIIRSIRFHVRYGYKID---ENLLEIAKLHLSDFE 210
Query: 840 GNISGERIWGELKK 881
+S ERI E+ K
Sbjct: 211 QRVSKERIASEIIK 224
>UniRef50_Q5KM57 Cluster: TRNA adenylyltransferase, putative; n=2;
Filobasidiella neoformans|Rep: TRNA adenylyltransferase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 504
Score = 58.0 bits (134), Expect = 3e-07
Identities = 60/196 (30%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
E RIAGG VRD L+ L DLD A + + + ++ +V G + A
Sbjct: 53 ECRIAGGWVRDKLLSLPSSDLDIALSIPSGHSFAVAFVDFLKAKDVPTGSVGKVVANPEQ 112
Query: 498 KENFEVTTLRI-----DMV-------TDGRFADVQFTKDWKLDANRRDLTINSMFLG-FD 638
++ E T RI D V D R V+ ++ DA+RRDLTIN++F
Sbjct: 113 SKHLETGTTRIMGLECDFVGLRSETYADSRIPQVKPGTPFE-DASRRDLTINALFYNVHT 171
Query: 639 GSVYDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXV 815
V DY G DL+ R P ++D LRI+R RF R L +++
Sbjct: 172 RQVEDYTKMGLSDLENRIARTPLPPRQTFQDDPLRIVRCVRFASRFNLAIAQEVVDSIKQ 231
Query: 816 LKNNVHGLGNISGERI 863
V L +S ERI
Sbjct: 232 EDVKVGILSKVSKERI 247
>UniRef50_Q2ACT2 Cluster: CBS:Phosphoesterase,
RecJ-like:Polynucleotide adenylyltransferase
region:Phosphoesterase, DHHA1; n=1; Halothermothrix
orenii H 168|Rep: CBS:Phosphoesterase,
RecJ-like:Polynucleotide adenylyltransferase
region:Phosphoesterase, DHHA1 - Halothermothrix orenii H
168
Length = 865
Score = 57.2 bits (132), Expect = 5e-07
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Frame = +3
Query: 228 IVIKVDSPEFKSIFTE---EVIDLKKIFDKY--KHEIRI--AGGAVRDLLMGLTPKDLDF 386
+ IK + +F+ + EV L + + KH++R+ GG VRDL++GL DLDF
Sbjct: 441 VKIKEEKYDFRRVLKRLPGEVYSLLNVIRREADKHDVRVYLVGGMVRDLILGLENNDLDF 500
Query: 387 ATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTD-GRFADV 563
+ + N ++ T R+N N + R ++ T G +V
Sbjct: 501 MVEGNIKYYLRALSRTFEENYTYN-DKFKTGRIRLNSGYNLDFAVARSEVYTSPGALPEV 559
Query: 564 QFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYGYEDLQKR------RVAFVGDPD 713
+ T + D RRD T+N++ +G D G++ D+F G D++ + R +F+ DP
Sbjct: 560 E-TGEIVEDLFRRDFTVNALAIGVDSQNWGTLIDFFGGIHDIEHKKLRVLHRFSFLDDPT 618
Query: 714 VRVKEDYLRIMRYFRFYGRIAL 779
++ L + F F + L
Sbjct: 619 RIIRGLRLALRLGFSFQDKTNL 640
>UniRef50_A4T0E4 Cluster: Polynucleotide adenylyltransferase region;
n=1; Polynucleobacter sp. QLW-P1DMWA-1|Rep:
Polynucleotide adenylyltransferase region -
Polynucleobacter sp. QLW-P1DMWA-1
Length = 376
Score = 57.2 bits (132), Expect = 5e-07
Identities = 62/201 (30%), Positives = 89/201 (44%), Gaps = 13/201 (6%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
+I GGA+RD LM L D+D+ + E EM A+ R + + ++
Sbjct: 2 KIYAVGGAIRDTLMSLPVHDIDYVVVGSSVE--EM-VAKGFRPVGKD------FPVFLHP 52
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKL----DANRRDLTINSMF--LGFDGS----V 647
E R + T + F D + D RRDLTIN+M +G DG+ +
Sbjct: 53 DTQAEYALARTERKTGKGYKGFHFYADPSVTLEQDLERRDLTINAMAQEVGLDGTWIGPI 112
Query: 648 YDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPD-NHEEETLXVLKN 824
D + G EDL + V D ED LR++R RF R P+ + +ET+ LK
Sbjct: 113 LDPYNGQEDLAAKVFRHVSD---AFAEDPLRLLRIARFAARF---PEFSVADETMIALKA 166
Query: 825 NVHG--LGNISGERIWGELKK 881
V L +S ERIW EL +
Sbjct: 167 IVQSGELAALSAERIWQELAR 187
>UniRef50_Q8D2W4 Cluster: CCA-adding enzyme; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
CCA-adding enzyme - Wigglesworthia glossinidia
brevipalpis
Length = 403
Score = 57.2 bits (132), Expect = 5e-07
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATT-ATPEEM-----KEMFTAEEVRMINVNGERHGTITAR 488
+ GGAVRD L+ + K+ D+ +TPEEM K + + V + + E H AR
Sbjct: 5 LVGGAVRDGLLNMPIKEKDWVVVESTPEEMIKLGYKPVGKSFPVFLHPKSHEEHAL--AR 62
Query: 489 INDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGY 668
K + ++ + + T + D RRDLTIN++ +G++ D + G
Sbjct: 63 TERKNGYGYKGFKL-------YTSSKITLEE--DLKRRDLTINAIAKDKNGNLIDPYGGI 113
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNI 848
+DL ++++ + + KED LR++R RF + + +TL ++ + L I
Sbjct: 114 KDLYEKKLKHISN---SFKEDPLRVLRTARFAAYLFHLNFFIDSKTLKIMSEMIDELFFI 170
Query: 849 SGERIWGELKK 881
ERIW E KK
Sbjct: 171 PVERIWLETKK 181
>UniRef50_Q747L5 Cluster: PolyA polymerase; n=4;
Desulfuromonadales|Rep: PolyA polymerase - Geobacter
sulfurreducens
Length = 455
Score = 56.8 bits (131), Expect = 7e-07
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +3
Query: 588 DANRRDLTINSM-FLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFY 764
DA RRD T+N++ + D S+ DY G EDLQ+ + +GDP VR ED +R++R RF
Sbjct: 153 DALRRDFTVNALAYCIADFSIIDYAGGMEDLQRGMIRTIGDPRVRFTEDPVRMLRAVRFA 212
Query: 765 GRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ EEET + + + + R++ E+ K
Sbjct: 213 AVLGFAV---EEETWQAMLDLAPAITRATAPRLYEEMLK 248
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMF 425
+ GG VRDLL+G PKD D AT ATP ++K +F
Sbjct: 40 LVGGCVRDLLLGREPKDFDVATDATPNQIKRIF 72
>UniRef50_Q058D0 Cluster: TRNA nucleotidyltransferase; n=1; Buchnera
aphidicola str. Cc (Cinara cedri)|Rep: TRNA
nucleotidyltransferase - Buchnera aphidicola subsp.
Cinara cedri
Length = 414
Score = 56.8 bits (131), Expect = 7e-07
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGT-ITARIN 494
+I + GGA+RD L+ + +D D+ + KEM ++ G+ I + +
Sbjct: 2 KIYLVGGAIRDRLLNIPVRDRDWVVVGI-RDPKEMLKKNYQQV----GKGFPVFIHPKTH 56
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYED 674
++ + T + + G D K D RRDLTIN++ G + D+F G +D
Sbjct: 57 EEYSLARTEKKNGVGHTGFLFDFSSRITLKEDLKRRDLTINAIAQDSSGKIIDFFNGKKD 116
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK--NNVHGLGNI 848
+QK+ + V +ED LR++R RF ++ ++TL ++K + L +
Sbjct: 117 IQKKILRHV---SYSFQEDPLRVLRIARFAALLSHLGFYIAKKTLSLMKLICSRKELLYL 173
Query: 849 SGERIWGELKK 881
+ ERIW E +K
Sbjct: 174 TPERIWKETQK 184
>UniRef50_A6Q8W0 Cluster: Polynucleotide
adenylyltransferase/metal-dependent phosphohydrolase;
n=1; Sulfurovum sp. NBC37-1|Rep: Polynucleotide
adenylyltransferase/metal-dependent phosphohydrolase -
Sulfurovum sp. (strain NBC37-1)
Length = 485
Score = 56.8 bits (131), Expect = 7e-07
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFAT--TATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+ + GGAVRD++MG KD D T +E++ + + + ++ G+ G + RI
Sbjct: 25 VLLVGGAVRDMVMGQDVKDYDIEVYGLTTLDELESVLS--KFGSVSQVGKHFGIVKLRIG 82
Query: 495 DKE---NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY---DY 656
D E +F T + G ++ D+K A+RRD TIN+ +G++ Y D
Sbjct: 83 DVEYDFSFPRTERKTGRGHTGFEVEIDGMLDFKEAAHRRDFTINA--IGYNIKTYEILDP 140
Query: 657 FYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG 836
F G D++ + + + D ED LR+ R +F R + E T + K V
Sbjct: 141 FGGLNDIRYKILRHIDDS--TFIEDPLRVYRAIQFAARFGF---DVAENTAVLCKQMVAS 195
Query: 837 --LGNISGERIWGELKK 881
L + ERI+ E KK
Sbjct: 196 GVLEELPKERIYEEWKK 212
>UniRef50_A6FG51 Cluster: Putative tRNA nucleotidyltransferase; n=1;
Moritella sp. PE36|Rep: Putative tRNA
nucleotidyltransferase - Moritella sp. PE36
Length = 386
Score = 56.8 bits (131), Expect = 7e-07
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+I + GGAVRD L+ L KD DF ATP EM A+ + + + + N
Sbjct: 2 QIYLVGGAVRDKLLSLPVKDKDFVVVGATPAEM----LAQGYQQVG----KDFPVFLHPN 53
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDAN--RRDLTINSMFLGFDGSVYDYFYGY 668
K+ + + + D L+ + RRDLTIN+M G V D
Sbjct: 54 SKQEYALARTERKSGSGYTGFTCYAAPDVTLEQDLVRRDLTINAMVEDEHGHVIDPLNAR 113
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LG 842
DL R + + + ED LR++R RF R +ETL +++ L
Sbjct: 114 LDLDNRLLRHISE---SFSEDPLRVLRVARFAARFHQLGFTIAKETLTLMQEMTQAGDLA 170
Query: 843 NISGERIWGELKK 881
++ ER+W E++K
Sbjct: 171 ELTPERVWQEVEK 183
>UniRef50_UPI00004993B2 Cluster: tRNA nucleotidyltransferase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: tRNA
nucleotidyltransferase - Entamoeba histolytica HM-1:IMSS
Length = 468
Score = 56.4 bits (130), Expect = 9e-07
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKE-MFTAEEVRMINVNGERH----GTITA 485
IR+ GG VRD L+G D+D T + M+ F+ + IN N + + G I
Sbjct: 33 IRVVGGWVRDKLLGKESHDIDI----TVDNMQSYQFSQYLQKYINENTQHNVSGIGIIHK 88
Query: 486 RINDKENFEVTTLRIDMVTDG----RFADVQFTKDWKL-----DANRRDLTINSMFLGF- 635
+ ++ E TLRID + R +D + K+ DA RRD TIN+MF
Sbjct: 89 NHSAGKHLETATLRIDNIAIDICCLRASDYCDNDEEKIGTPLEDAQRRDFTINAMFYRVN 148
Query: 636 DGSVYDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLX 812
D + D G DL+ R + P + +D R +R RF G++ D E+ +
