Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_D14
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p pro...   128   7e-30
AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl pyr...   128   7e-30
AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p pro...   128   7e-30
AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-P...   128   7e-30
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P...    33   0.49 
AY071599-1|AAL49221.1|  338|Drosophila melanogaster RE65121p pro...    29   8.0  
AF049659-1|AAC05273.1|  338|Drosophila melanogaster geranylgeran...    29   8.0  
AE014296-1239|AAF50574.1|  338|Drosophila melanogaster CG8593-PA...    29   8.0  

>AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p
           protein.
          Length = 419

 Score =  128 bits (310), Expect = 7e-30
 Identities = 57/157 (36%), Positives = 95/157 (60%)
 Frame = +1

Query: 355 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 534
           +E + F  + P+++  +   +K         W  ++L YN+  GK  RGI TV++YK + 
Sbjct: 82  DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141

Query: 535 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 714
             + +T   +K+A  LGWCVEM Q++ I+ DD+MD S+ RRG PCW++   VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200

Query: 715 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWSTS 825
           +L+I ++++  LK +F     Y+ + ELF+E  + T+
Sbjct: 201 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 237


>AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl
           pyrophosphate synthase protein.
          Length = 380

 Score =  128 bits (310), Expect = 7e-30
 Identities = 57/157 (36%), Positives = 95/157 (60%)
 Frame = +1

Query: 355 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 534
           +E + F  + P+++  +   +K         W  ++L YN+  GK  RGI TV++YK + 
Sbjct: 43  DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 102

Query: 535 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 714
             + +T   +K+A  LGWCVEM Q++ I+ DD+MD S+ RRG PCW++   VG+T A ND
Sbjct: 103 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 161

Query: 715 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWSTS 825
           +L+I ++++  LK +F     Y+ + ELF+E  + T+
Sbjct: 162 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 198


>AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p
           protein.
          Length = 419

 Score =  128 bits (310), Expect = 7e-30
 Identities = 57/157 (36%), Positives = 95/157 (60%)
 Frame = +1

Query: 355 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 534
           +E + F  + P+++  +   +K         W  ++L YN+  GK  RGI TV++YK + 
Sbjct: 82  DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141

Query: 535 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 714
             + +T   +K+A  LGWCVEM Q++ I+ DD+MD S+ RRG PCW++   VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200

Query: 715 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWSTS 825
           +L+I ++++  LK +F     Y+ + ELF+E  + T+
Sbjct: 201 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 237


>AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-PA
           protein.
          Length = 419

 Score =  128 bits (310), Expect = 7e-30
 Identities = 57/157 (36%), Positives = 95/157 (60%)
 Frame = +1

Query: 355 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 534
           +E + F  + P+++  +   +K         W  ++L YN+  GK  RGI TV++YK + 
Sbjct: 82  DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141

Query: 535 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 714
             + +T   +K+A  LGWCVEM Q++ I+ DD+MD S+ RRG PCW++   VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200

Query: 715 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWSTS 825
           +L+I ++++  LK +F     Y+ + ELF+E  + T+
Sbjct: 201 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 237


>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
            protein.
          Length = 4899

 Score = 33.1 bits (72), Expect = 0.49
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -3

Query: 776  LGLVLKLVFRNSNKELCIKRESLKAHVMPTSGRRYQQGMPRRTLEPSIMSSSTMQYA*NI 597
            +G ++++ F     EL +K+ SL+A +MPT  +  Q  +    +  + +   T+  A + 
Sbjct: 2517 IGQIMEMGFTRRTVELALKQLSLQAEIMPTPEQIVQWILEHPDVCANTIEEDTLPLASSA 2576

Query: 596  STHHP 582
            S+H P
Sbjct: 2577 SSHDP 2581


>AY071599-1|AAL49221.1|  338|Drosophila melanogaster RE65121p
           protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 577 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 666
           ++G  V+M     +++DDI D S +RRG+P
Sbjct: 60  QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89


>AF049659-1|AAC05273.1|  338|Drosophila melanogaster geranylgeranyl
           pyrophosphate synthaseprotein.
          Length = 338

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 577 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 666
           ++G  V+M     +++DDI D S +RRG+P
Sbjct: 60  QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89


>AE014296-1239|AAF50574.1|  338|Drosophila melanogaster CG8593-PA
           protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 577 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 666
           ++G  V+M     +++DDI D S +RRG+P
Sbjct: 60  QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,288,889
Number of Sequences: 53049
Number of extensions: 825077
Number of successful extensions: 1993
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)