Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_D24
         (919 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052040-1|AAK93464.1|  641|Drosophila melanogaster LP05054p pro...   164   2e-40
AE014134-711|AAF51035.2|  641|Drosophila melanogaster CG3702-PA ...   164   2e-40
AY051848-1|AAK93272.1|  480|Drosophila melanogaster LD35087p pro...    34   0.31 
AE014298-2920|AAF49009.1|  480|Drosophila melanogaster CG14232-P...    34   0.31 
AE013599-472|AAF59215.4|  430|Drosophila melanogaster CG1339-PA ...    30   3.9  
AY122166-1|AAM52678.1|  653|Drosophila melanogaster LD24507p pro...    30   5.1  
AL021726-4|CAA16808.1|  449|Drosophila melanogaster EG:171E4.3 p...    30   5.1  
AE014298-243|AAF45655.2| 1234|Drosophila melanogaster CG32809-PD...    30   5.1  

>AY052040-1|AAK93464.1|  641|Drosophila melanogaster LP05054p
           protein.
          Length = 641

 Score =  164 bits (398), Expect = 2e-40
 Identities = 91/241 (37%), Positives = 134/241 (55%), Gaps = 7/241 (2%)
 Frame = +3

Query: 216 SVVAADDNLDINARVEEERRRM----QPTKLESFFAITKSLIIRALVVYFITSMFRQPS- 380
           +V+A + N ++     +  ++     QPT++ESFFA+TKSLI+RAL++YF++S FR+P+ 
Sbjct: 14  AVIAGNGNAELAQNEGQNEQQQPPPNQPTRMESFFAMTKSLILRALIIYFVSSFFRRPAP 73

Query: 381 -APKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFDN-SNLIWQHSGLVYGD 554
            A     +  ++ P+  A N F NGT  D++ +LSE     NF   +NL+W    L YGD
Sbjct: 74  DAASQGKSVANAGPKITAWNYFENGTDFDLHVWLSENPDVVNFQQKANLLWLQKDLTYGD 133

Query: 555 WYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQNFAGPYISVEXX 734
           W SG NGDG Y+HS  +  S  L NNGS+YLH ++  +G SPDP    N+A   +  +  
Sbjct: 134 WTSGVNGDGIYTHSLKLKTSQHLMNNGSVYLHAFVTRTGMSPDP-KAPNYA-TKMGHQQH 191

Query: 735 XXXXXXXXXXXXXXXXXXGQTEKSEEEIKKAETVKEEXVSHXHPNLTINWVMTKQIGVXG 914
                              + EK E E+K A  +K+  VSH HPNLT+N V+ +     G
Sbjct: 192 QLNKFKKLRVNRNYNLLASEKEKLEHELKHA-NLKDTIVSHWHPNLTVNLVVDQTNWAEG 250

Query: 915 S 917
           S
Sbjct: 251 S 251


>AE014134-711|AAF51035.2|  641|Drosophila melanogaster CG3702-PA
           protein.
          Length = 641

 Score =  164 bits (398), Expect = 2e-40
 Identities = 91/241 (37%), Positives = 134/241 (55%), Gaps = 7/241 (2%)
 Frame = +3

Query: 216 SVVAADDNLDINARVEEERRRM----QPTKLESFFAITKSLIIRALVVYFITSMFRQPS- 380
           +V+A + N ++     +  ++     QPT++ESFFA+TKSLI+RAL++YF++S FR+P+ 
Sbjct: 14  AVIAGNGNAELAQNEGQNEQQQPPPNQPTRMESFFAMTKSLILRALIIYFVSSFFRRPAP 73

Query: 381 -APKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFDN-SNLIWQHSGLVYGD 554
            A     +  ++ P+  A N F NGT  D++ +LSE     NF   +NL+W    L YGD
Sbjct: 74  DAASQGKSVANAGPKITAWNYFENGTDFDLHVWLSENPDVVNFQQKANLLWLQKDLTYGD 133

Query: 555 WYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQNFAGPYISVEXX 734
           W SG NGDG Y+HS  +  S  L NNGS+YLH ++  +G SPDP    N+A   +  +  
Sbjct: 134 WTSGVNGDGIYTHSLKLKTSQHLMNNGSVYLHAFVTRTGMSPDP-KAPNYA-TKMGHQQH 191