Sbjct: 149 DDQIEDLTGCGLNDLKSRIIRTPISPKETLHDDPARALRAIRFSGKMGFVLDEELEQEMK 208
Query: 813 VLKNNVHGLGNISGERIWGEL 875
+ +S ER+ EL
Sbjct: 209 TKYIGDKMISGLSRERLGREL 229
>UniRef50_Q5QY23 Cluster: CCA-adding enzyme; n=1; Idiomarina
loihiensis|Rep: CCA-adding enzyme - Idiomarina
loihiensis
Length = 370
Score = 56.4 bits (130), Expect = 9e-07
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEE--MKEMF--TAEEVRMINVNGERHGTITA 485
++ + GGAVRD L+ L + D+ E +K+ F ++ + R A
Sbjct: 2 DVYLVGGAVRDKLLKLPVHERDWVVVGARAEDLLKQGFLQVGKDFPVFLHPSTREEYALA 61
Query: 486 RINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYG 665
R K T+ + D D D RRDLTIN++ DG + D + G
Sbjct: 62 RTERKSGKGHTSFDVFASPDVTLED---------DLARRDLTINAIAQSEDGEIVDPYNG 112
Query: 666 YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK--NNVHGL 839
+D++ R++ V + ED LR++R RF R A EET +L+ + L
Sbjct: 113 VQDIKARKLRHVSE---AFTEDPLRVLRVARFAARFAHLDFTVAEETQQMLQEMSASQEL 169
Query: 840 GNISGERIWGELKK 881
++ ER+W E +K
Sbjct: 170 SHLVPERVWREWEK 183
>UniRef50_O83605 Cluster: Polynucleotide adenylyltransferase; n=1;
Treponema pallidum|Rep: Polynucleotide
adenylyltransferase - Treponema pallidum
Length = 370
Score = 56.0 bits (129), Expect = 1e-06
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+E I GGAVRDL+ G TPKD D T A P ++ +F R + G R +
Sbjct: 48 YETYIVGGAVRDLVAGRTPKDFDIVTGAVPSRIRRLF-----RNSRIIGRRFRIVHVSCG 102
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLG-FDGSVYDYFYGYE 671
+ +EV+T R V +G V + DA RRD ++N+++ V D G
Sbjct: 103 -SQLYEVSTFR-SRVGEG---SVCVPGTLEEDAWRRDFSVNALYYDPLRNVVIDCVGGMV 157
Query: 672 DLQKRRV 692
DL++RRV
Sbjct: 158 DLKRRRV 164
>UniRef50_Q18YC7 Cluster: Polynucleotide adenylyltransferase region;
n=2; Desulfitobacterium hafniense|Rep: Polynucleotide
adenylyltransferase region - Desulfitobacterium
hafniense (strain DCB-2)
Length = 529
Score = 56.0 bits (129), Expect = 1e-06
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
I GG VRD L+ KD+D EE+++ + + G +H T++
Sbjct: 20 IVGGTVRDHLLNRPGKDVDGIIPIPLEELEKHLREWGYHPLKI-GAKHQTLSV------- 71
Query: 507 FEVTTLRIDMVTDGRFADVQFTK-DWKLDANRRDLTINSMFLGF-DGSVYDYFYGYEDLQ 680
F+ G+ D+ F D + DA RRD TIN++F G + D G EDL+
Sbjct: 72 FQ----------QGQRMDINFFDGDLEADALRRDFTINAVFQDARTGELIDPLQGREDLE 121
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
+ + G+P R +ED +RI+R RF + + + EE+T ++ + L +++ ER
Sbjct: 122 NKLLRACGNPWERFREDPVRILRMVRFSVQYGM---DIEEDTFRSAQSLLPELKHVASER 178
Query: 861 IWGEL 875
EL
Sbjct: 179 TSEEL 183
>UniRef50_A7I2S1 Cluster: PolyA polymerase family protein; n=1;
Campylobacter hominis ATCC BAA-381|Rep: PolyA polymerase
family protein - Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
Length = 382
Score = 56.0 bits (129), Expect = 1e-06
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLM--GLT-PKDLDFATTATP 404
++V E K+ L + Y GG+VRD + G++ PKD+D
Sbjct: 1 MQVSKIELKTFQISGFKTLFNVLKNYTKRAYFVGGSVRDFFLFGGMSKPKDIDIEVYDIN 60
Query: 405 EEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRID-MVTDGRFA-DVQFTKD 578
E+ E M+ + + G + + ENF++ R + + G A +V+ D
Sbjct: 61 PEIFEKI------MLGIGAKGVGK-SFFVYKFENFDIALARSENKIGVGHKAFEVEVCND 113
Query: 579 WKLDANRRDLTINSMFLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYF 755
++ RRD +IN++ + F G + D++ G D++ R + V + ED LR++R
Sbjct: 114 ERMAVKRRDFSINAVMINIFTGEICDFYGGVADIRARVLRMVCEK--TFVEDSLRVLRGA 171
Query: 756 RFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+F R LK E+ TL +++ L ++S +RI EL K
Sbjct: 172 QFCARFNLK---IEQNTLKIMQK--IKLDDLSKDRIRDELVK 208
>UniRef50_A4M1Z9 Cluster: Poly(A) polymerase; n=1; Geobacter
bemidjiensis Bem|Rep: Poly(A) polymerase - Geobacter
bemidjiensis Bem
Length = 481
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +3
Query: 588 DANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFY 764
DA RRD T+N++F D S+ D+ G EDL++ + +GDP VR ED +R++R RF
Sbjct: 175 DAVRRDFTVNALFYNIADFSIIDHVGGMEDLKQGLIRTIGDPLVRFTEDPVRMIRAIRFA 234
Query: 765 GRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ N EE T ++ + + R++ E+ K
Sbjct: 235 SMLGF---NIEERTEAAIEELCGTINKATPPRLYEEVLK 270
Score = 47.2 bits (107), Expect = 6e-04
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG VRDLL+G PKD D T ATP ++K+MF R+I G R +D E
Sbjct: 42 LVGGGVRDLLLGREPKDFDVVTDATPAQLKKMF--RNCRLI---GRRFRLAHLHFHD-EI 95
Query: 507 FEVTTLR 527
EV T R
Sbjct: 96 IEVATFR 102
>UniRef50_Q94K06 Cluster: TRNA adenylyltransferase-like protein;
n=5; core eudicotyledons|Rep: TRNA
adenylyltransferase-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 605
Score = 56.0 bits (129), Expect = 1e-06
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFAT-----TATPEEMKEMFTA--EEVR---MINVNGER 467
++R+AGG VRD L+G D+D A + ++ KE ++ EEV+ +I N ++
Sbjct: 109 QLRVAGGWVRDKLLGKESDDIDIAIDNMSGSEFLDKFKEYLSSRDEEVQGDTVIERNPDQ 168
Query: 468 HGTI-TARINDKENF-EVTTLRIDMVTD-GRFADVQFTKDWKLDANRRDLTINSMFLGFD 638
+ TA++ + + + LR + T+ R ++F K DA RRDLTINS+F +
Sbjct: 169 SKHLETAKLRIYDQWIDFVNLRSEEYTENSRIPTMKFGTA-KDDAFRRDLTINSLFYNIN 227
Query: 639 -GSVYDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLX 812
G+V D G +DL+ ++ +D LR++R RF R D +E
Sbjct: 228 SGAVEDLTERGIDDLKSGKIVTPLPAKATFLDDPLRVLRAVRFGARFGFTLDEELKEAAS 287
Query: 813 VLKNNVHGLGNISGERIWGEL 875
+ V IS ERI E+
Sbjct: 288 SEEVRVALGEKISRERIGNEI 308
>UniRef50_Q7SAL9 Cluster: Putative uncharacterized protein
NCU08022.1; n=5; Pezizomycotina|Rep: Putative
uncharacterized protein NCU08022.1 - Neurospora crassa
Length = 599
Score = 56.0 bits (129), Expect = 1e-06
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Frame = +3
Query: 321 IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERH-------GTI 479
+R AGG VRD L+G D+D A E + + + ERH G +
Sbjct: 112 LRWAGGWVRDKLLGTESNDIDVAINNMTGEAFALRLRDYCDADPAHRERHSIGPADVGNL 171
Query: 480 --TARINDK-ENFEVTTLR-----IDMVT--------DGRFADVQFTKDWKLDANRRDLT 611
AR DK ++ E TT++ +D+V D R V+F + DA RRD T
Sbjct: 172 HKIARNPDKSKHLETTTIKLFGLDVDLVNLRKETYTEDSRHPQVEFGTA-EEDALRRDAT 230
Query: 612 INSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPD 788
+N++F G V D+ G +D++++ + +P +D LR++R RF R+ D
Sbjct: 231 VNALFYNLHTGKVEDFTGGMKDMERKLIRTPLEPLQTFMDDPLRVLRLIRFACRLGFTID 290
Query: 789 NHEEETLXVLKNN--VHGLG-NISGERIWGELKK 881
EET V+ + + L IS ER+ EL+K
Sbjct: 291 ---EETKAVMGDERVLEALKLKISRERVGVELEK 321
>UniRef50_A0L904 Cluster: Polynucleotide adenylyltransferase region;
n=1; Magnetococcus sp. MC-1|Rep: Polynucleotide
adenylyltransferase region - Magnetococcus sp. (strain
MC-1)
Length = 393
Score = 55.6 bits (128), Expect = 2e-06
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENF 509
GG+VRD L+G P+D D+ A PE+++++ + V + + +E
Sbjct: 23 GGSVRDRLLGQRPRDQDWVVVGACPEQLQQLGYKKVGADFPVFLHPYTQEEYALARRERK 82
Query: 510 EVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRR 689
+ G + T + D RRDLTIN+M DG + D + G +DLQ R
Sbjct: 83 QGCGYL------GFAVEAPPTVTLEQDLARRDLTINAMARTLDGQLIDPYGGVQDLQNRT 136
Query: 690 VAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNV-HG-LGNISGERI 863
+ V ED LR++R R R+A + T + + V G LG++ ER+
Sbjct: 137 LRHV---TAAFAEDPLRVLRVARLLARLAPMGFAVDPATERLCRQLVAQGELGHVCPERV 193
Query: 864 WGELKK 881
W E +K
Sbjct: 194 WRESQK 199
>UniRef50_UPI0000DAE580 Cluster: hypothetical protein
Rgryl_01000652; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000652 - Rickettsiella
grylli
Length = 405
Score = 55.2 bits (127), Expect = 2e-06
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
EI + GGAVRD L+G K+ D+ A+P EM + + R+I + + + +
Sbjct: 8 EIYLVGGAVRDQLLGFPIKERDYVVVGASPAEMLK----QGFRLIGKDFPVF--LHPQTH 61
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYED 674
++ T +I G + D RRDLTIN++ +G + D F G +D
Sbjct: 62 EEYALARTERKIGPGYKGFSCYAAPDVTLEEDLKRRDLTINALAQTNNGEIIDPFQGQKD 121
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISG 854
++ + + V ED +RI+R RF R + +ET+ ++K V +G +
Sbjct: 122 IENKLLRHVSP---AFSEDPVRILRVARFMARFSSFGFRVAKETMALMKMMV-SMGEVHA 177
Query: 855 ---ERIWGE 872
ER+W E
Sbjct: 178 LVPERVWQE 186
>UniRef50_Q6ASD5 Cluster: Related to poly(A) polymerase; n=1;
Desulfotalea psychrophila|Rep: Related to poly(A)
polymerase - Desulfotalea psychrophila
Length = 882
Score = 55.2 bits (127), Expect = 2e-06
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 5/207 (2%)
Frame = +3
