Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_E02
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.4  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   5.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.8  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   7.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   7.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   7.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   7.6  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 681 HGHDQSRDDDEGKSWRRQPQQLLAE 607
           HGHD  +D+D  +     P  +  E
Sbjct: 706 HGHDSGQDEDMAEDLSMAPDIMTPE 730


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 14/69 (20%), Positives = 26/69 (37%)
 Frame = -2

Query: 771 ERGEALQGRRPHRQVLVATPHNXNAVAFNYHGHDQSRDDDEGKSWRRQPQQLLAEGNATG 592
           E+ + +Q ++ H+Q    T H  NA         Q +   + +  ++Q Q    E     
Sbjct: 413 EQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQHWPMEEEPAA 472

Query: 591 LRNQGMDLT 565
                 D+T
Sbjct: 473 SWGSASDVT 481


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +3

Query: 576 CLDCGDPSRSLPRGVA--AAAGASSCLR 653
           CL CGD       G+A  +A G   C +
Sbjct: 36  CLGCGDSCHKCKYGIAMSSACGIVQCAK 63


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = -2

Query: 627 PQQLLAEGNATGLRNQGMDLTQVTQIASCRQNGDSKVEDLKTEE 496
           P  ++A  NAT     G       ++   RQN     +D   +E
Sbjct: 241 PSAVVATSNATAAMTTGTTTIPTRRLRKRRQNDGEGADDRDDDE 284


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 430 YPGILGCGH 404
           YPG L CGH
Sbjct: 31  YPGTLWCGH 39


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 430 YPGILGCGH 404
           YPG L CGH
Sbjct: 36  YPGTLWCGH 44


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 156 LLLSTCSDWHNYPGIMAP 209
           LL+ST   W N+  ++AP
Sbjct: 126 LLISTGQKWRNHRKLIAP 143


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 186 NYPGIMAPFPAPSGTRSFSSDCA*SSI 266
           +YPG  +  P+PS   SF S  + +S+
Sbjct: 82  SYPGGGSSSPSPSSPSSFFSSVSPTSL 108


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 430 YPGILGCGH 404
           YPG L CGH
Sbjct: 36  YPGTLWCGH 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,635
Number of Sequences: 438
Number of extensions: 5057
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)