Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_E03
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012537-1|AAH12537.1| 405|Homo sapiens tRNA nucleotidyl transf... 302 9e-82
AF151805-1|AAD34042.1| 405|Homo sapiens CGI-47 protein protein. 302 9e-82
AB063105-1|BAB70662.1| 434|Homo sapiens tRNA-nucleotidyltransfe... 302 9e-82
BC101731-1|AAI01732.1| 299|Homo sapiens taste receptor T2R1 pro... 33 1.8
BC101729-1|AAI01730.1| 299|Homo sapiens taste receptor, type 2,... 33 1.8
BC095521-1|AAH95521.1| 299|Homo sapiens taste receptor, type 2,... 33 1.8
AY724812-1|AAU21051.1| 299|Homo sapiens taste receptor T2R1 pro... 33 1.8
AF227129-1|AAF43902.1| 299|Homo sapiens candidate taste recepto... 33 1.8
AB198985-1|BAD97891.1| 251|Homo sapiens bitter taste receptor T... 31 5.6
AB198984-1|BAD97890.1| 251|Homo sapiens bitter taste receptor T... 31 5.6
AB198983-1|BAD97889.1| 251|Homo sapiens bitter taste receptor T... 31 5.6
AF440756-1|AAM76995.1| 509|Homo sapiens vitelliform macular dys... 31 7.4
AK023749-1|BAB14666.1| 875|Homo sapiens protein ( Homo sapiens ... 30 9.8
>BC012537-1|AAH12537.1| 405|Homo sapiens tRNA nucleotidyl
transferase, CCA-adding, 1 protein.
Length = 405
Score = 302 bits (742), Expect = 9e-82
Identities = 139/216 (64%), Positives = 174/216 (80%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
+K+ SPEF+S+FTE + L ++F K HE+RIAGGAVRDLL G+ P+D+DFATTATP +M
Sbjct: 1 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 60
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
KEMF + +RMIN GE+HGTITAR+++ ENFE+TTLRID+ TDGR A+V+FT DW+ DA
Sbjct: 61 KEMFQSAGIRMINNRGEKHGTITARLHE-ENFEITTLRIDVTTDGRHAEVEFTTDWQKDA 119
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRDLTINSMFLGFDG+++DYF GYEDL+ ++V FVG R++EDYLRI+RYFRFYGRI
Sbjct: 120 ERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 179
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
KP +H+ ETL + N GL ISGERIW ELKK
Sbjct: 180 VDKPGDHDPETLEAIAENAKGLAGISGERIWVELKK 215
>AF151805-1|AAD34042.1| 405|Homo sapiens CGI-47 protein protein.
Length = 405
Score = 302 bits (742), Expect = 9e-82
Identities = 139/216 (64%), Positives = 174/216 (80%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
+K+ SPEF+S+FTE + L ++F K HE+RIAGGAVRDLL G+ P+D+DFATTATP +M
Sbjct: 1 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 60
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
KEMF + +RMIN GE+HGTITAR+++ ENFE+TTLRID+ TDGR A+V+FT DW+ DA
Sbjct: 61 KEMFQSAGIRMINNRGEKHGTITARLHE-ENFEITTLRIDVTTDGRHAEVEFTTDWQKDA 119
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRDLTINSMFLGFDG+++DYF GYEDL+ ++V FVG R++EDYLRI+RYFRFYGRI
Sbjct: 120 ERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 179
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
KP +H+ ETL + N GL ISGERIW ELKK
Sbjct: 180 VDKPGDHDPETLEAIAENAKGLAGISGERIWVELKK 215
>AB063105-1|BAB70662.1| 434|Homo sapiens
tRNA-nucleotidyltransferase protein.
Length = 434
Score = 302 bits (742), Expect = 9e-82
Identities = 139/216 (64%), Positives = 174/216 (80%)
Frame = +3
Query: 234 IKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFATTATPEEM 413
+K+ SPEF+S+FTE + L ++F K HE+RIAGGAVRDLL G+ P+D+DFATTATP +M
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 414 KEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDA 593
KEMF + +RMIN GE+HGTITAR+++ ENFE+TTLRID+ TDGR A+V+FT DW+ DA
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHE-ENFEITTLRIDVTTDGRHAEVEFTTDWQKDA 148
Query: 594 NRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMRYFRFYGRI 773
RRDLTINSMFLGFDG+++DYF GYEDL+ ++V FVG R++EDYLRI+RYFRFYGRI
Sbjct: 149 ERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 208
Query: 774 ALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
KP +H+ ETL + N GL ISGERIW ELKK
Sbjct: 209 VDKPGDHDPETLEAIAENAKGLAGISGERIWVELKK 244
>BC101731-1|AAI01732.1| 299|Homo sapiens taste receptor T2R1
protein.
