Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_C24
         (936 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   4.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.0  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   6.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 646 QCPSQTGLTTRRKYAAADRRTRAHIGHQG 560
           QCP Q G T R ++ A +  T     H G
Sbjct: 220 QCPIQQGNTFRYQWIAGNAGTHFWHAHTG 248


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 646 QCPSQTGLTTRRKYAAADRRTRAHIGHQG 560
           QCP Q G T R ++ A +  T     H G
Sbjct: 220 QCPIQQGNTFRYQWIAGNAGTHFWHAHTG 248


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 780 EIGKKTTEIIHLKHGNGQVVRKDH 709
           +I    T +IH  H NG +V K+H
Sbjct: 190 KISNLNTSLIHSTHLNGDIV-KEH 212


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 748 MDNFRGLLSNLNLPLVDNFRQ 810
           MD+FRG   +   PL++  RQ
Sbjct: 861 MDDFRGSCGSGKYPLINAMRQ 881


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 554 IASAVFLYFLFLWMMCISKGRRISFNVCSDPLLFL 450
           I  AV LYF  L    +  G+  SFN  +  L+F+
Sbjct: 51  ILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFV 85


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -3

Query: 481 SMCAPILCCSCHP 443
           ++C  ++C +CHP
Sbjct: 4   AICFALMCIACHP 16


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,609
Number of Sequences: 336
Number of extensions: 5623
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26271982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)