Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_D12
         (727 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HR71 Cluster: Uncharacterized polypeptide; n=2; Culic...    56   9e-07
UniRef50_UPI0000DB6C6F Cluster: PREDICTED: hypothetical protein;...    41   0.036
UniRef50_A1Z7L4 Cluster: CG33199-PA, isoform A; n=4; Sophophora|...    38   0.33 
UniRef50_UPI00015B4594 Cluster: PREDICTED: hypothetical protein;...    36   0.77 
UniRef50_Q0LC84 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_Q1HR71 Cluster: Uncharacterized polypeptide; n=2;
           Culicidae|Rep: Uncharacterized polypeptide - Aedes
           aegypti (Yellowfever mosquito)
          Length = 63

 Score = 56.0 bits (129), Expect = 9e-07
 Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
 Frame = +3

Query: 150 MKTTQVAQYALRLTYSQ-------QANREKMMTRSALLLATIGLGLSTFSVRQMILNQSR 308
           MKTTQ+A+YA+RL Y Q         + ++   RSA LLA +G+GLS+FS++QM+  Q +
Sbjct: 1   MKTTQIARYAIRLNYGQVNEFAAGSKSSDRTTVRSAALLAALGIGLSSFSMKQMLTKQPK 60

Query: 309 R 311
           R
Sbjct: 61  R 61


>UniRef50_UPI0000DB6C6F Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 151

 Score = 40.7 bits (91), Expect = 0.036
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
 Frame = +3

Query: 150 MKTTQVAQYALRLTYSQ-------QANR-EKMMTRSALLLATIGLGLSTFSVRQMILNQS 305
           M  T    YALRL+  Q       + N  E+ MT+SA +LAT+GL +S FSVR+M+ ++ 
Sbjct: 88  MYLTPATLYALRLSLQQGTVSSVFRRNMVERNMTKSAYILATVGLSMSIFSVRKMLTSKH 147

Query: 306 RR 311
            R
Sbjct: 148 GR 149


>UniRef50_A1Z7L4 Cluster: CG33199-PA, isoform A; n=4;
           Sophophora|Rep: CG33199-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 79

 Score = 37.5 bits (83), Expect = 0.33
 Identities = 18/65 (27%), Positives = 36/65 (55%)
 Frame = +3

Query: 114 LYIICI*FGSDIMKTTQVAQYALRLTYSQQANREKMMTRSALLLATIGLGLSTFSVRQMI 293
           LY   + FG     +TQ   +      +  ++  +++TRSA +LA  G+ LS+FS++Q++
Sbjct: 8   LYAFRLTFGQAPTLSTQATTHCSHGFTTSSSSPNRVVTRSATMLALFGIALSSFSLKQLL 67

Query: 294 LNQSR 308
             + +
Sbjct: 68  AKKQK 72


>UniRef50_UPI00015B4594 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 70

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
 Frame = +3

Query: 150 MKTTQVAQYALRLTYSQQA---------NREKMMTRSALLLATIGLGLSTFSVRQM 290
           M  T+ AQYALRL+ +Q A         N     T SA++LAT GL +S FS+ QM
Sbjct: 1   MYLTRTAQYALRLSLTQPAGPAAPVFRRNSVDRGTASAVVLATAGLSMSMFSLVQM 56


>UniRef50_Q0LC84 Cluster: Putative uncharacterized protein; n=1;
           Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
           uncharacterized protein - Herpetosiphon aurantiacus ATCC
           23779
          Length = 163

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 188 HIFAASEP*EDDDTVRSTPSHHRSRPVHV*RTPDDPQPV*TRLGQTSTPRTTRRSK 355
           H  A  +P  DDD+  +T +  + R V + RTPDD      R+    TPR  + S+
Sbjct: 53  HYLARPKPQFDDDSDENTAAQSKPRHVVLFRTPDDALSFAQRIRIGETPRVRQISR 108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,001,552
Number of Sequences: 1657284
Number of extensions: 12062640
Number of successful extensions: 25735
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25728
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)