Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E03
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058485-1|AAL13714.1|  477|Drosophila melanogaster GM13341p pro...   350   2e-96
AE014297-338|AAF51964.1|  477|Drosophila melanogaster CG2100-PA ...   350   2e-96
BT003554-1|AAO39558.1|  307|Drosophila melanogaster LP10544p pro...   176   4e-44
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    31   1.6  
BT030442-1|ABP87884.1|  820|Drosophila melanogaster FI01201p pro...    31   1.6  
BT011491-1|AAR99149.1|  820|Drosophila melanogaster GM05638p pro...    31   1.6  
AJ133756-1|CAB51359.1|  820|Drosophila melanogaster jim zinc fin...    31   1.6  
AE014296-3720|AAX52769.1|  820|Drosophila melanogaster CG11352-P...    31   1.6  
AE014296-3719|AAF51862.1|  820|Drosophila melanogaster CG11352-P...    31   1.6  
AE014296-3718|AAN12203.1|  820|Drosophila melanogaster CG11352-P...    31   1.6  
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    31   1.6  
AY122157-1|AAM52669.1|  780|Drosophila melanogaster LD10695p pro...    30   4.9  
AE014135-124|AAF59321.1|  767|Drosophila melanogaster CG1783-PA ...    30   4.9  
AY069413-1|AAL39558.1|  420|Drosophila melanogaster LD11027p pro...    29   8.6  
AE014134-543|AAN10406.1|  420|Drosophila melanogaster CG17257-PB...    29   8.6  
AE014134-542|AAF51157.2|  420|Drosophila melanogaster CG17257-PA...    29   8.6  

>AY058485-1|AAL13714.1|  477|Drosophila melanogaster GM13341p
           protein.
          Length = 477

 Score =  350 bits (860), Expect = 2e-96
 Identities = 158/224 (70%), Positives = 189/224 (84%)
 Frame = +3

Query: 210 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 389
           + R NP   KV +PEFKSIFT E+ DL  +F KY +E+RIAGGAVRD+LMG+ PKD+D A
Sbjct: 53  RMRTNPAFRKVATPEFKSIFTPELNDLVALFKKYDYELRIAGGAVRDILMGIPPKDIDLA 112

Query: 390 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 569
           TTATP++MK+MF  EEVRMIN NGE+HGTIT RINDKENFEVTTLRID+ TDGR A+V +
Sbjct: 113 TTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDIRTDGRHAEVMY 172

Query: 570 TKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMR 749
           T DW+LDANRRDLTINSMFLGFDG+VYDYFYGY+DLQ+RRV FVG+ D+R+KED+LRI+R
Sbjct: 173 TTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDDLQERRVVFVGEADIRIKEDFLRILR 232

Query: 750 YFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
           YFRFYGRIA + +NH++ TL  +K N  GL  ISGERIW EL+K
Sbjct: 233 YFRFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQK 276


>AE014297-338|AAF51964.1|  477|Drosophila melanogaster CG2100-PA
           protein.
          Length = 477

 Score =  350 bits (860), Expect = 2e-96
 Identities = 158/224 (70%), Positives = 189/224 (84%)
 Frame = +3

Query: 210 KCRENPIVIKVDSPEFKSIFTEEVIDLKKIFDKYKHEIRIAGGAVRDLLMGLTPKDLDFA 389
           + R NP   KV +PEFKSIFT E+ DL  +F KY +E+RIAGGAVRD+LMG+ PKD+D A
Sbjct: 53  RMRTNPAFRKVATPEFKSIFTPELNDLVALFKKYDYELRIAGGAVRDILMGIPPKDIDLA 112

Query: 390 TTATPEEMKEMFTAEEVRMINVNGERHGTITARINDKENFEVTTLRIDMVTDGRFADVQF 569
           TTATP++MK+MF  EEVRMIN NGE+HGTIT RINDKENFEVTTLRID+ TDGR A+V +
Sbjct: 113 TTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDIRTDGRHAEVMY 172

