Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_D15
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   1.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   1.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   1.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   7.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   7.3  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -3

Query: 257 AHFLTSPTWRQLHF*QLSSTPLVYFSFFLVTHKTSIL 147
           A F    T  QL + Q++ TP+++ +  L+T+   ++
Sbjct: 148 AKFKNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVI 184


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -3

Query: 257 AHFLTSPTWRQLHF*QLSSTPLVYFSFFLVTHKTSIL 147
           A F    T  QL + Q++ TP+++ +  L+T+   ++
Sbjct: 148 AKFKNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVI 184


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 264 QKCDLSLVRSCYPRASLQRHPHSRHLRRQ 350
           +KCDL     C  R  LQ    S+H  R+
Sbjct: 82  EKCDLPFNIDCTSRPKLQEPQPSQHCPRK 110


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 91  PKRQRSQTEPSSNLKKSAEFHVNIHTHR 8
           PKRQR+       L+   EFH N +  R
Sbjct: 233 PKRQRTAYTRHQILELEKEFHYNRYLTR 260


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 91  PKRQRSQTEPSSNLKKSAEFHVNIHTHR 8
           PKRQR+       L+   EFH N +  R
Sbjct: 233 PKRQRTAYTRHQILELEKEFHYNRYLTR 260


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 91  PKRQRSQTEPSSNLKKSAEFHVNIHTHR 8
           PKRQR+       L+   EFH N +  R
Sbjct: 233 PKRQRTAYTRHQILELEKEFHYNRYLTR 260


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 124 TRLAKTK*YEVPKRQRSQTEPSSNLKKSAEFHVNIHTHRP 5
           TR +  +   +P+R R+    +  L+   EFH N +  RP
Sbjct: 124 TRKSSQQENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRP 163


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 637 SVGIHLFSYKGTLGRPSPMIGGRIVAFDPP 548
           SVG++   Y  T   P P IG    AF  P
Sbjct: 6   SVGVYGAPYPSTDQNPYPSIGVESSAFYSP 35


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
          transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 94 VPKRQRSQTEPSSNLKKSAEFHVNIHTHRP 5
          +P+R R+    +  L+   EFH N +  RP
Sbjct: 3  LPRRLRTAYTNTQLLELEKEFHFNKYLCRP 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,403
Number of Sequences: 336
Number of extensions: 3998
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)