Length = 299
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = -3
Query: 457 LTFIILTSSAVNISFISSGVAVVAKSRSFGVSPIKRSLTAPPAILISCLYLSKIFFRSIT 278
+ + +L + ++G+ VV G+ IK AP +L+SCL +S+IF +
Sbjct: 7 IIYFLLAVIQFLLGIFTNGIIVVVN----GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFI 62
Query: 277 SSVNILL 257
VN+++
Sbjct: 63 FYVNVIV 69
>BC101729-1|AAI01730.1| 299|Homo sapiens taste receptor, type 2,
member 1 protein.
Length = 299
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = -3
Query: 457 LTFIILTSSAVNISFISSGVAVVAKSRSFGVSPIKRSLTAPPAILISCLYLSKIFFRSIT 278
+ + +L + ++G+ VV G+ IK AP +L+SCL +S+IF +
Sbjct: 7 IIYFLLAVIQFLLGIFTNGIIVVVN----GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFI 62
Query: 277 SSVNILL 257
VN+++
Sbjct: 63 FYVNVIV 69
>BC095521-1|AAH95521.1| 299|Homo sapiens taste receptor, type 2,
member 1 protein.
Length = 299
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = -3
Query: 457 LTFIILTSSAVNISFISSGVAVVAKSRSFGVSPIKRSLTAPPAILISCLYLSKIFFRSIT 278
+ + +L + ++G+ VV G+ IK AP +L+SCL +S+IF +
Sbjct: 7 IIYFLLAVIQFLLGIFTNGIIVVVN----GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFI 62
Query: 277 SSVNILL 257
VN+++
Sbjct: 63 FYVNVIV 69
>AY724812-1|AAU21051.1| 299|Homo sapiens taste receptor T2R1
protein.
Length = 299
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = -3
Query: 457 LTFIILTSSAVNISFISSGVAVVAKSRSFGVSPIKRSLTAPPAILISCLYLSKIFFRSIT 278
+ + +L + ++G+ VV G+ IK AP +L+SCL +S+IF +
Sbjct: 7 IIYFLLAVIQFLLGIFTNGIIVVVN----GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFI 62
Query: 277 SSVNILL 257
VN+++
Sbjct: 63 FYVNVIV 69
>AF227129-1|AAF43902.1| 299|Homo sapiens candidate taste receptor
T2R1 protein.
Length = 299
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = -3
Query: 457 LTFIILTSSAVNISFISSGVAVVAKSRSFGVSPIKRSLTAPPAILISCLYLSKIFFRSIT 278
+ + +L + ++G+ VV G+ IK AP +L+SCL +S+IF +
Sbjct: 7 IIYFLLAVIQFLLGIFTNGIIVVVN----GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFI 62
Query: 277 SSVNILL 257
VN+++
Sbjct: 63 FYVNVIV 69
>AB198985-1|BAD97891.1| 251|Homo sapiens bitter taste receptor T2R1
protein.
Length = 251
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 370 GVSPIKRSLTAPPAILISCLYLSKIFFRSITSSVNILL 257
G+ IK AP +L+SCL +S+IF + VN+++
Sbjct: 2 GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIV 39
>AB198984-1|BAD97890.1| 251|Homo sapiens bitter taste receptor T2R1
protein.
Length = 251
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 370 GVSPIKRSLTAPPAILISCLYLSKIFFRSITSSVNILL 257
G+ IK AP +L+SCL +S+IF + VN+++
Sbjct: 2 GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIV 39
>AB198983-1|BAD97889.1| 251|Homo sapiens bitter taste receptor T2R1
protein.
Length = 251
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 370 GVSPIKRSLTAPPAILISCLYLSKIFFRSITSSVNILL 257
G+ IK AP +L+SCL +S+IF + VN+++
Sbjct: 2 GIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIV 39
>AF440756-1|AAM76995.1| 509|Homo sapiens vitelliform macular
dystrophy 2-like protein 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 7.4
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Frame = +3
Query: 441 RMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQFTKDWKLDANRRDLTINS 620
++IN GE NF+V+ L +D + D A ++ W R T +
Sbjct: 293 QLINPFGEDDDDFETNFLIDRNFQVSMLAVDEMYDD-LAVLEKDLYWDAAEARAPYTAAT 351
Query: 621 MFL----GFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLR 740
+F F GS +D ED+Q +R+ + P D+L+
Sbjct: 352 VFQLRQPSFQGSTFDITLAKEDMQFQRLDGLDGPMGEAPGDFLQ 395
>AK023749-1|BAB14666.1| 875|Homo sapiens protein ( Homo sapiens
cDNA FLJ13687 fis, clone PLACE2000061. ).
Length = 875
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 663 GYEDLQKRRVAFVGDPDVRVKEDYLRIMR-YFRFYGRIALKPDNHEEETLXVLKNNVHGL 839
G + RR+ G P V YL+ +R FR R+ L+ D ++EE + N +
Sbjct: 582 GTRNFHPRRLLLTGPPQVGKTGSYLQFLRILFRMLIRL-LEVDVYDEEEINTDHNESSEV 640
Query: 840 GNISGERIWGELKKF 884
GE W +++ F
Sbjct: 641 SQSEGEP-WPDIESF 654
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,235,394
Number of Sequences: 237096
Number of extensions: 2323046
Number of successful extensions: 3788
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3785
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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