Query: 735 XXXXXXXXXXXXXXXXXXGQTEKSEEEIKKAETVKEEXVSHXHPNLTINWVMTKQIGVXG 914
                              + EK E E+K A  +K+  VSH HPNLT+N V+ +     G
Sbjct: 192 QLNKFKKLRVNRNYNLLASEKEKLEHELKHA-NLKDTIVSHWHPNLTVNLVVDQTNWAEG 250

Query: 915 S 917
           S
Sbjct: 251 S 251


>AY051848-1|AAK93272.1|  480|Drosophila melanogaster LD35087p
           protein.
          Length = 480

 Score = 33.9 bits (74), Expect = 0.31
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = +3

Query: 396 INNPSSAPRAPA---VNMFA----NGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVYGD 554
           +NNP++AP+AP    V ++     N   +  + Y  E  +   FDNS  IW++  L Y  
Sbjct: 417 VNNPTAAPKAPISIIVPIYRRECYNEVYVGSHSYPGEGVYLLKFDNSYSIWRNKTLYYRV 476

Query: 555 WY 560
           +Y
Sbjct: 477 YY 478


>AE014298-2920|AAF49009.1|  480|Drosophila melanogaster CG14232-PA
           protein.
          Length = 480

 Score = 33.9 bits (74), Expect = 0.31
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = +3

Query: 396 INNPSSAPRAPA---VNMFA----NGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVYGD 554
           +NNP++AP+AP    V ++     N   +  + Y  E  +   FDNS  IW++  L Y  
Sbjct: 417 VNNPTAAPKAPISIIVPIYRRECYNEVYVGSHSYPGEGVYLLKFDNSYSIWRNKTLYYRV 476

Query: 555 WY 560
           +Y
Sbjct: 477 YY 478


>AE013599-472|AAF59215.4|  430|Drosophila melanogaster CG1339-PA
           protein.
          Length = 430

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 88  YCMT*RYFIYNNIMLHWFKIICRYLRRYV 2
           YC    YFIY  I+L W+  I  +L+R++
Sbjct: 206 YCFA-GYFIYQLILLSWYHTIILFLQRFI 233


>AY122166-1|AAM52678.1|  653|Drosophila melanogaster LD24507p
           protein.
          Length = 653

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 21/86 (24%), Positives = 35/86 (40%)
 Frame = +3

Query: 369 RQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVY 548
           R P A  T  N P +   A  VN+  N    +     +    +    N  ++ + + +V 
Sbjct: 415 RSPLASPTSPNVPPNQAAAATVNLIPNSN-SNASANANANANSNATGNKGIVGETTSVVS 473

Query: 549 GDWYSGPNGDGSYSHSASITPSFALK 626
           GD  SG N  G+ S +  +    AL+
Sbjct: 474 GDTSSGDNSSGNESGNDHVQRQVALE 499


>AL021726-4|CAA16808.1|  449|Drosophila melanogaster EG:171E4.3
           protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 21/86 (24%), Positives = 35/86 (40%)
 Frame = +3

Query: 369 RQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVY 548
           R P A  T  N P +   A  VN+  N    +     +    +    N  ++ + + +V 
Sbjct: 211 RSPLASPTSPNVPPNQAAAATVNLIPNSN-SNASANANANANSNATGNKGIVGETTSVVS 269

Query: 549 GDWYSGPNGDGSYSHSASITPSFALK 626
           GD  SG N  G+ S +  +    AL+
Sbjct: 270 GDTSSGDNSSGNESGNDHVQRQVALE 295


>AE014298-243|AAF45655.2| 1234|Drosophila melanogaster CG32809-PD,
            isoform D protein.
          Length = 1234

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 21/86 (24%), Positives = 35/86 (40%)
 Frame = +3

Query: 369  RQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVY 548
            R P A  T  N P +   A  VN+  N    +     +    +    N  ++ + + +V 
Sbjct: 996  RSPLASPTSPNVPPNQAAAATVNLIPNSN-SNASANANANANSNATGNKGIVGETTSVVS 1054

Query: 549  GDWYSGPNGDGSYSHSASITPSFALK 626
            GD  SG N  G+ S +  +    AL+
Sbjct: 1055 GDTSSGDNSSGNESGNDHVQRQVALE 1080


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,310,835
Number of Sequences: 53049
Number of extensions: 702362
Number of successful extensions: 1697
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)