Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_C24
(936 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0371 - 17020539-17020607,17020697-17020747,17020888-170210... 60 2e-09
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 58 1e-08
08_02_0970 - 23140109-23140192,23140604-23140657,23140783-231407... 54 2e-07
02_04_0092 + 19655747-19655825,19656362-19656567,19656990-196570... 51 2e-06
08_02_0711 + 20305341-20305859,20306278-20306448,20306995-203070... 50 2e-06
04_03_0863 + 20397161-20397239,20397464-20397672,20397768-203978... 48 8e-06
08_02_0714 + 20343864-20344385,20344928-20345098,20345933-203459... 47 2e-05
08_02_0710 + 20275834-20276352,20276970-20277140,20277692-202777... 47 2e-05
08_02_0967 - 23110154-23110240,23110620-23110673,23111010-231111... 45 8e-05
11_01_0330 + 2472195-2472743 38 0.011
08_02_0741 - 20618319-20618523,20618627-20618684,20618807-206191... 33 0.33
11_01_0329 + 2471015-2471075,2471152-2471432 31 1.00
03_02_0303 - 7261340-7261807 30 3.0
04_04_0427 + 25137036-25137119,25137687-25137826,25139775-251398... 29 4.0
03_01_0317 + 2492030-2492591,2493189-2493249,2493951-2494066,249... 29 4.0
02_05_0887 + 32516255-32517292 29 5.3
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 29 7.0
07_03_1633 - 28281825-28284005 28 9.3
07_03_1310 - 25673140-25673418,25673837-25674082,25674189-256744... 28 9.3
03_01_0256 - 1992298-1993878 28 9.3
01_05_0435 + 22117612-22117756,22118054-22118070,22119154-221192... 28 9.3
>09_04_0371 -
17020539-17020607,17020697-17020747,17020888-17021058,
17023296-17023404,17023570-17023676,17024429-17024640,
17024805-17024952
Length = 288
Score = 60.1 bits (139), Expect = 2e-09
Identities = 70/254 (27%), Positives = 100/254 (39%), Gaps = 20/254 (7%)
Frame = +1
Query: 136 GWGYRASDQRRWAVLHP---ACG-GRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLT 303
G+ A+ +W LH CG G++QSPI I+ + + P ++ Y+ G T
Sbjct: 57 GYENDATGPAKWGSLHKEWAVCGDGKKQSPIDITTVEPQKVKEPLMQ--AYK---AGATT 111
Query: 304 ITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLN 483
I N GH L S+ +G EY + +H+H SEHT+N
Sbjct: 112 IQNRGHDYMLKWKDGNSKLTVQG------------KEYTLKQVHWH------EPSEHTIN 153
Query: 484 DMRLPLEMHIIHRNKKYRNTAEA--MQHPDGLCVLAFFYQLPHTFSLSS-------ILSG 636
R EMH++H + + + G PH +L+ +
Sbjct: 154 GTRFDAEMHMVHEDPSMARAVVSVLLSTKAGQPNAVLTEMAPHFKNLAGKEKAEEEVKEP 213
Query: 637 LD-------TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLV 795
+D T +Y Y GSLTTPPC E V W I S S Q+D LL + +
Sbjct: 214 VDPSTWVDKTSGYYRYDGSLTTPPCTEGVIWTIMSKIGDASKEQID----LLKTVATTVE 269
Query: 796 DNFRQLQPLFGRRV 837
N R Q L R V
Sbjct: 270 PNARPAQKLNDRIV 283
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 58.0 bits (134), Expect = 1e-08
Identities = 76/248 (30%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Frame = +1
Query: 169 WAVLHPA---CG-GRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALT 336
W L P CG GR QSPI I+ + +P S ++ + +N TI N G + +
Sbjct: 223 WGKLSPEYRMCGEGRSQSPIDINTKTVVPRS--DLDTLD-RNYNAVNATIVNNGKDITM- 278
Query: 337 IPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHII 516
K+ E + I G P Y +H+H SEHT+N R PLE+H++
Sbjct: 279 --KFHGEVGQV-----IIAGKP----YRFQAIHWH------APSEHTINGRRFPLELHLV 321
Query: 517 HRNKK----------YRNTAEA---MQHPDGLCVLA-----FFYQLPHTFSLSSILSGLD 642