Query: 570 TKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIMR 749
           T DW+LDANRRDLTINSMFLGFDG+VYDYFYGY+DLQ+RRV FVG+ D+R+KED+LRI+R
Sbjct: 173 TTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDDLQERRVVFVGEADIRIKEDFLRILR 232

Query: 750 YFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
           YFRFYGRIA + +NH++ TL  +K N  GL  ISGERIW EL+K
Sbjct: 233 YFRFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQK 276


>BT003554-1|AAO39558.1|  307|Drosophila melanogaster LP10544p
           protein.
          Length = 307

 Score =  176 bits (428), Expect = 4e-44
 Identities = 75/105 (71%), Positives = 91/105 (86%)
 Frame = +3

Query: 567 FTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLQKRRVAFVGDPDVRVKEDYLRIM 746
           +T DW+LDANRRDLTINSMFLGFDG+VYDYFYGY+DLQ+RRV FVG+ D+R+KED+LRI+
Sbjct: 2   YTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDDLQERRVVFVGEADIRIKEDFLRIL 61

Query: 747 RYFRFYGRIALKPDNHEEETLXVLKNNVHGLGNISGERIWGELKK 881
           RYFRFYGRIA + +NH++ TL  +K N  GL  ISGERIW EL+K
Sbjct: 62  RYFRFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQK 106


>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = -3

Query: 313  LYLSKIFFRSITSSVNILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLHVPLSWK 134
            +Y S I   +I      L  +G++   +IG    F F+ + D N  R GS+  +V + +K
Sbjct: 1195 IYGSSIHL-TIADQSYALKTNGKAAAWSIGSDGSFNFQKLADSNSARAGSLVENVEIQYK 1253

Query: 133  NCPTPKI-LLHALNITKKKFQIKVAK 59
            N     I ++   ++ K    +++++
Sbjct: 1254 NKQVGGIKIMSNFDVNKMDVDVEISR 1279


>BT030442-1|ABP87884.1|  820|Drosophila melanogaster FI01201p
           protein.
          Length = 820

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = -3

Query: 319 SCLYLSKIFFRSITSSVNILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLHVPLS 140
           +C Y S+ F +    + +I ++SGE         +HF+ K+I ++++     V+ H  L 
Sbjct: 386 TCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPH--LI 443

Query: 139 WKNCPTPKI 113
           +KN P P +
Sbjct: 444 FKNGPHPTL 452


>BT011491-1|AAR99149.1|  820|Drosophila melanogaster GM05638p
           protein.
          Length = 820

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = -3

Query: 319 SCLYLSKIFFRSITSSVNILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLHVPLS 140
           +C Y S+ F +    + +I ++SGE         +HF+ K+I ++++     V+ H  L 
Sbjct: 386 TCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPH--LI 443

Query: 139 WKNCPTPKI 113
           +KN P P +
Sbjct: 444 FKNGPHPTL 452


>AJ133756-1|CAB51359.1|  820|Drosophila melanogaster jim zinc finger
           protein protein.
          Length = 820

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = -3

Query: 319 SCLYLSKIFFRSITSSVNILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLHVPLS 140
           +C Y S+ F +    + +I ++SGE         +HF+ K+I ++++     V+ H  L 
Sbjct: 386 TCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPH--LI 443

Query: 139 WKNCPTPKI 113
           +KN P P +
Sbjct: 444 FKNGPHPTL 452


>AE014296-3720|AAX52769.1|  820|Drosophila melanogaster CG11352-PD,
           isoform D protein.
          Length = 820

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = -3

Query: 319 SCLYLSKIFFRSITSSVNILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLHVPLS 140
           +C Y S+ F +    + +I ++SGE         +HF+ K+I ++++     V+ H  L 
Sbjct: 386 TCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPH--LI 443

Query: 139 WKNCPTPKI 113
           +KN P P +
Sbjct: 444 FKNGPHPTL 452


>AE014296-3719|AAF51862.1|  820|Drosophila melanogaster CG11352-PC,
           isoform C protein.
          Length = 820