Query: 168 PSRRRFRSKMDLNLKCRE-NPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAV 344
P+ R+ SKM L K + N ++ + SPE ++ E + ++ D+ + GG V
Sbjct: 434 PNDRQSGSKMPLPTKRKNLNNLIHETLSPEIITLLQE----VGELADEIGFKAFAVGGFV 489
Query: 345 RDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTL 524
RDLL+ DLD + AE + E+ T T + + ++ T
Sbjct: 490 RDLLLKTANLDLDIVVEGNGIAFAKK-VAEHFKGKFFPHEKFLTATVTLPNDFKIDIATA 548
Query: 525 RIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYGYEDLQKRRV 692
R++ + KLD +RRD +IN+M L + G++ DYF DL+ + +
Sbjct: 549 RLEYYESPAAMPMIQLSSIKLDLSRRDFSINAMALQINREQFGTLIDYFNSQSDLRNQVI 608
Query: 693 AFVGDPDVRVKEDYLRIMRYFRFYGRI 773
+ ++ ED RI R RF R+
Sbjct: 609 RVL--HNLSFVEDPSRIFRAIRFEKRM 633
>UniRef50_A4B002 Cluster: TRNA nucleotidyltransferase; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: TRNA
nucleotidyltransferase - Alteromonas macleodii 'Deep
ecotype'
Length = 397
Score = 55.2 bits (127), Expect = 2e-06
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 4/192 (2%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM-KEMFTAEEVRMINVNGERHGTITARI 491
++ + GGAVRD L+ + D+ ATP+EM + FT V + + +
Sbjct: 2 QVYLVGGAVRDALLNRKVIERDYVVVGATPQEMLSQGFT-------QVGKDFPVFLHPKT 54
Query: 492 NDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYE 671
++ T + G D + + D RRDLT+N++ G++ D + G +
Sbjct: 55 QEEYALARTERKSGKGYTGFVCDASSSVTLEEDLLRRDLTVNAIAQDNLGNLIDPYGGKK 114
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGN 845
DL+ + V + ED LR+ R RF R A ET+ ++++ L
Sbjct: 115 DLENHLLRHVSE---AFSEDPLRVFRVARFATRYAYLGFTIANETMALMQSMAESGELST 171
Query: 846 ISGERIWGELKK 881
+S ER+W E K+
Sbjct: 172 LSAERVWQETKR 183
>UniRef50_Q60CQ4 Cluster: Multifunctional CCA protein [Includes:
CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)]; n=192; cellular organisms|Rep:
Multifunctional CCA protein [Includes: CCA-adding enzyme
(EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)] - Methylococcus capsulatus
Length = 425
Score = 55.2 bits (127), Expect = 2e-06
Identities = 55/189 (29%), Positives = 76/189 (40%), Gaps = 4/189 (2%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GGAVRD L+GL ++ D+ E E A R + R + E
Sbjct: 5 LVGGAVRDRLLGLPVRERDWVVVG---ESPETMIARGFRPVG----RDFPVFLHPETHEE 57
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKL--DANRRDLTINSMFLGFDGSVYDYFYGYEDLQ 680
+ + R V D L D RRDLTIN+M DG + D F G DL+
Sbjct: 58 YALARTERKTAPGYRGFVVHAAPDVTLEQDLERRDLTINAMAETPDGRLVDPFGGRRDLE 117
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGNISG 854
R + V ED +RI+R RF R+ ETL ++ V + +
Sbjct: 118 ARLLRHVSS---AFAEDPVRILRVARFTARLTPLGFRVAPETLVEMRRMVEAGEVDALVP 174
Query: 855 ERIWGELKK 881
ER+W E K
Sbjct: 175 ERVWAEFAK 183
>UniRef50_Q8R5U9 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase; n=1; Thermoanaerobacter tengcongensis|Rep:
TRNA nucleotidyltransferase/poly(A) polymerase -
Thermoanaerobacter tengcongensis
Length = 466
Score = 54.8 bits (126), Expect = 3e-06
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Frame = +3
Query: 315 HEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+ + I GG +RD ++ KD DF EE+ ++ AE++ G+ +
Sbjct: 16 YNVYIVGGYIRDRILNKEAKDYDFVVKGNAEEIAKL-AAEKM---------GGSFVPFMA 65
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGF-DGSVYDY----F 659
+K + + D + D F +++ KD D RD TIN+M + D ++Y F
Sbjct: 66 EKGTYRIVV--GDEILD--FTNLR-GKDIYEDLAHRDFTINAMAIRLTDHFEFEYIIDPF 120
Query: 660 YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGL 839
G +D++ R++ V D R ED LR +R RF D E T +K H L
Sbjct: 121 GGLKDIKNRKIRHVADYTFR--EDPLRALRAVRFAATYKFDID---EATKAKIKEEAHLL 175
Query: 840 GNISGERIWGEL 875
N++ ERI E+
Sbjct: 176 KNVAPERIMNEI 187
>UniRef50_Q30UP5 Cluster: Polynucleotide adenylyltransferase region;
n=1; Thiomicrospira denitrificans ATCC 33889|Rep:
Polynucleotide adenylyltransferase region -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 411
Score = 54.8 bits (126), Expect = 3e-06
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Frame = +3
Query: 282 IDLKKIFDKY-KHEIR--IAGGAVRDLLMGLTPKDLDFAT--TATPEEMKEMFTAEEVRM 446
I L IF+K H I I GG +RD L+ L KD+D ++ E ++E+ EE
Sbjct: 6 IALDAIFNKLIMHNITPIIVGGFIRDSLLFLESKDIDIEVYGVSSFEILEEIL--EEFGK 63
Query: 447 INVNGERHGTITAR-INDKENFEVTTLRIDMVTDGRFADVQ--FTKDWKLDANRRDLTIN 617
IN+ G+ G + +F + + + + R +V+ + D+K +RRD TIN
Sbjct: 64 INIVGKSFGVCKLMFVGYDLDFSLPRMDNKISSGHRGFNVKTYYKLDFKTATSRRDFTIN 123
Query: 618 SMFLGFD---GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPD 788
S +G+D + D FYG +DL+ + + V +D LR++R +F R L +
Sbjct: 124 S--IGYDVVSKKLLDPFYGIDDLKNKILRAVNLES--FAQDPLRVLRAAQFCARFNLSIE 179
Query: 789 NHEEETLXVLKNNVHGLGNISGERIWGELKK 881
+ T + ++ L + ER++ E KK
Sbjct: 180 YNLAITCKEMVSHAL-LAQLPKERVFEEFKK 209
>UniRef50_A4J0V4 Cluster: Metal dependent phosphohydrolase; n=1;
Desulfotomaculum reducens MI-1|Rep: Metal dependent
phosphohydrolase - Desulfotomaculum reducens MI-1
Length = 472
Score = 54.8 bits (126), Expect = 3e-06
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAE-EVRMINVNGERHGTITARINDKE 503
+ GGAVRDL + P DLDF TA + + T + + ++ ++ +R + + +
Sbjct: 17 LVGGAVRDLFLNKIPVDLDFCVTAKVFALAQTLTQQYQGSLVTLDDQRE--MLRVVTNSW 74
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQK 683
+ + + LR +++ FA +D+ L+A +++ + + D G DL+K
Sbjct: 75 HLDFSPLRDEILEKDLFA-----RDFTLNAMALPVSMGINKYNWQNQIQDPTGGKGDLKK 129
Query: 684 RRVAFVGDPDVRVKEDYLRIMRYFRFYG--RIALKPDNHEEETLXVLKNNVHGLGNISGE 857
+ +++D LR +R RF +A+ P ET+ +L+ + I+GE
Sbjct: 130 GLLRAASSSS--IQQDPLRSLRGIRFAATYNLAIIP-----ETMVLLRQGTRRIEQIAGE 182
Query: 858 RIWGEL 875
R+W EL
Sbjct: 183 RLWHEL 188
>UniRef50_Q5AME1 Cluster: Potential tRNA CCA-pyrophosphorylase; n=3;
Saccharomycetales|Rep: Potential tRNA
CCA-pyrophosphorylase - Candida albicans (Yeast)
Length = 547
Score = 54.8 bits (126), Expect = 3e-06
Identities = 66/209 (31%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEM-----------KEMFTAEEVRMINVNG 461
E+RI GG VRD L+G D+D A T EE + + V I +N
Sbjct: 54 ELRITGGWVRDKLLGNESHDIDIAVNHLTGEEFVNGLHDYLRQHEPELSMNHVHTIKMNP 113
Query: 462 ERH---GTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMFL 629
E+ T T ++ + + LR + T D R ++F + DA RRD T+N++F
Sbjct: 114 EKSKHLETCTTKLFGVD-IDFVNLRSEEYTHDSRVPSIEFGTP-EQDAVRRDATLNALFY 171
Query: 630 GFD-GSVYDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEE 803
+ G + DY G DLQ + P +D LRI+R RF + E E
Sbjct: 172 NLNQGEIEDYTKRGLSDLQNGILKTPLAPIKTFLDDPLRIIRLIRFASKFNFVV---ESE 228
Query: 804 TLXVLK--NNVHGLG-NISGERIWGELKK 881
TL +K +N L IS ERI EL+K
Sbjct: 229 TLNAMKEEHNKSALSTKISKERIEIELRK 257
>UniRef50_Q820V9 Cluster: CCA-adding enzyme; n=2; Coxiella
burnetii|Rep: CCA-adding enzyme - Coxiella burnetii
Length = 376
Score = 54.8 bits (126), Expect = 3e-06
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
++ + GGAVRD L+GL K+ D+ ATPEEM TA + + + +
Sbjct: 17 KVYLVGGAVRDQLLGLPVKEKDWVVVGATPEEM----TARGFKPVG----KEFPVFLHPE 68
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKL--DANRRDLTINSMFLGFDGSVYDYFYGY 668
E + + + + D L D RRDLTIN++ +G + D + G
Sbjct: 69 THEEYALARTERKVAKGYKGFTFYAAPDVSLEEDLKRRDLTINAIAETPEGQLIDPYGGQ 128
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALK-PD-NHEEETLXVLKNNVHG-- 836
EDL+ + + V V +ED +R++R R+A K PD + +TL ++K V
Sbjct: 129 EDLKNKVLRHV---SVAFQEDPVRVLR----LARLATKFPDFSIHPDTLELMKKMVCAGE 181
Query: 837 LGNISGERIWGELKK 881
+ + ERIW EL +
Sbjct: 182 IDALVPERIWQELNR 196
>UniRef50_Q63YC3 Cluster: Multifunctional CCA protein [Includes:
CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)]; n=33; Bacteria|Rep: Multifunctional CCA
protein [Includes: CCA-adding enzyme (EC 2.7.7.25) (EC
2.7.7.21) (tRNA nucleotidyltransferase) (tRNA
adenylyl-/cytidylyl- transferase) (tRNA
CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC
3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-);
Phosphatase (EC 3.1.3.-)] - Burkholderia pseudomallei
(Pseudomonas pseudomallei)
Length = 413
Score = 54.8 bits (126), Expect = 3e-06
Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
+I GGA+RD L+GL +D D+ ATPE+M A+ R + + ++
Sbjct: 2 KIYAVGGAIRDALLGLPVRDRDYVVVGATPEQM----AAQRFRPVGKD------FPVFLH 51
Query: 495 DKENFEVTTLRIDMVTDGRFADVQF--TKDWKLDAN--RRDLTINSMF--LGFDGS---- 644
+ E R + T + QF D L+ + RRDLTIN+M + DG+
