BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_D02
(845 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457557-1|AAL68787.1| 90|Anopheles gambiae hypothetical prote... 28 0.41
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 27 0.95
AF487534-1|AAL93295.1| 509|Anopheles gambiae cytochrome P450 CY... 26 1.7
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 6.7
CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply, Sphingosine... 23 8.8
>AF457557-1|AAL68787.1| 90|Anopheles gambiae hypothetical protein
10 protein.
Length = 90
Score = 27.9 bits (59), Expect = 0.41
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 496 KFISGETLGVIKWYWIVFTFEEESHHRKIIFCSSVL 389
+F+S T+G++ W + T E ++I C SVL
Sbjct: 2 RFLSVLTVGLLVWVGVFATVNAEDPRTELIGCGSVL 37
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 26.6 bits (56), Expect = 0.95
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 167 NTSTGSVELDEISFNKVINKFEASLVKFDVAFPYGDKHDAFVALAKDSKDVDELLIAEV 343
N ST + EL + + + F AS+ AFP+ D HD ++A+++ L +A V
Sbjct: 6 NLSTVTYELISGNVSAALENFTASMAG---AFPFEDLHDPASSIARNASFTLGLGLANV 61
>AF487534-1|AAL93295.1| 509|Anopheles gambiae cytochrome P450
CYP6P3 protein.
Length = 509
Score = 25.8 bits (54), Expect = 1.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 422 PQENYLL*LRTSLPIPRYLFHRNPSRRLQLSKVHPRL*SPSRVQQKH 282
P +++ RT + IP Y R+P + +P P V+++H
Sbjct: 394 PGTKHVIPKRTLVQIPAYAIQRDPDHYPDPERFNPDRFLPEEVKKRH 440
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.8 bits (49), Expect = 6.7
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -3
Query: 204 EISSNSTEPVDVFAREADSTAKNTTGTRKLRSIVLNEHN 88
E S NST + + + STA T+ +V + HN
Sbjct: 958 EHSVNSTNVTSINSSSSSSTADRNGDTKSRSPVVADGHN 996
>CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply,
Sphingosine-phosphate lyase protein.
Length = 519
Score = 23.4 bits (48), Expect = 8.8
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 182 SVELDEISFNKVINKFEASLVKFDVAFPYG--DKHDAFVALAK 304
+ E+D + + IN+ LV FPYG D +A AL +
Sbjct: 224 TTEVDIAAMERAINRNTVMLVGSAPNFPYGTMDDIEAIAALGR 266
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,772
Number of Sequences: 2352
Number of extensions: 13287
Number of successful extensions: 96
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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