Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_D11
         (917 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    58   3e-10
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    26   1.4  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    25   3.2  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   7.4  
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    23   9.8  
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    23   9.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.8  

>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 58.4 bits (135), Expect = 3e-10
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = +1

Query: 88  RPNIIFFLADDLG-WNDVGFHGSNQIPTPNLDSLGVSGLMLHNYYTSP-ICSPSRAALMT 261
           +PN++  + DD     + G+   N I T N+D L   G    N +    +C+PSR +++T
Sbjct: 30  QPNVLLIILDDFRPVINYGYGDGNAI-TVNIDRLVQQGFFFQNAFAQQALCAPSRNSMLT 88

Query: 262 GKYPIHTGMQHSVIYGAEPRGLPLNEKILPQYLKDLGYKTHLVGK-WHLGS 411
           G+ P    +     Y  +  G   N   LPQY K  GY+TH VGK +H G+
Sbjct: 89  GRRPDTVRLYDFYSYWRQTSG---NYTTLPQYFKQHGYRTHSVGKVFHPGA 136


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
 Frame = +1

Query: 67  LGVASATRPNIIFFLADDLGWNDV-----GFHGSNQIPTPNLDSLGVSGLMLHN-YYTSP 228
           +G+A+  +  ++F    DL W D+     GFH  N+       SLG+    L +  + S 
Sbjct: 545 VGLAAYDKALLLFNKNHDLFWEDIGQVFDGFHAINENEFDIFHSLGLFARTLDDILFDSA 604

Query: 229 ICSPSRAALMTGK 267
                R AL +GK
Sbjct: 605 NEKTGRNALQSGK 617


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 166 TPNLDSLGVSGLMLHNYYTSPICSPSRA 249
           TP  D++G +   LH+   SP+ SP  A
Sbjct: 60  TPPQDTVGTAQHQLHHQGHSPVASPHSA 87


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 102 NYIRSSSRRDTQYHNQH*PRHLFTETY 22
           NYI +  ++   +H+QH P+    + Y
Sbjct: 300 NYILAQQQQQQHHHHQHQPQQQHQQQY 326


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 189 TQRIQIRGRNLIGAVEADIVPAEIVRQKENYIR 91
           T  I IRGR L G V   IV   I R    +IR
Sbjct: 58  TGHISIRGRILTGVVRKCIVLLYIRRDYLQFIR 90


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 736 RRCT*RRLSASAGRGSVRKGCRC 668
           R CT +R + SA R S   GC C
Sbjct: 77  RTCTNQRKNDSACRRSCNPGCFC 99


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 493 GRTCRSFQSRNRRDYRTL 440
           GRT +SF   N RD R L
Sbjct: 567 GRTAKSFNRTNGRDMRCL 584


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,029,063
Number of Sequences: 2352
Number of extensions: 24320
Number of successful extensions: 65
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)