Sbjct: 52 PDTHEEYALARTERKTAAGYHGFQFYYAPDVTLEQDLVRRDLTINAMAREVSPDGALVGP 111
Query: 645 VYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKN 824
V D F G DL+ + VGD V LR+ R+ + A+ PD V
Sbjct: 112 VVDPFGGQADLRAKLFRHVGDAFVEDPVRILRVARFAARFAEFAVAPDTAALMRAMVDAG 171
Query: 825 NVHGLGNISGERIWGELKK 881
V L ER+W EL +
Sbjct: 172 EVDAL---VPERVWQELAR 187
>UniRef50_UPI0000E0E587 Cluster: tRNA nucleotidyltransferase; n=1;
alpha proteobacterium HTCC2255|Rep: tRNA
nucleotidyltransferase - alpha proteobacterium HTCC2255
Length = 378
Score = 54.4 bits (125), Expect = 4e-06
Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 7/189 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 503
+ GGAVRD L+ KD D+ A+PE++ A + + + ++ +
Sbjct: 5 LVGGAVRDTLLKRRIKDRDYVVVGASPEQL----VALGYKPVGKD------FPVFLHPET 54
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKL----DANRRDLTINSMFLGFDGSVYDYFYGYE 671
E R++ + F D + D +RRDLTIN+M + G++ D F G
Sbjct: 55 QEEYALARVERKVGLGYGGFSFVTDATVTLEEDLSRRDLTINAMAMDDQGNIIDPFNGQA 114
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGN 845
DL R V V ED LR++R RF R ET+ ++K H L
Sbjct: 115 DLAHRIFKHVSPAFV---EDPLRVLRIARFMARYHQYGFTIAPETVELMKKIGHSGELAA 171
Query: 846 ISGERIWGE 872
+S R+W E
Sbjct: 172 LSAPRVWQE 180
>UniRef50_A0Z6Y3 Cluster: TRNA nucleotidyltransferase, putative;
n=1; marine gamma proteobacterium HTCC2080|Rep: TRNA
nucleotidyltransferase, putative - marine gamma
proteobacterium HTCC2080
Length = 372
Score = 54.4 bits (125), Expect = 4e-06
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +3
Query: 588 DANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYG 767
D RRDLTIN+M + DG + D + G DL+ + + V V ED LR++R RF
Sbjct: 87 DLTRRDLTINAMAMDDDGVLVDPYGGKRDLEAKCLRHVSPHFV---EDPLRVLRVARFAA 143
Query: 768 RIALKPDNHEEETLXVLKNNV-HG-LGNISGERIWGELKK 881
R EETL ++ V G LG+++ ERIW E ++
Sbjct: 144 RYYALGFTVAEETLDLMSTIVAQGELGHLATERIWVETER 183
>UniRef50_UPI0000DAE6D1 Cluster: hypothetical protein
Rgryl_01001009; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01001009 - Rickettsiella
grylli
Length = 308
Score = 54.0 bits (124), Expect = 5e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +3
Query: 588 DANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFY 764
DA RRD T+N+++ D S+ DY G D+ + V +G+P +R +ED +R++R RF
Sbjct: 14 DAWRRDFTLNALYYNIADFSLVDYCGGLADIHNKIVRIIGEPRLRYQEDPVRLLRAIRFA 73
Query: 765 GRIALKPDNHEEETL 809
G++ + D E +
Sbjct: 74 GKLNFQLDKATAEPI 88
>UniRef50_Q3ZZE1 Cluster: PolyA polymerase family protein; n=3;
Dehalococcoides|Rep: PolyA polymerase family protein -
Dehalococcoides sp. (strain CBDB1)
Length = 418
Score = 54.0 bits (124), Expect = 5e-06
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG VRD L+ TPKD D A + + E R ++A IN +
Sbjct: 38 LVGGLVRDFLLNKTPKDADLVLAANAIKFGQGL-LEGFNYKATLHPRFNNLSADINGFK- 95
Query: 507 FEVTTLRIDMVTD-GRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYGYE 671
+++T R + D G+ +V D K D RRD IN+M L G + D + G
Sbjct: 96 LDISTARNEFYPDPGKLPEV-LEGDIKADLFRRDFKINAMALSLSPQDFGCLVDPYNGLT 154
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNIS 851
DL++ +++ + R +D RI R R+ R+ + ETL +L+ + + I
Sbjct: 155 DLKQHKLSVLHPKSFR--DDPSRIWRALRYSERLGF---DISSETLTLLQRDAQLIPLIG 209
Query: 852 GERIWGELK 878
+R+ E++
Sbjct: 210 ADRLRYEME 218
>UniRef50_A5EXT8 Cluster: TRNA nucleotidyltransferase; n=1;
Dichelobacter nodosus VCS1703A|Rep: TRNA
nucleotidyltransferase - Dichelobacter nodosus (strain
VCS1703A)
Length = 357
Score = 54.0 bits (124), Expect = 5e-06
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GGAVRD L+GL D D+ E + A R + R + E
Sbjct: 5 LVGGAVRDRLLGLDGSDRDWVVIG---ETMDSMRARGFRQVG----RDFPVFLHPETGEE 57
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKLDAN--RRDLTINSMFLGFDGSVYDYFYGYEDLQ 680
+ + + + + F ++ L+ + RRDLTIN+M +G + D + G D+Q
Sbjct: 58 YALARIERKIARGHQGFCFDFHQNITLEEDLIRRDLTINAMAEDENGQLIDPYGGSADIQ 117
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGNISG 854
+ + V ED LR++R RF+ R A ETL + L ++
Sbjct: 118 AKILRHVSP---AFSEDPLRVLRLMRFWARFAHLGFTIAPETLQLCGEMARSGELQTLTA 174
Query: 855 ERIWGELKK 881
ER+W E +K
Sbjct: 175 ERVWQECEK 183
>UniRef50_UPI0000499291 Cluster: tRNA nucleotidyltransferase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: tRNA
nucleotidyltransferase - Entamoeba histolytica HM-1:IMSS
Length = 484
Score = 53.6 bits (123), Expect = 6e-06
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 14/236 (5%)
Frame = +3
Query: 210 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 389
+C+ I I++ E +IF +V++ K + +R+ GG VRD ++ D+D
Sbjct: 4 ECKTYNIPIELTQQEI-NIF--KVLNNTKQYFNLSCTVRVVGGWVRDKILKKNSHDIDIT 60
Query: 390 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 569
+ + + +++ +N + +T R + TT ++ D +
Sbjct: 61 SEGISGVQFAQYVTQYLQLQGINTK---LLTNREQTEHLQTATTTICELPIDFGSPRAEE 117
Query: 570 TKDWKL-----------DANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPD 713
KD D RRD TIN +F DG + DY GYEDL + + DP
Sbjct: 118 YKDNSRIPEIRKGSIYEDCIRRDFTINCLFYRIEDGMIEDYTNGYEDLVNKIIRTPIDPI 177
Query: 714 VRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNN--VHGLGNISGERIWGEL 875
+D LR+ R RF + K E+ TL + N + G+ I R EL
Sbjct: 178 QSFTDDPLRVFRGIRFSAKYGFK---IEDNTLNAMTNPTVLRGMNKIKKSRRTPEL 230
>UniRef50_Q7NKM4 Cluster: Gll1453 protein; n=1; Gloeobacter
violaceus|Rep: Gll1453 protein - Gloeobacter violaceus
Length = 582
Score = 53.6 bits (123), Expect = 6e-06
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEE------MKEMFTAEEVRMINVNGERHGTITAR 488
+ GGAVRDLL+G T DLD E + AE+ + E++ T
Sbjct: 190 LVGGAVRDLLLGETSSDLDVVVEGRGGEAGAAPALARAIAAEDATLRLECFEKYQTAALI 249
Query: 489 INDKENFEVTTLRIDMV-TDGRFADVQFTKDWKLDANRRDLTINSMFLGFDG----SVYD 653
D ++ T R + G +V+ + +LD RRD TIN+M + +G + D
Sbjct: 250 WPDGFVLDLATARTEFYPRPGANPEVE-SASIRLDLYRRDFTINAMAVCLNGPRAWQLID 308
Query: 654 YFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI--ALKPDNHEEETLXVLKNN 827
+F G+ DL + R+ V P+ + ED RI R RF R+ A+ P E + +
Sbjct: 309 FFGGFVDL-RERIVRVLHPNSFI-EDPTRIFRAVRFALRLGFAIAPQT-EAFIVRSVSGG 365
Query: 828 VHGLGNISGERIWGEL 875
+H L GER+ EL
Sbjct: 366 LHDL--YGGERLKTEL 379
>UniRef50_Q39TB4 Cluster: Polynucleotide adenylyltransferase region;
n=1; Geobacter metallireducens GS-15|Rep: Polynucleotide
adenylyltransferase region - Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210)
Length = 431
Score = 53.6 bits (123), Expect = 6e-06
Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG +RDLLMG D+D A PE + F E + G +R+ K
Sbjct: 30 VVGGCLRDLLMGRGVNDVDIAVGGGPEALSRRFAKECGGTFFWLDQERGH--SRVVIKGG 87
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSV--YDYFYGYEDLQ 680
+ T FA ++ +D D RD TINS+ + G V +D G D++
Sbjct: 88 AGIDTFD--------FAPLR-GEDICADLALRDFTINSLAVPLQGGVELFDPLKGETDIR 138
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGER 860
+ V + R +D LR++R FRF + + E ETL + + + N +GER
Sbjct: 139 AQLVRRCAESVFR--DDPLRLVRAFRFAATLGFRI---ETETLAAITTHAPLIANSAGER 193
Query: 861 IWGEL 875
I EL
Sbjct: 194 IRDEL 198
>UniRef50_Q1NKC6 Cluster: CBS:Phosphoesterase,
RecJ-like:Polynucleotide adenylyltransferase
region:Phosphoesterase, DHHA1; n=3; delta proteobacterium
MLMS-1|Rep: CBS:Phosphoesterase, RecJ-like:Polynucleotide
adenylyltransferase region:Phosphoesterase, DHHA1 - delta
proteobacterium MLMS-1
Length = 881
Score = 53.6 bits (123), Expect = 6e-06
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 5/187 (2%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 512
GG VRDLL+ DLD + + ++ ++ T ++ D +
Sbjct: 488 GGFVRDLLLQEKNFDLDLVVEGDGVRFADALARRLGGRVRIH-KKFKTAVVKLPDGRKID 546
Query: 513 VTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYGYEDLQ 680
V T R++ KLD RRD +IN++ + + G++ D+F G DL+
Sbjct: 547 VATARLEYYDYPAALPTVELSSLKLDLYRRDFSINALAIDVNPETFGTLVDFFNGQNDLK 606
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL-XVLKNNVHGLGNISGE 857
+++ + ++ ED RI R RF R+ H E + ++ N++ G G
Sbjct: 607 DKKLRVL--HNLSFVEDPTRIFRAIRFEQRMGFSIGRHTERLIKNAVRMNLYDRG--YGY 662
Query: 858 RIWGELK 878
R + EL+
Sbjct: 663 RFYNELR 669
>UniRef50_A7T930 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 508
Score = 53.6 bits (123), Expect = 6e-06
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +3
Query: 588 DANRRDLTINSMFLGFD----GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYF 755
