Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_D05
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    31   0.035
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    31   0.035
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    27   0.98 
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    27   0.98 
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    27   0.98 

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 31.5 bits (68), Expect = 0.035
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +1

Query: 244 RSHRLWC*MRLHRCEGCLAACGRERRAALSSTPRPLIRTKLLKRARRNPYSPPHATTKEH 423
           + H+ +C  R   CE C     R+R  AL +  R   +T+  +RA      PP      H
Sbjct: 54  KGHKRYCKYRTCHCEKCCLTAERQRVMALQTALR-RAQTQDEQRALNEGEVPPEPVANIH 112

Query: 424 FPAKMAE 444
            P K++E
Sbjct: 113 IP-KLSE 118


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 31.5 bits (68), Expect = 0.035
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +1

Query: 244 RSHRLWC*MRLHRCEGCLAACGRERRAALSSTPRPLIRTKLLKRARRNPYSPPHATTKEH 423
           + H+ +C  R   CE C     R+R  AL +  R   +T+  +RA      PP      H
Sbjct: 54  KGHKRYCKYRTCHCEKCCLTAERQRVMALQTALR-RAQTQDEQRALNEGEVPPEPVANIH 112

Query: 424 FPAKMAE 444
            P K++E
Sbjct: 113 IP-KLSE 118


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 26.6 bits (56), Expect = 0.98
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 726 LRSREPYEVQRA-PAASYRYVLHLQMNVPSPGLPVSRVPRQVSSYILQDFGLLVEFA 559
           L +RE  ++    PA  +       +N+P  G+ VSRV + +  YI+++    ++F+
Sbjct: 574 LSAREASQIDTLEPAKGFSPQTQQPVNLPLVGVAVSRVLKCIPEYIIENIVGYLQFS 630


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 0.98
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 244 RSHRLWC*MRLHRCEGCLAACGRERRAALSSTPRPLIRTKLLKRARRNPYSPP 402
           + H+ +C  R  +CE C     R+R  AL +  R   +T+  +RA      PP
Sbjct: 54  KGHKRYCKYRACQCEKCCLTAERQRVMALQTALR-RAQTQDEQRALNEGEVPP 105


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 26.6 bits (56), Expect = 0.98
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 244 RSHRLWC*MRLHRCEGCLAACGRERRAALSSTPRPLIRTKLLKRARRNPYSPP 402
           + H+ +C  R  +CE C     R+R  AL +  R   +T+  +RA      PP
Sbjct: 54  KGHKRYCKYRACQCEKCCLTAERQRVMALQTALR-RAQTQDEQRALNEGEVPP 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,167
Number of Sequences: 2352
Number of extensions: 13205
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)