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = -3

Query: 319 SCLYLSKIFFRSITSSVNILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLHVPLS 140
           +C Y S+ F +    + +I ++SGE         +HF+ K+I ++++     V+ H  L 
Sbjct: 386 TCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPH--LI 443

Query: 139 WKNCPTPKI 113
           +KN P P +
Sbjct: 444 FKNGPHPTL 452


>AE014296-3718|AAN12203.1|  820|Drosophila melanogaster CG11352-PB,
           isoform B protein.
          Length = 820

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = -3

Query: 319 SCLYLSKIFFRSITSSVNILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLHVPLS 140
           +C Y S+ F +    + +I ++SGE         +HF+ K+I ++++     V+ H  L 
Sbjct: 386 TCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPH--LI 443

Query: 139 WKNCPTPKI 113
           +KN P P +
Sbjct: 444 FKNGPHPTL 452


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = -3

Query: 313  LYLSKIFFRSITSSVNILLNSGESTLITIGFSRHFKFKSIFDRNLLRLGSVTLHVPLSWK 134
            +Y S I   +I      L  +G++   +IG    F F+ + D N  R GS+  +V + +K
Sbjct: 1195 IYGSSIHL-TIADQSYALKTNGKAAAWSIGSDGSFNFQKLADSNSARAGSLVENVEIQYK 1253

Query: 133  NCPTPKI-LLHALNITKKKFQIKVAK 59
            N     I ++   ++ K    +++++
Sbjct: 1254 NKQVGGIKIMSNFDVNKMDVDVEISR 1279


>AY122157-1|AAM52669.1|  780|Drosophila melanogaster LD10695p
           protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 96  LSACKRILGVGQFFQLRGTCSVTDPSRRRFRSKMDLNLKCRENPIVIKVDSPEFKSIFTE 275
           +S   R   V +F Q + T  V    RR+  + +DL LK   N  + KVD+P   S+ T+
Sbjct: 33  ISHLSRYEAVQKFLQSKETLVVE--IRRQKHNALDLELKHGSNAKISKVDNPGELSVLTD 90

Query: 276 E 278
           +
Sbjct: 91  K 91


>AE014135-124|AAF59321.1|  767|Drosophila melanogaster CG1783-PA
           protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 96  LSACKRILGVGQFFQLRGTCSVTDPSRRRFRSKMDLNLKCRENPIVIKVDSPEFKSIFTE 275
           +S   R   V +F Q + T  V    RR+  + +DL LK   N  + KVD+P   S+ T+
Sbjct: 20  ISHLSRYEAVQKFLQSKETLVVE--IRRQKHNALDLELKHGSNAKISKVDNPGELSVLTD 77

Query: 276 E 278
           +
Sbjct: 78  K 78


>AY069413-1|AAL39558.1|  420|Drosophila melanogaster LD11027p
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 90  QKRNSKSKWLNCCISHVNL*KFSYYVIG 7
           ++R+  S WLNCCI   N   + +Y++G
Sbjct: 290 KRRDHHSYWLNCCIGERN---YVWYIVG 314


>AE014134-543|AAN10406.1|  420|Drosophila melanogaster CG17257-PB,
           isoform B protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 90  QKRNSKSKWLNCCISHVNL*KFSYYVIG 7
           ++R+  S WLNCCI   N   + +Y++G
Sbjct: 290 KRRDHHSYWLNCCIGERN---YVWYIVG 314


>AE014134-542|AAF51157.2|  420|Drosophila melanogaster CG17257-PA,
           isoform A protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 90  QKRNSKSKWLNCCISHVNL*KFSYYVIG 7
           ++R+  S WLNCCI   N   + +Y++G
Sbjct: 290 KRRDHHSYWLNCCIGERN---YVWYIVG 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,249,192
Number of Sequences: 53049
Number of extensions: 699788
Number of successful extensions: 2029
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)