D NRRD TIN++ L + G + D F G DLQ + + +P++ +D LR+MR
Sbjct: 154 DQNRRDFTINALALSLNKKDFGLLLDPFDGINDLQSKIIRTPLEPNITYSDDPLRMMRAI 213
Query: 756 RFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
RF ++ E+E+L + N L I+ ERI EL K
Sbjct: 214 RFASQLNF---IIEKESLEAISKNAERLKIITRERIVEELNK 252
>UniRef50_Q6LV05 Cluster: Multifunctional CCA protein [Includes:
CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT);
2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic
phosphodiesterase (EC 3.1.4.-); Phosphatase (EC
3.1.3.-)]; n=6; Gammaproteobacteria|Rep: Multifunctional
CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.25)
(EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA
adenylyl-/cytidylyl- transferase) (tRNA
CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC
3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-);
Phosphatase (EC 3.1.3.-)] - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 411
Score = 53.6 bits (123), Expect = 6e-06
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 7/192 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARINDKE 503
+ GGAVRD L+GL D D+ ATPE+M A+ + + ++ K
Sbjct: 5 LVGGAVRDALLGLKVVDKDWMVVGATPEQM----LAQGYEQVGSD------FPVFLHPKT 54
Query: 504 NFEVTTLRIDMVTDGRFADV--QFTKDWKL--DANRRDLTINSMFLGFDGSVYDYFYGYE 671
E R + + + D L D RRDLTIN++ DG + D + G +
Sbjct: 55 KQEYALARTERKSGKGYTGFICYSAPDVTLEQDLMRRDLTINAIAQEKDGRLIDPYNGQQ 114
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGN 845
DL + + V V ED LR++R RF R A ET+ +++ V L
Sbjct: 115 DLDNKILRHVSPAFV---EDPLRVLRVARFSARFAHLGFTIAPETIALMQEMVVAGELEA 171
Query: 846 ISGERIWGELKK 881
++ ER+W E +K
Sbjct: 172 LTPERVWKEWEK 183
>UniRef50_Q7M883 Cluster: RNA NUCLEOTIDYLTRANSFERASE; n=1; Wolinella
succinogenes|Rep: RNA NUCLEOTIDYLTRANSFERASE - Wolinella
succinogenes
Length = 379
Score = 53.2 bits (122), Expect = 8e-06
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Frame = +3
Query: 285 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGE 464
+L + F + ++ GG+VRD + KDLD + E + + G
Sbjct: 20 ELLEFFKPHGAKVYAVGGSVRDFHLRRPLKDLDLEIHQITPALFESL----MERLGAKGV 75
Query: 465 RHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD-G 641
+ + + + L R +V+ K A RRD TIN++ L + G
Sbjct: 76 GKSFFVYKWQEID-LSLPRLETKTALGHRGFEVKLASSPKEAAKRRDFTINALMLELESG 134
Query: 642 SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK 821
++D+F G +DL++RR+ + P +ED LR++R RF + + + + ++
Sbjct: 135 ELFDFFGGMDDLKRRRLHII-SPQT-FQEDSLRVLRAARFASELGFRIAPEDIPLMRSIE 192
Query: 822 NNVHGLGNISGERIWGELKK 881
+ ++S ERI+ E K+
Sbjct: 193 -----VDDLSKERIYHETKR 207
>UniRef50_Q2LR14 Cluster: TRNA nucleotidyltransferase; n=1; Syntrophus
aciditrophicus SB|Rep: TRNA nucleotidyltransferase -
Syntrophus aciditrophicus (strain SB)
Length = 875
Score = 53.2 bits (122), Expect = 8e-06
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG VRD++M + D+D + ++ + E++ T R+
Sbjct: 480 LVGGIVRDMVMRIENLDVDLVVEGDGIIFAKALAEAFGGKVSPH-EKYKTAVVRLPGGRR 538
Query: 507 FEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYGYE 671
++ T R++ G F +V+ KLD RRD TIN+M + + G + D+F
Sbjct: 539 IDLATARLEYYRMPGAFPEVE-ESTLKLDLYRRDFTINTMAVALNPHRFGELIDFFGAQR 597
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGN 845
D++++++ + + ED RI+R RF R ++T+ ++ + V L N
Sbjct: 598 DIREKKIRVL--HSLSFVEDPSRILRAVRFEKRFNFCLG---KQTVSLISSAVQAGFLRN 652
Query: 846 ISGERIWGELKK 881
I G RI+ E+++
Sbjct: 653 IPGRRIFHEMRQ 664
>UniRef50_A2GDE2 Cluster: PolyA polymerase family protein; n=1;
Trichomonas vaginalis G3|Rep: PolyA polymerase family
protein - Trichomonas vaginalis G3
Length = 450
Score = 53.2 bits (122), Expect = 8e-06
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 13/177 (7%)
Frame = +3
Query: 288 LKKIFDKYKHEI--RIAGGAVRDLLMGLTPKDLDFATTATP--EEMKEMFTAEEVRMI-- 449
L+ + + + H + R+AGG VRD L+ KD D E + T E + I
Sbjct: 24 LEYVCNSFDHPVVARLAGGWVRDKLIDKESKDYDVTLEGCTGVEFANNLCTYLESKSIEH 83
Query: 450 ----NVNGERH-GTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLT 611
N + +H + + + + ++LR + D R V+ + DA RRD T
Sbjct: 84 RVIRNPDQSKHLSSAKVCLFGEVWIDFSSLRSEKYKEDSRIPIVEEGTPLQ-DAERRDFT 142
Query: 612 INSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIAL 779
IN+++ V D+F GY+DLQ + + D V +ED LRI+R RF R L
Sbjct: 143 INTLYYNICTKKVEDFFNGYQDLQNKILRTPKDSLVSFQEDPLRILRALRFASRFNL 199
>UniRef50_Q7MW45 Cluster: PolyA polymerase family protein; n=19;
Bacteroidetes|Rep: PolyA polymerase family protein -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 483
Score = 52.8 bits (121), Expect = 1e-05
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 9/227 (3%)
Frame = +3
Query: 228 IVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPE 407
I+ K+D P F+ I ++ D+ E + GG VRD+ + KD+D
Sbjct: 7 ILSKIDIPIFRLI--------AEVADQLGLETYVVGGYVRDIFLNRPSKDIDIVAVGRGI 58
Query: 408 EMKEMFTAEEVRMINVN-GERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWK 584
++ + + R +++ GT + D E V + D R V+ +
Sbjct: 59 DLAKAVAKKLGRKAHLSVFANFGTAQVKHGDLEIEFVGARKESYRHDSRKPIVE-DGTLE 117
Query: 585 LDANRRDLTINSMFLGFD----GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRY 752
D RRD TIN++ + + G + D F G D+ + DPD+ +D LR+MR
Sbjct: 118 DDLRRRDFTINALAVCLNSDRFGDLVDMFDGLCDMDDMLLCTPLDPDITFSDDPLRMMRA 177
Query: 753 FRFYGRI---ALKPDNHEEETLXVLKNNVHGLGN-ISGERIWGELKK 881
RF ++ + P + E ++ N H + +S ER+ EL K
Sbjct: 178 IRFASQLPGFTILPRDFE-----AIQRNAHRIKEAVSAERVIEELNK 219
>UniRef50_Q3EZB5 Cluster: TRNA nucleotidyltransferase; n=1; Bacillus
thuringiensis serovar israelensis ATCC 35646|Rep: TRNA
nucleotidyltransferase - Bacillus thuringiensis serovar
israelensis ATCC 35646
Length = 510
Score = 52.8 bits (121), Expect = 1e-05
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Frame = +3
Query: 282 IDLKKIFDKYKH---EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN 452
++L KI + K ++ + GGAVRDLL+ + PKD D+ T +E E +
Sbjct: 4 VELTKIVETLKTCNAKVYLVGGAVRDLLLDIVPKDKDYCVTGISQEGFESLFPTAM---- 59
Query: 453 VNGERHGTITARINDKENFEVTTLRID-MVTDGRFADVQF-TKDWKL--DANRRDLTINS 620
+ G+ I D E EV R + V++G V + + D + D RRD+TINS
Sbjct: 60 LQGKDFPVYRMDI-DGELCEVALARKERKVSEGHNGFVIYASPDITIEDDLARRDITINS 118
Query: 621 MFLGFD-GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHE 797
M + + + D FYG DL+ + + ED LR+ R RF +
Sbjct: 119 MAIDLETNKLIDPFYGELDLRTETIRATTE---AFCEDPLRVYRAARFAAEYGFFIEYKT 175
Query: 798 EETLXVLKNNVHGLGNISGERIWGELKK 881
+ LK+ L ++ ER+ E KK
Sbjct: 176 STMMNQLKSE---LLSLPIERVLEETKK 200
>UniRef50_A6GB74 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative uncharacterized
protein - Plesiocystis pacifica SIR-1
Length = 853
Score = 52.8 bits (121), Expect = 1e-05
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIN---- 494
I GGA RD+L GL P D+DFA+T + + + N + + R N
Sbjct: 625 IVGGATRDILRGLNPADIDFASTMPAIDSFNAIVEQGLARKNADPNDPNDLAIRRNVPFG 684
Query: 495 --DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGS--VYDYFY 662
E T L I DG A ++ LDA RD TIN+++ DG V
Sbjct: 685 SVQVEADIETGLDIISTHDGHDASLRL----DLDALARDFTINAVYYDIDGDALVDPTGT 740
Query: 663 GYEDLQKRRVAFV-GDPDVRVKEDYLRIMRYFRFYGR 770
G DL + FV G PD + + + + R+ R G+
Sbjct: 741 GLADLASSTLRFVAGTPDEVLGAEPVMVARWMRMIGK 777
>UniRef50_A4M1Z2 Cluster: Metal dependent phosphohydrolase; n=1;
Geobacter bemidjiensis Bem|Rep: Metal dependent
phosphohydrolase - Geobacter bemidjiensis Bem
Length = 399
Score = 52.8 bits (121), Expect = 1e-05
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Frame = +3
Query: 279 VIDLKKIFDKYKHE-IRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINV 455
++ LKK F H I + GG VRD L+G+ +D+D A T E+ + R++
Sbjct: 5 ILRLKKFFPASLHSRIFLTGGMVRDFLLGVACQDVDLAAAVTAAELASL----GFRLV-- 58
Query: 456 NGERHGTITARINDKENF-EVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLG 632
E T + ++ F ++ R++ V ++ D RRD +N+M +
Sbjct: 59 --ESKSTPNIYFSYRQEFGKIEVTRLESV-----------EELTSDLFRRDFRVNAMAMS 105
Query: 633 FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRF 761
DG++ D +G DL++R ++ + +D LRI R RF
Sbjct: 106 LDGALIDPLHGKADLEQRILS--ACTQTSITDDPLRIFRALRF 146
>UniRef50_A0LG26 Cluster: Polynucleotide adenylyltransferase region;
n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Polynucleotide adenylyltransferase region -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 888
