Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_D04
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 14   NVTYVPTYISLFLQSNYLRFELLKILFQ-PISDVKLLQFIA 133
            N+TY+     + +   YL+ E + ++F    + + ++QF+A
Sbjct: 1304 NITYIEETSEVHISKEYLQLEPIGLVFVFFFALILVIQFVA 1344


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 14   NVTYVPTYISLFLQSNYLRFELLKILFQ-PISDVKLLQFIA 133
            N+TY+     + +   YL+ E + ++F    + + ++QF+A
Sbjct: 1304 NITYIEETSEVHISKEYLQLEPIGLVFVFFFALILVIQFVA 1344


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 287 SGEPTDIHPE 258
           +GEPTD+ PE
Sbjct: 218 TGEPTDLTPE 227


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 330 LCLLFLSSINEIRYLYIDYS 389
           LCL F S    + Y+Y  YS
Sbjct: 80  LCLPFYSYFFYLSYIYTTYS 99


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 330 LCLLFLSSINEIRYLYIDYS 389
           LCL F S    + Y+Y  YS
Sbjct: 36  LCLPFYSYFFYLSYIYTTYS 55


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 286 PENPPIFTRRTPPAHSNLQNTALSLDV 206
           P+N P FT  +      L+N A  L +
Sbjct: 735 PKNRPTFTELSKSLEGLLENVAQYLQI 761


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,959
Number of Sequences: 336
Number of extensions: 2045
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)