H++ Y+ A +Q D L L F + H + + L
Sbjct: 322 HKSDADGGLAVISVLYKLGAPDSFYLQFKDHLAELGADECDFSKEEAHVAAGLVQMRSLQ 381
Query: 643 --TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQ 816
T ++ Y GSLTTPPC E V W + IS Q+ LL + LP D R Q
Sbjct: 382 KRTGSYFRYGGSLTTPPCGENVVWSVLGKVREISQEQLH----LLMS-PLPTKD-ARPAQ 435
Query: 817 PLFGRRVF 840
PL GR VF
Sbjct: 436 PLNGRAVF 443
>08_02_0970 -
23140109-23140192,23140604-23140657,23140783-23140794,
23140842-23141009,23141371-23141473,23141574-23141680,
23143766-23143977,23144136-23144223
Length = 275
Score = 53.6 bits (123), Expect = 2e-07
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Frame = +1
Query: 415 YEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEA-----MQHPDGLCV 579
Y++ LH+H SEHT+N R +E+H++H + NTA + +PD +
Sbjct: 117 YKLKQLHWH------TPSEHTVNGRRYDMELHLVHDDGN-SNTAVIGNLYQIGNPDPFLL 169
Query: 580 LA--FFYQLPHTFSLSSILSGLDTER-------FYTYKGSLTTPPCAEAVTWVIFSDYL- 729
+ F ++ T S + +D + +Y Y GSLTTPPC E V W +F
Sbjct: 170 MLEPFIRRIADTKDKSEPIGVVDPQLAKSPDAVYYRYMGSLTTPPCTEGVIWTVFKRVFL 229
Query: 730 ---PISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGRRVFVRI 849
++ +Q+D R +++ +N R LQ + R + + I
Sbjct: 230 LAQTVAQYQLDLLREAVAD---GYENNARPLQKVNNRNISIFI 269
>02_04_0092 +
19655747-19655825,19656362-19656567,19656990-19657096,
19657189-19657291,19657699-19657881,19657972-19658094
Length = 266
Score = 50.8 bits (116), Expect = 2e-06
Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Frame = +1
Query: 412 EYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQH----PDGLCV 579
+Y++ LH+H SEHT+N R +E+H++H + T A+ + PD
Sbjct: 111 KYKLRQLHWH------SPSEHTINGQRFAVELHMVHHSDDGNITVIAVLYRHGKPDPFLF 164
Query: 580 -----LAFFY----------QLP-HTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWV 711
LA Y LP + + G D R++ Y GSLTTPPC E V W
Sbjct: 165 QIKDKLAALYLEGCKAEKGEPLPVGLVDMRELKKGAD--RYFRYVGSLTTPPCTENVIWN 222
Query: 712 IFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGRRV 837
IF + I + L + L+ N R QPL GR V
Sbjct: 223 IFGE---IREMTKEQAAALRAPLHGSYRHNRRPTQPLNGRTV 261
>08_02_0711 +
20305341-20305859,20306278-20306448,20306995-20307048,
20307389-20307475
Length = 276
Score = 50.4 bits (115), Expect = 2e-06
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Frame = +1
Query: 415 YEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFY 594
Y++ +H+H SEHT++ R +E+H++H N + + + + G F
Sbjct: 119 YQLRQMHWH------TPSEHTIDGRRYDMELHMVHLNAQNQAAVIGILYTIGTTPDEFLQ 172
Query: 595 QL-PHTFSLSS-------ILSGLDTE-------RFYTYKGSLTTPPCAEAVTWVIFSDYL 729
++ P+ ++S+ ++ G D +Y Y GS TTPPC E V W +
Sbjct: 173 KMEPYIIAISNQEGKEKMVVGGADPNVAKGKDTVYYRYMGSFTTPPCTEGVIWTVVRKVH 232
Query: 730 PISVFQMDNFRG--LLSNLN--LPLVD-NFRQLQPLF 825
+S+ Q+ + L+ N N PL D N R++ F
Sbjct: 233 TVSLSQITLLKAAVLMGNENNARPLQDVNNREIDLFF 269
>04_03_0863 +
20397161-20397239,20397464-20397672,20397768-20397874,
20397996-20398098,20398236-20398412,20398549-20398704
Length = 276
Score = 48.4 bits (110), Expect = 8e-06
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Frame = +1
Query: 412 EYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQH----PDGL-- 573
+Y + +H+H SEHT+N R PLE+H++H N+ T A + PD
Sbjct: 112 KYTLKQMHWH------SPSEHTINGFRFPLELHMVHTNENGNITVLAFLYRFGRPDPFFE 165