Score = 52.8 bits (121), Expect = 1e-05
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 10/211 (4%)
Frame = +3
Query: 276 EVIDLKKIFDKYKHEIRI----AGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVR 443
E++ K F K ++ + GG VRDLL+ + D+D E + E
Sbjct: 463 EIVQTLKDFGKLAKDLGMKAYAVGGFVRDLLLRRSNLDIDIVVEGDGIEFARTYAREHGI 522
Query: 444 MINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSM 623
+ ++ T D +V + R + + K+D RRD TIN++
Sbjct: 523 RCRFH-KKFNTAVLIFPDDRRVDVASARFEYYQYPAALPIVEFSSLKMDLYRRDFTINTL 581
Query: 624 FLGFD----GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDN 791
L + G + D+F G DL+ + + + ++ + ED RI+R RF R +
Sbjct: 582 ALALNPGEFGQLIDFFGGQRDLKDKTIRVL--HNLSLVEDPTRILRAIRFEQRFGFRIG- 638
Query: 792 HEEETLXVLKNNVHG--LGNISGERIWGELK 878
++T+ +++N V L + G R+ E++
Sbjct: 639 --KQTVALIRNAVRMGLLQKLGGRRLLHEIQ 667
>UniRef50_Q2BK09 Cluster: TRNA nucleotidyl transferase; n=1;
Neptuniibacter caesariensis|Rep: TRNA nucleotidyl
transferase - Neptuniibacter caesariensis
Length = 370
Score = 52.4 bits (120), Expect = 1e-05
Identities = 59/196 (30%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINV-----NGERHGTI 479
+I + GGAVRD L+ D D+ ++PEEM E + V GE +
Sbjct: 2 KIYLVGGAVRDKLLNYPVYDKDWVVVGSSPEEMIESGYQPVGQDFPVFIHPETGEEYAL- 60
Query: 480 TARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYF 659
AR K T FAD T + D RRDLTIN+M + GS+ D +
Sbjct: 61 -ARTEMKSGKGYTGFNY-------FADKNVTLEE--DLVRRDLTINAMAMDEQGSLVDPY 110
Query: 660 YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKN--NVH 833
G +DL R + V ED LR++R RF R +ETL +++
Sbjct: 111 DGQKDLADRILRHVSP---AFSEDPLRVLRVARFASRYNHLGFRVAQETLNLMQELALTD 167
Query: 834 GLGNISGERIWGELKK 881
L +++ ER+W E ++
Sbjct: 168 ELEHLTTERVWKEFER 183
>UniRef50_A3LSZ1 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 559
Score = 52.4 bits (120), Expect = 1e-05
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Frame = +3
Query: 303 DKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTIT 482
+K+ E+RI GG VRD L+G D+D A E E +R+ N T
Sbjct: 35 NKFPLELRITGGWVRDKLLGNHSNDIDIAVNHQSGEQFASNLHEYLRVHNPELHLKAIHT 94
Query: 483 ARINDKENFEVTT-------LRIDMVT--------DGRFADVQFTKDWKLDANRRDLTIN 617
+ N +++ + T + ID V D R ++F + DA RRD T+N
Sbjct: 95 IKKNPEKSKHLETCTTKLFGMDIDFVNLRSEEYSDDSRVPIIKFGTP-EEDAYRRDATLN 153
Query: 618 SMFLGFDGSVYDYF--YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGR--IALKP 785
S+F + + + F G +DLQ + +P +D LR++R RF R ++P
Sbjct: 154 SLFFNLNKNEIEDFTGKGLQDLQDGVLRTPLEPLQTFLDDPLRVLRLIRFASRFNFIVEP 213
Query: 786 DNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
E T ++ ++ IS ERI EL K
Sbjct: 214 KTLEAMTSPEIRESL--TTKISKERIEVELLK 243
>UniRef50_A1C7Z8 Cluster: Poly(A) polymerase; n=8;
Eurotiomycetidae|Rep: Poly(A) polymerase - Aspergillus
clavatus
Length = 635
Score = 52.4 bits (120), Expect = 1e-05
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Frame = +3
Query: 408 EMKEMFTAEEVRMINVNGERH-GTITARINDKENFEVTTLRIDMVTD-GRFADVQFTKDW 581
E+KE + N +H T+T +I + ++ LR + TD R ++F
Sbjct: 209 ELKEAIVSLHKIEANPEKSKHLETVTTKIFGLD-IDLVNLRKETYTDESRNPQMEFGTAE 267
Query: 582 KLDANRRDLTINSMFLGFDGSVYDYFYG--YEDLQKRRVAFVGDPDVRVKEDYLRIMRYF 755
+ DA RRD TIN++F + S + F G +ED++ + + +P K+D LR++R
Sbjct: 268 E-DAMRRDATINALFYNLNESKVEDFTGRGFEDMRNKIIRTPLEPYQTFKDDPLRVLRLI 326
Query: 756 RFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
RF R+ D + + + + IS ER+ EL+K
Sbjct: 327 RFASRLGYNIDANTQLAMQNSDISTALKQKISKERVGTELEK 368
>UniRef50_A5G663 Cluster: Polynucleotide adenylyltransferase region;
n=1; Geobacter uraniumreducens Rf4|Rep: Polynucleotide
adenylyltransferase region - Geobacter uraniumreducens
Rf4
Length = 450
Score = 52.0 bits (119), Expect = 2e-05
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG VRDLL+G KDLDFA T E+ F ++ G R+ +
Sbjct: 30 LVGGGVRDLLLGRRLKDLDFALTGACAELPRRFAK------SIGGSFFWLDEERLQGR-- 81
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY---DYFYGYEDL 677
V D V FA Q + + D ++RD TIN++ L G Y D G+ DL
Sbjct: 82 --VVRKGGDGVLTFDFAP-QRGETIEEDLSQRDFTINALALPLAGGKYALIDPTGGFSDL 138
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGE 857
QK + +D LR++R RF + D +T+ +++ + L ++GE
Sbjct: 139 QKGIIRACS--PASFSDDPLRLLRAVRFAATLGFAIDEASRQTI-TMESAL--LERVAGE 193
Query: 858 RIWGEL 875
R+ EL
Sbjct: 194 RVRDEL 199
>UniRef50_UPI00015BD2D0 Cluster: UPI00015BD2D0 related cluster; n=1;
unknown|Rep: UPI00015BD2D0 UniRef100 entry - unknown
Length = 821
Score = 51.2 bits (117), Expect = 3e-05
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 4/178 (2%)
Frame = +3
Query: 261 SIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEV 440
S + ++D+K + K + ++ + GG VRD+++ D+DF + +++ + +
Sbjct: 439 SYMMDIIMDIKSVIPKGE-KLYLVGGVVRDIILNRPSYDIDFVFEGDIDLLEQSLKSHGI 497
Query: 441 RMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINS 620
+ G ++ + + E+++ R + V K D RRD TIN+
Sbjct: 498 KTHRFLG--FNSVHFKYKGFK-IEISSTRREYYEMAGAYPVVSKASLKEDLFRRDFTINT 554
Query: 621 MFLGFD----GSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALK 782
+ L D G+V DYF D+ K ++ V P + ED +RI+R RF ++ K
Sbjct: 555 LLLSLDEEDFGTVIDYFGALNDI-KNKIIRVLHP-LSFIEDPVRILRAIRFEAKLNFK 610
>UniRef50_A7BYS7 Cluster: PolyA polymerase; n=1; Beggiatoa sp.
PS|Rep: PolyA polymerase - Beggiatoa sp. PS
Length = 314
Score = 50.8 bits (116), Expect = 5e-05
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +3
Query: 588 DANRRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFY 764
DA RRD TIN+++ D S+ DY G DLQ + +G P +R +ED +R++R RF
Sbjct: 9 DAWRRDFTINALYYDISDFSLLDYANGLSDLQAGIIRLIGKPKLRYQEDPVRMLRAIRFS 68
Query: 765 GRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
++ ET ++ L NI R++ E+ K
Sbjct: 69 AKLNF---TIAPETAELIPQLGGLLANIPPARLFEEVLK 104
>UniRef50_A0Y839 Cluster: TRNA nucleotidyltransferase, putative;
n=1; marine gamma proteobacterium HTCC2143|Rep: TRNA
nucleotidyltransferase, putative - marine gamma
proteobacterium HTCC2143
Length = 367
Score = 50.8 bits (116), Expect = 5e-05
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 7/192 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGT-ITARINDKE 503
+ GGAVRD L+G + D+ TAE+ +IN+ + G ++ K
Sbjct: 5 LVGGAVRDKLLGYPYVERDWVVVGA--------TAEQ--LINLGYQPVGKDFPVFLHPKT 54
Query: 504 NFEVTTLRIDMVTDGRFA--DVQFTKDWKL--DANRRDLTINSMFLGFDGSVYDYFYGYE 671
E R + + + D + + L D RRDLTIN++ DG++ D + G +
Sbjct: 55 KEEYALARTERKSGPGYTGFDCYASPEVTLEEDLQRRDLTINAIAEDDDGTLIDPYGGQQ 114
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLK--NNVHGLGN 845
DL K + V +ED LRI+R RF R A +ETL ++K + L
Sbjct: 115 DLDKGILRHVSP---AFEEDPLRILRVARFSARYAHLGFTLADETLLLMKKISASDELLA 171
Query: 846 ISGERIWGELKK 881
+ ER+W E+ +
Sbjct: 172 LPAERVWKEMHR 183
>UniRef50_Q8GZ55 Cluster: Putative poly(A) polymerase; n=3;
Arabidopsis thaliana|Rep: Putative poly(A) polymerase -
Arabidopsis thaliana (Mouse-ear cress)
Length = 571
Score = 50.8 bits (116), Expect = 5e-05
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +3
Query: 558 DVQFTKDWKLDANRRDLTINSMFLG-FDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDY 734
D++ K W+ ++ +RD TINS+F FD ++YDY G EDL ++ + + KED
Sbjct: 6 DIKDCKRWR-NSLQRDFTINSLFYNPFDFTIYDYANGMEDLTDLKLRTLVPAHLSFKEDC 64
Query: 735 LRIMRYFRFYGRIAL 779
RI+R R R+ L
Sbjct: 65 ARILRGLRIAARLGL 79
>UniRef50_A5WEX7 Cluster: tRNA cytidylyltransferase; n=1;
Psychrobacter sp. PRwf-1|Rep: tRNA cytidylyltransferase
- Psychrobacter sp. PRwf-1
Length = 413
Score = 50.4 bits (115), Expect = 6e-05
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
++ I GGAVRD L+ D DF ATPE+M E I V + +
Sbjct: 2 QVYIVGGAVRDELLNRPYTDKDFVVVGATPEQMIE------AGFIQVGADF--PVFLHPK 53
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDAN--RRDLTINSMFLG---------FDG 641
KE + + + +V + + ++ + RRDLTIN+M + G
Sbjct: 54 TKEEYALARTERKSGKGYKGFEVYASPEVTIEEDLLRRDLTINAMAIEVKSLWDSTPLTG 113
Query: 642 SVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHE----EETL 809
V D + G D++ + + V + ED LR++R RFYGR H +TL
Sbjct: 114 EVIDPYDGQSDIKNKMLRHVSEA---FSEDPLRVLRIARFYGRFYDPKAEHNFSIAPDTL 170
Query: 810 XVLK--NNVHGLGNISGERIWGELKK 881
++ N+ L ++ ER+W E +
Sbjct: 171 ALIATINDSDELACLTAERVWQETSR 196
>UniRef50_A7BYS8 Cluster: Poly(A) polymerase; n=1; Beggiatoa sp.
