Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_D22
         (368 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   0.32 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   1.7  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   4.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   7.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   7.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   9.2  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.32
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +2

Query: 26  PKRLELLGKYGTR-YGASLRKMVKKMEVTQHAKYTCSFCGK 145
           PKR + + KY  R +  S   ++ +   T    Y+C  CGK
Sbjct: 76  PKR-QFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 62  VCHICQVIPTFLV 24
           +CHIC++   FLV
Sbjct: 113 ICHICELHTIFLV 125


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +3

Query: 156 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 293
           +V+V   GLV     +   + GY   L  +  D+ +  + +  ++N
Sbjct: 8   SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +3

Query: 156 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 293
           +V+V   GLV     +   + GY   L  +  D+ +  + +  ++N
Sbjct: 8   SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +3

Query: 156 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 293
           +V+V   GLV     +   + GY   L  +  D+ +  + +  ++N
Sbjct: 8   SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 81  VKWSKRWK*PNTQSI 125
           +KW K  K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 81  VKWSKRWK*PNTQSI 125
           +KW K  K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 71  HRNVCHICQV 42
           H  +C++CQV
Sbjct: 218 HNELCNLCQV 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,356
Number of Sequences: 336
Number of extensions: 1721
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)