Query: 574 -----------CVLAFFYQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVI 714
C +P S+S + +Y Y GSLTTPPCAE V W I
Sbjct: 166 QDKLAALNAEGCKAEKGSPVP-AGSVSLLTMRQHVHIYYRYVGSLTTPPCAENVIWNI 222
>08_02_0714 +
20343864-20344385,20344928-20345098,20345933-20345986,
20346300-20346386
Length = 277
Score = 47.2 bits (107), Expect = 2e-05
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Frame = +1
Query: 466 SEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQL-PHTFSLSS------ 624
SEH ++ R +E+H++H N + + + + G F ++L P+ ++
Sbjct: 132 SEHAVDGRRYDMELHMVHLNTQNQTAVVGILYAIG-AQDEFLHKLEPYIIEVADQKDKEK 190
Query: 625 -ILSGLDTER-------FYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNL 780
+ G+D +Y Y GSLTTPPC E V W I +S+ Q+ + + N
Sbjct: 191 IVNGGVDPNVAKEHDIVYYRYMGSLTTPPCTEGVIWTIVRKVHTVSLSQLALLKAAVVNG 250
Query: 781 NLPLVDNFRQLQPLFGRRV 837
N N R LQ + R +
Sbjct: 251 N---EKNARPLQDVNNRNI 266
>08_02_0710 +
20275834-20276352,20276970-20277140,20277692-20277745,
20277848-20277934
Length = 276
Score = 47.2 bits (107), Expect = 2e-05
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Frame = +1
Query: 415 YEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFY 594
Y++ +H+H SEHT++ R +E+H++H N + + + + G F
Sbjct: 120 YQLRQMHWH------TPSEHTIDGRRYDMELHMVHLNAQNQAAVIGILYTIGTRD-EFLQ 172
Query: 595 QL-PHTFSLSS-------ILSGLDTER-------FYTYKGSLTTPPCAEAVTWVIFSDYL 729
+L P+ +S I+ G D +Y Y GS TTPPC E V W +
Sbjct: 173 KLEPYIIEISKQEGKERVIIGGADPNVAKGQDTVYYRYMGSFTTPPCTEGVIWTVVRKVR 232
Query: 730 PISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGRRV 837
+S+ Q+ + + N +N R LQ + R +
Sbjct: 233 TVSLSQITLLKAAVLTGN---ENNARPLQGVNNREI 265
>08_02_0967 -
23110154-23110240,23110620-23110673,23111010-23111177,
23111432-23111534,23111664-23111988,23112091-23112181
Length = 275
Score = 45.2 bits (102), Expect = 8e-05
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 652 FYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGR 831
+Y Y GSLTTPPC + V W I +S +Q+D R + + + +N R LQ + R
Sbjct: 206 YYRYMGSLTTPPCTQGVVWTIVKRVRTVSRYQLDLLREAVHD---EMENNARPLQAVNNR 262
Query: 832 RVFV 843
+ +
Sbjct: 263 DISI 266
>11_01_0330 + 2472195-2472743
Length = 182
Score = 37.9 bits (84), Expect = 0.011
Identities = 26/65 (40%), Positives = 32/65 (49%)
Frame = +1
Query: 643 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPL 822
T ++ Y GSLT PPC E V W + IS Q+ L++ L LP R QPL
Sbjct: 110 TGSYFRYAGSLTAPPCTEDVFWSVLGKIRQISQEQV----ALITAL-LP-AGGARPTQPL 163
Query: 823 FGRRV 837
GR V
Sbjct: 164 NGRTV 168
>08_02_0741 -
20618319-20618523,20618627-20618684,20618807-20619164,
20619253-20619337,20619452-20619726,20619807-20620039,
20620371-20620398
Length = 413
Score = 33.1 bits (72), Expect = 0.33
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +1
Query: 61 TNITMKYFGIIAVFTLVVINVSVAAGWGYRASDQRRWAVLHPACGGRQQSPIAISARQAI 240
T +T+ Y G++ VF N+ V R P+ + SPI+ +A+ +
Sbjct: 187 TQMTIFYDGLVNVFD----NIPVEKAQELMLLASRASIPSPPSAARKSDSPISAAAKLTV 242
Query: 241 PISIPAIELIGYQNPLPGPLT--ITN--TGHSVALTIPK-YTSEEEKKG 372
P ++PA +++ + PL ++N T S A+T+PK ++S + G
Sbjct: 243 PEALPARQIVVQKPEASVPLVSGVSNPITIVSQAVTLPKSFSSSNDSAG 291
>11_01_0329 + 2471015-2471075,2471152-2471432
Length = 113
Score = 31.5 bits (68), Expect = 1.00
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +1