PS|Rep: Poly(A) polymerase - Beggiatoa sp. PS
Length = 161
Score = 50.0 bits (114), Expect = 8e-05
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +3
Query: 183 FRSKMDLNLK--CRENPIVIKVDSPEF-KSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDL 353
F SK+ L ++ ++ PI I + + + + + + +K ++ + GG VRD+
Sbjct: 40 FHSKVSLPVRDSIKKTPIRIPRNEHTLSRKLMSPAALTVLYQLNKAGYQAFLVGGGVRDV 99
Query: 354 LMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLR 527
L+G PKD D T A PE++K +F R + G R RIN +E EV T R
Sbjct: 100 LLGRVPKDFDVVTNALPEQIKNIF-----RSCRLIGRRFVLAHVRIN-REIVEVATFR 151
>UniRef50_Q74ZT0 Cluster: AGR118Wp; n=1; Eremothecium gossypii|Rep:
AGR118Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 533
Score = 50.0 bits (114), Expect = 8e-05
Identities = 59/204 (28%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTI------TA 485
RIAGG VRD L+GL +DLD E F + V + G + A
Sbjct: 78 RIAGGWVRDKLLGLESEDLDIVLNNVTGER---FASGLVEFLKAQGGSARGVHKIQRNPA 134
Query: 486 RINDKENFEVTTL--RIDMVT--------DGRFADVQFTKDWKLDANRRDLTINSMFLGF 635
R E T L +D V + R V+F + DA RRD T+N++F
Sbjct: 135 RSKHLETCTTTVLGVAVDFVNLRSETYAEESRVPTVEFGTPLQ-DAMRRDATLNALFYNI 193
Query: 636 -DGSVYDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL 809
+G V D+ G DL + +D LR++R RF R + DN E +
Sbjct: 194 LEGVVEDFTGRGLADLAAGVLRTPMPARQTFLDDPLRVLRLVRFAARFGFELDNEAREGM 253
Query: 810 XVLKNNVHGLGNISGERIWGELKK 881
+ + IS ER+ EL K
Sbjct: 254 AYRDIHAALVRKISRERVGTELHK 277
>UniRef50_Q8KDQ5 Cluster: PolyA polymerase family protein; n=10;
Chlorobiaceae|Rep: PolyA polymerase family protein -
Chlorobium tepidum
Length = 475
Score = 49.6 bits (113), Expect = 1e-04
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 9/194 (4%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMIN-VNGERHGTITARINDKE 503
I GG VRDL+M D+D P AE++ N V ER T ++D +
Sbjct: 29 IVGGYVRDLIMQRPCTDIDIMVIGEPVPFAHAL-AEKLGGRNFVLFERFRTAQLELDDPK 87
Query: 504 ----NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYF 659
E+ R + + + D +RRD TIN++ L + G V D F
Sbjct: 88 AGTFKLEIVGARKESYNPESRKPITSIGTLEDDLSRRDFTINALALRLNRKERGEVVDLF 147
Query: 660 YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHGL 839
G ++++ + DP+ +D LR+MR RF ++ + D E TL + +
Sbjct: 148 DGQRHIREKLLKTPLDPEQTFSDDPLRMMRAARFACQLDFQLD---EATLTAMSTMSSRI 204
Query: 840 GNISGERIWGELKK 881
+S ER+ E K
Sbjct: 205 QIVSRERVSHEFFK 218
>UniRef50_A1IDZ7 Cluster: PolyA polymerase family protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: PolyA
polymerase family protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 896
Score = 49.6 bits (113), Expect = 1e-04
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 6/191 (3%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
+ GG VRDL + + +D+D F ++ ++ GT D
Sbjct: 497 VVGGFVRDLFLSRSTEDVDIVIEGDGIAFAREFAGRMKARVHYY-KKFGTAVITFADGSK 555
Query: 507 FEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYGYED 674
+V + R++ KLD RRD TIN++ + + G + D+F D
Sbjct: 556 IDVASARLEYYQFPAALPTVEMSSIKLDLFRRDFTINTLAVCLNPDKFGLLVDFFSAQRD 615
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNV--HGLGNI 848
++++ + + + ED RI R RF R E ++KN V +
Sbjct: 616 IKEKTIRVL--HSLSFVEDPTRIFRAVRFEQRFGFTIGKMTE---GLIKNAVKMEFFRRL 670
Query: 849 SGERIWGELKK 881
SG R++GEL++
Sbjct: 671 SGHRVFGELRQ 681
>UniRef50_Q7U391 Cluster: CCA-adding enzyme; n=4; Bordetella|Rep:
CCA-adding enzyme - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 364
Score = 49.6 bits (113), Expect = 1e-04
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
++ I GGAVRD L+GL D D+ ATPE+M I V G+ + R
Sbjct: 13 QVYIVGGAVRDGLLGLPAGDRDWVVVGATPEDMARR------GFIPVGGDFPVFLHPRTK 66
Query: 495 DKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYED 674
++ T + G + D RRDLT+N++ G + D G D
Sbjct: 67 EEYALARTERKSGRGYKGFTFYTGADVTLEQDLQRRDLTVNAIARTPQGELVDPLDGVAD 126
Query: 675 LQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGNI 848
++ R + VG+ ED +RI+R RF R + ET+ + + V +
Sbjct: 127 VRARVLRHVGE---AFAEDPVRILRLGRFAARFG--DFSIAPETMQLCRRMVEAGEADAL 181
Query: 849 SGERIWGELKK 881
ER+W E+ +
Sbjct: 182 VPERVWKEVSR 192
>UniRef50_Q9UTQ0 Cluster: Probable tRNA nucleotidyltransferase; n=2;
Schizosaccharomyces pombe|Rep: Probable tRNA
nucleotidyltransferase - Schizosaccharomyces pombe
(Fission yeast)
Length = 500
Score = 49.6 bits (113), Expect = 1e-04
Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Frame = +3
Query: 291 KKI--FDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATP----EEMKEMFTAE-----E 437
KKI D+ + E+R AGG VRD L+ + D+D A + + + A+ E
Sbjct: 26 KKIGQMDRKEPEVRFAGGWVRDKLLRIESHDIDVAIDCMSGFEFAQHLQSYLAQQHPDWE 85
Query: 438 VRMINVNGE----RH-GTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRR 602
++I ++ +H T TARI + ++ LR T+ ++ DA RR
Sbjct: 86 TKVIKIDANPLKSKHLETATARIMGMD-IDIVNLRHHDYTNSNSSNKLVFGTPLEDALRR 144
Query: 603 DLTINSMFLGFDGSVYDYF--YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIA 776
D TIN++F + F G DL + + D +D LR +R RF A
Sbjct: 145 DATINALFYNLKSKTVEDFTGKGLVDLSNKIIRTPLVADETFGDDPLRAVRCIRF----A 200
Query: 777 LKPD-NHEEETLXVLKN-NVHG--LGNISGERIWGELKK 881
K D N EET+ LKN +H +IS ERI E+ K
Sbjct: 201 TKYDFNIHEETIKGLKNPELHERLRSSISRERIGVEVDK 239
>UniRef50_A6GQU7 Cluster: Polynucleotide adenylyltransferase
region:Metal-dependent phosphohydrolase, HD subdomain;
n=1; Limnobacter sp. MED105|Rep: Polynucleotide
adenylyltransferase region:Metal-dependent
phosphohydrolase, HD subdomain - Limnobacter sp. MED105
Length = 393
Score = 49.2 bits (112), Expect = 1e-04
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND 497
++ + GGAVRD LMG D D+ + M A V + + R ++
Sbjct: 27 KVYVVGGAVRDALMGRASSDRDWVVVGATVD--HMLAAG---FTPVGSDFPVFLHPRTHE 81
Query: 498 KENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDL 677
+ T + G + + + D RRD T+N+M + +G + D F G DL
Sbjct: 82 EYALARTERKSGHGYKGFTFHAEPSVTLEEDLARRDFTVNAMAMNAEGGLIDPFQGLADL 141
Query: 678 QKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKN-NVHG-LGNIS 851
+ + + V ED LR++R RF R + EET+ + + G L ++
Sbjct: 142 ENKCMRHVSP---AFSEDPLRVLRLARFLARFL--DFSVAEETMDLCRELQASGELKHLV 196
Query: 852 GERIWGELKK 881
ER++ EL K
Sbjct: 197 PERVYAELTK 206
>UniRef50_UPI0000E87B3C Cluster: tRNA nucleotidyl transferase,
putative; n=1; Methylophilales bacterium HTCC2181|Rep:
tRNA nucleotidyl transferase, putative - Methylophilales
bacterium HTCC2181
Length = 378
Score = 48.8 bits (111), Expect = 2e-04
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGT-ITARI 491
+I + GGAVRD L+ + KD D+ ATPE M +N+ + G +
Sbjct: 2 KIYLVGGAVRDSLLNIPFKDKDYLVVGATPEIM-----------VNLGFKPIGKDFPVFL 50
Query: 492 NDKENFEVTTLRIDMVTDGRFADVQF--TKDWKL--DANRRDLTINSMFLGFDGSVYDYF 659
+ K N E R + F + D + D RRD+TIN++ +G+ D +
Sbjct: 51 HPKSNEEYALARTEKKIAAGHKGFNFYASPDVSIEEDLKRRDITINAIAQDSEGNYIDPY 110
Query: 660 YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG- 836
G D+ K+ + V +ED LR++R RF + L +ET+ ++K V
Sbjct: 111 DGISDIGKKIIRHVSP---SFQEDPLRVLRVARF--KAKLPSFVIYDETMMLMKRMVADG 165
Query: 837 -LGNISGERIWGELKK 881
+ +S ER+ EL K
Sbjct: 166 EVECLSSERVTAELMK 181
>UniRef50_Q0AX27 Cluster: PolyA polymerase family protein precursor;
n=1; Syntrophomonas wolfei subsp. wolfei str.
Goettingen|Rep: PolyA polymerase family protein precursor
- Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 880
Score = 48.8 bits (111), Expect = 2e-04
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFE 512
GG VRD + + D+D EE+ ++ +R T + D +
Sbjct: 482 GGFVRDFFLRVPNFDVDLVVEGDGEELARKMAQHLGGKARIH-QRFRTAALMLPDGTKID 540
Query: 513 VTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDYFYGYEDLQ 680
+ T R + + D RRD TIN++ + + G + DYF G +DL+
Sbjct: 541 IATARTEYYEFPAALPKVEKASIREDMYRRDFTINTLAIALNPDSFGDLIDYFGGRKDLE 600
Query: 681 KRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVHG--LGNISG 854
K + + ++ ED RI+R RF R E++TL K+ + LG +S
Sbjct: 601 KGLIRIL--YNLSFVEDPTRIIRAIRFEQRYKF---TIEDDTLRFAKDAIERRLLGKLSY 655
Query: 855 ERIWGEL 875
+RI EL
Sbjct: 656 KRIIQEL 662
>UniRef50_A5UX62 Cluster: Polynucleotide adenylyltransferase region;
n=2; Roseiflexus|Rep: Polynucleotide adenylyltransferase
region - Roseiflexus sp. RS-1
Length = 874
Score = 48.8 bits (111), Expect = 2e-04
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Frame = +3
Query: 327 IAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKEN 506
I GGAVRD+++ TP DLD + E AE + + GT T + +E
Sbjct: 473 IVGGAVRDMILQRTPDDLDLVVEGDAIGLAEALAAELNGTVRSHA-AFGTATLTLAREEG 531
Query: 507 FEVTTLRIDMV------TDGRFADVQFTKDWKLDANRRDLTINSMFLGFD----GSVYDY 656
TL M DV+ + D +RRD TIN++ + + G +YD+
Sbjct: 532 QAPLTLDFVMARTEFYERPSALPDVE-AASLRHDLHRRDFTINTLAICLNPTRYGWLYDF 590
Query: 657 FYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETL-XVLKNNVH 833
+ G D+ ++ + + ++ +D RI+R R R+ + + L+ V
Sbjct: 591 YGGRRDITRKLIRVL--HNLSFIDDPTRILRAARLAARLGFTIEPRTRALIGDALEQGV- 647
Query: 834 GLGNISGERIWGELK 878
LG + +RI EL+
Sbjct: 648 -LGRATPQRIMHELR 661
>UniRef50_A7TSN1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 549
Score = 48.8 bits (111), Expect = 2e-04
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 20/208 (9%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEM--------------KEMFTAEEVRMINV 455
E+RI GG VRD L+G DLD A E + + I+
Sbjct: 67 ELRITGGWVRDKLLGSESHDLDIAINIMSGENFATKLNDFLQIHYDRYNLKPHSIHKIDK 126
Query: 456 NGERHG---TITARINDKENFEVTTLRIDMVTDG-RFADVQFTKDWKLDANRRDLTINSM 623
N E+ T T ++ D E + LR + T+ R V+F + DA RRD T+N++
Sbjct: 127 NPEKSKHLETATTKLFDVE-VDFVNLRSEEYTENSRIPTVEFGTP-EQDALRRDATLNAL 184
Query: 624 FLGFDGSVYDYF--YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHE 797
F + F G EDL + P +D LR++R RF R + ++
Sbjct: 185 FYNISKKEVEDFTGRGIEDLSAGILRTPLPPRKTFLDDPLRVLRLIRFASRFNFQIEDSV 244
Query: 798 EETLXVLKNNVHGLGNISGERIWGELKK 881
+ + N IS ERI E++K
Sbjct: 245 KNAMSDKDINKAFYTKISRERIGVEMEK 272
>UniRef50_Q8R5S7 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase; n=3; Thermoanaerobacter|Rep: TRNA
nucleotidyltransferase/poly(A) polymerase -
Thermoanaerobacter tengcongensis
Length = 390
Score = 48.4 bits (110), Expect = 2e-04
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 1/197 (0%)
Frame = +3
Query: 288 LKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGER 467
LK+I K + I GG VRD L+G+ D+D + E ++ +
Sbjct: 14 LKEISQKVGVKSYIVGGVVRDFLLGVENWDIDVVVEGNGIDFAYELN-EYIKGELIEYPA 72
Query: 468 HGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLG-FDGS 644
T T + + ++ R ++F ++ D RRD TIN++ +
Sbjct: 73 FKTATIKKSGISIDVISARREYYDYPAALPRIEFADIYE-DMRRRDFTINTLAYDVLEEK 131
Query: 645 VYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKN 824
+ DYF G EDL+K + + + +D RI R R+ R + + E T ++K+
Sbjct: 132 ILDYFGGIEDLKKGIIRVLHEKS--FIDDPTRIFRAIRYSVRYSFE---IEANTEALMKD 186
Query: 825 NVHGLGNISGERIWGEL 875
++ + +S +RI EL
Sbjct: 187 SIKNISLLSEDRIRNEL 203
>UniRef50_Q72BI3 Cluster: PolyA polymerase family protein; n=3;
Desulfovibrio|Rep: PolyA polymerase family protein -
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579
/ NCIMB8303)
Length = 904
Score = 48.0 bits (109), Expect = 3e-04
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Frame = +3
Query: 333 GGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNGERHGTITARIND---KE 503
GG VRDLL+ DLD +F AE + + + + ++ ++
Sbjct: 492 GGFVRDLLLDRPNYDLDLVIEGDGVAFARVFAAEVGGRLREHAKFKTALVIFTDENGAEQ 551
Query: 504 NFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY----DYFYGYE 671
+V T R++ K+D RRD TIN++ + DG+ + D+F
Sbjct: 552 RVDVATARLEYYEYPAALPTVELSSIKMDLFRRDFTINALAVQLDGAQFGRLVDFFGSQR 611
Query: 672 DLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKNNVH-GL-GN 845
D++ + + + + ED RI+R RF R + +T ++KN + GL G
Sbjct: 612 DMKDKGIRVL--HSLSFVEDPTRILRAVRFAVRYDF---SIGPQTQRLIKNALGLGLMGR 666
Query: 846 ISGERIWGELK 878
+SG RI+ EL+
Sbjct: 667 LSGPRIFHELR 677
>UniRef50_A5K4L8 Cluster: tRNA nucleotidyltransferase, putative;
n=1; Plasmodium vivax|Rep: tRNA nucleotidyltransferase,
putative - Plasmodium vivax
Length = 689
Score = 48.0 bits (109), Expect = 3e-04
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Frame = +3
Query: 288 LKKIFDKYKHE--IRIAGGAVRDLLMGLTPKDLDFAT-----TATPEEMKEMFTAEEVR- 443
L+K+ + YK + +R+ GG VRD +G++ D+D + +KE +E +
Sbjct: 61 LQKVNETYKLQCTLRVVGGWVRDKFLGISNDDIDLTVDNMKGSEFCNYIKEYIQEKEKKN 120
Query: 444 ----MINVNGERHGTITARINDKENF--EVTTLRIDMVT-DGRFADVQFTKDWKLDANRR 602
+I +N ++ + + NF +V LR + T D R ++ + DA RR
Sbjct: 121 FNFGIIKINSDQSKHLETSSFNLFNFQVDVVNLRNEKYTEDSRIPEIIIGTP-EEDALRR 179
Query: 603 DLTINSMFLGFDG-SVYDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYG 767
D T+N++F + V DY G L+ + + DP +D LRI+R RF G
Sbjct: 180 DFTVNALFYNLNNRRVEDYTRRGILHLKNKIICTPLDPLSTFLDDPLRIIRCIRFCG 236
>UniRef50_Q6CSU9 Cluster: Similarity; n=2; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 489
Score = 48.0 bits (109), Expect = 3e-04
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Frame = +3
Query: 324 RIAGGAVRDLLMGLTPKDLDFA-TTATPEEMKEMFTA---------EEVRMINVNGERH- 470
RI GG VRD L+G DLD A T E+ E A + I+ N +
Sbjct: 42 RITGGWVRDKLLGNDSNDLDIAINNMTGEQFAEKLCAFLQDRGLETHSLHTIDKNPSKSK 101
Query: 471 --GTITARINDKENFEVTTLRIDMVT-DGRFADVQFTKDWKLDANRRDLTINSMFLGF-D 638
T T ++ D + LR + T + R V+F + DA RRD T+N+MF +
Sbjct: 102 HLETCTTKLFDVP-VDFVNLRSEEYTMESRIPKVEFGTPYD-DAMRRDATLNAMFYNITE 159
Query: 639 GSVYDYF-YGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXV 815
+ D+ G++DL + P +D LR++R RF R + D +T
Sbjct: 160 DKIEDFTKKGFQDLNDGILRTPLPPRQTFIDDPLRVLRLIRFASRFNFQID---PQTYQA 216
Query: 816 LKN-NVHGLGN--ISGERIWGELKK 881
+++ +H N IS R++ E+ K
Sbjct: 217 MRDPGIHQSFNHKISKGRVYTEMHK 241
>UniRef50_A0Q0F2 Cluster: PolyA polymerase family protein, putative;
n=1; Clostridium novyi NT|Rep: PolyA polymerase family
protein, putative - Clostridium novyi (strain NT)
Length = 394
Score = 47.6 bits (108), Expect = 4e-04
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 2/214 (0%)
Frame = +3
Query: 240 VDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATP-EEMK 416
+D+ +FK + E + +K+ K+ I GGA+RD ++ + PKD+D + +
Sbjct: 4 LDNFDFKEL--EAINLIKETCSKFNANAYIVGGAIRDSILNVKPKDIDICIESNSINIIS 61
Query: 417 EMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDAN 596
++ +E + E+ T T ++ ++ R + + D
Sbjct: 62 KLNFVKEYKYY----EKFQTSTIVFENEVEIDLIRCRKEKYEFNGALPKVIPSNIMDDLF 117
Query: 597 RRDLTINSMFLGF-DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRD T N++ + ++ D F G +D+ K + + + ED RI R ++ R
Sbjct: 118 RRDFTCNAIAYNLVNDTIIDPFNGRDDINKGILRKIHENS--YMEDPTRIFRAIKYANRY 175
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGEL 875
K + +E +LK + + NIS +RI E+
Sbjct: 176 DFKIHDKDEIKESLLKKS---MNNISNDRIIREI 206
>UniRef50_Q89B06 Cluster: CCA-adding enzyme; n=3; Buchnera
aphidicola|Rep: CCA-adding enzyme - Buchnera aphidicola
subsp. Baizongia pistaciae
Length = 419
Score = 47.6 bits (108), Expect = 4e-04
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATT-ATPEEMKEMFTAEEVRMINVNGERHGTITARIN 494
++ + GGA+R+ + L +D D+ ATPE + + + + + + +
Sbjct: 2 KVYLVGGAIRNKFLNLPVQDRDWVVVGATPEILLSL----KFKQVG----KGFPVFLHPY 53
Query: 495 DKENFEVTTL--RIDMVTDGRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGY 668
KE + + + +I + G D K D RRDLTIN++ +G+ D F G
Sbjct: 54 SKEEYSLARVDRKIGVGHTGFSFDYSNKVTLKEDLMRRDLTINAIAQDNNGNYIDPFKGI 113
Query: 669 EDLQKRRVAFVGDPDVRVKEDYLRIMRYFRF---YGRIALKPDNHEEETLXVLKNNVHGL 839
D++ R + V ED LR++R RF + + + + + ++ N + L
Sbjct: 114 RDIKNRILRHVSP---AFSEDPLRVLRIARFCALFHHLGFRIATETMKIMSIVVKN-NEL 169
Query: 840 GNISGERIWGELKK 881
N++ +R+W E +K
Sbjct: 170 LNLTRDRVWKETEK 183
>UniRef50_Q97HE9 Cluster: TRNA nucleotidyltransferase family enzyme;
n=1; Clostridium acetobutylicum|Rep: TRNA
nucleotidyltransferase family enzyme - Clostridium
acetobutylicum
Length = 393
Score = 47.2 bits (107), Expect = 6e-04
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Frame = +3
Query: 285 DLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATP-EEMKEMFTAEEVRMINVNG 461
D+K+ + K + I GGAVRD ++ + KD+D P +KE+ + ++ V
Sbjct: 17 DIKRACKEKKIKAYIIGGAVRDSILNVKSKDIDVCVEGDPLIIIKELKSLKDY----VYY 72
Query: 462 ERHGTITARINDKENFEVTTLRID-MVTDGRFADVQFTKDWKLDANRRDLTINSMFLGF- 635
E+ T T N+ + ++ R + + DG V+ K D RRD T+N++
Sbjct: 73 EKFQTSTIYFNNGVSVDLIRCRKETYLKDGMLPIVE-PSSIKDDIYRRDFTVNALAYDIV 131
Query: 636 DGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXV 815
D + D++ G +D+ + + + ED RI R ++ R + ++ + +
Sbjct: 132 DERIIDFYGGIDDINNKVIKSIHKNS--YSEDCTRIFRAIKYSIRYGFEIED-DFVFNSL 188
Query: 816 LKNNVHGLGNISGERIWGEL 875
+ NN+ IS ER EL
Sbjct: 189 IGNNI--FNTISFERYIKEL 206
>UniRef50_Q9Y7U9 Cluster: ATP(CTP) tRNA nucleotidyltransferase; n=1;
Schizosaccharomyces pombe|Rep: ATP(CTP) tRNA
nucleotidyltransferase - Schizosaccharomyces pombe
(Fission yeast)
Length = 484
Score = 47.2 bits (107), Expect = 6e-04
Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 19/207 (9%)
Frame = +3
Query: 318 EIRIAGGAVRDLLMGLTPKDLDFATTATPEEMKEMFTAEEVRMINVNG-----ERHGTIT 482
E+R+AGG VRD L+GL+ DLD E V ++ + + G +T
Sbjct: 36 EVRLAGGWVRDKLLGLSSDDLDVTLNKVTGVDFANSIFEYVHSLDSDSVIPYKDALGKLT 95
Query: 483 ARINDKENFEVTTLRI-DMVTD--GRFADVQFTKDW---------KLDANRRDLTINSMF 626
+ ++ E TL + D+ D G A+ K + DA RRD T+N++F
Sbjct: 96 VNPDQSKHLETATLSLFDLDIDFVGLRAESYDDKSRIPSVTPGTVETDALRRDFTVNTLF 155
Query: 627 LGFDGSVYDYFY--GYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEE 800
+ GY+DLQ + + P ED LRI+R RF R D
Sbjct: 156 FNIRTEKIEDITKRGYKDLQTKVLVTPISPLQSFLEDPLRILRGIRFASRFEFTIDPSVV 215
Query: 801 ETLXVLKNNVHGLGNISGERIWGELKK 881
+ K +S ER+ E++K
Sbjct: 216 SAIQDPKVCKAFEKKVSKERVGEEIEK 242
>UniRef50_Q1DJQ5 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 625
Score = 47.2 bits (107), Expect = 6e-04
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +3
Query: 474 TITARINDKENFEVTTLRIDMVTD-GRFADVQFTKDWKLDANRRDLTINSMFLGFDGSVY 650
T+ +I E ++ LR + +D R +++F + DA RRD T+N++F S
Sbjct: 211 TVATKIFGLE-VDLVNLRKETYSDHSRHPEMEFGTAEE-DALRRDATVNALFYNLHTSSV 268
Query: 651 DYFYG--YEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRIALKPDNHEEETLXVLKN 824
+ F G DL+ + +P K+D LR++R RF R+ K D + EE++
Sbjct: 269 EDFTGRGIADLRAHLIRTPLEPYQTFKDDPLRVLRLIRFSSRLGYKIDPNTEESMQHDDI 328
Query: 825 NVHGLGNISGERIWGELKK 881
IS ERI E++K
Sbjct: 329 KDALKLKISQERIGAEVEK 347
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,985,334
Number of Sequences: 1657284
Number of extensions: 15764998
Number of successful extensions: 42776
Number of sequences better than 10.0: 308
Number of HSP's better than 10.0 without gapping: 40724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42458
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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