Query: 103 TLVVINVSVAAGWGYRASDQ---RRWAVLHPA---CG-GRQQSPIAISARQAI 240
T V + A +GY A + W L PA CG G++QSPI I +QAI
Sbjct: 29 TAVAADYGYPADYGYAAGSKLGPENWGKLSPAYKLCGDGKKQSPIDIVTKQAI 81
>03_02_0303 - 7261340-7261807
Length = 155
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 827 VAVSSSESHQRTLSSXRPNSTTPNGTGLD 913
V V S ES +R L RPN + NG G D
Sbjct: 24 VFVPSPESFRRVLKLQRPNDSATNGNGAD 52
>04_04_0427 +
25137036-25137119,25137687-25137826,25139775-25139846,
25141160-25141470,25141595-25141705,25143548-25143640,
25144063-25144212,25145062-25145120,25145636-25145693,
25146351-25146622
Length = 449
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 333 DNPQVHFGRGEERLPSTLHLWRS 401
D V +GRG+ R + LH+WRS
Sbjct: 373 DKGVVRYGRGDSRRETCLHVWRS 395
>03_01_0317 +
2492030-2492591,2493189-2493249,2493951-2494066,
2494662-2495176
Length = 417
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +1
Query: 817 PLFGRRVFVRITSKNPKFXKT----KLHYSKWD 903
PL R+ F + +P+F +T LHYSKWD
Sbjct: 280 PLPHRKYFQTVLCNSPEFNRTVVNHDLHYSKWD 312
>02_05_0887 + 32516255-32517292
Length = 345
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Frame = -3
Query: 496 EDAYRSMC------APILCCSCHPSG------NADHRSHTRCLGDLQRCKVDGSLSSPLP 353
EDA S+C A +L CS H G HR H+ CL ++ G+L LP
Sbjct: 48 EDANCSVCMEYPHNAVLLLCSSHDKGCRPYMCGTSHR-HSNCLDQFKKAYTKGALLEELP 106
Query: 352 KCTWGLSM 329
T G ++
Sbjct: 107 ANTVGTNL 114
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 28.7 bits (61), Expect = 7.0
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +1
Query: 295 PLTITN-TGHSVALTIPKYTSEEEKK-GFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGS 468
P+ I+ +G I K E K GF + + P E EIDG+H+H+ +++
Sbjct: 176 PIVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAP--REKEIDGVHYHFTERSK--I 231
Query: 469 EHTLNDMRLPLEMHIIHRNKKYRNTAEAMQ 558
E +++ + LE +H N Y + EA++
Sbjct: 232 EEEISEGKF-LEFAHVHGN-VYGTSVEAVE 259
>07_03_1633 - 28281825-28284005
Length = 726
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 181 HPACGG-RQQSPIAISA--RQAIPISIPAIELIGYQNPLPGPLTITNT 315
HP+ R+ +PIA SA R + P S+PA+ + L G +TN+
Sbjct: 25 HPSLARHRRVNPIAFSAAVRASDPASLPALHAVAVTTGLHGFAAVTNS 72
>07_03_1310 -
25673140-25673418,25673837-25674082,25674189-25674465,
25675474-25675751,25675845-25676378
Length = 537
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 160 QRRWAVLHPACGGRQQSPIAISARQAIPISIPAIELIGYQNPLP-GPLTITNTGHSVALT 336
+R + +H A + P+ +A+ + P ++ A E + P+ G T+ + AL
Sbjct: 35 RRTVSAVHAADPAKSNGPVQAAAKASSPSTVAAPE----KKPVGLGKWTVDSWKAKKALQ 90
Query: 337 IPKYTSEEE 363
+P+Y S+EE
Sbjct: 91 LPEYPSQEE 99
>03_01_0256 - 1992298-1993878
Length = 526
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 217 LWETADGRHKQGAVPPNVS 161
++ TADG K G++PPNVS
Sbjct: 52 VYYTADGASKPGSLPPNVS 70
>01_05_0435 +
22117612-22117756,22118054-22118070,22119154-22119224,
22119314-22119377,22119673-22119720,22119805-22119867,
22119945-22120001,22120090-22120248,22120324-22120392,
22120477-22120568,22121129-22121207,22121756-22121918,
22122524-22122648,22122733-22122995,22123085-22123163,
22123254-22123415,22123551-22123655,22123782-22123876,
22123963-22124059,22124154-22124384
Length = 727
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 528 EIQKHRGSYAAP*WPMCARVLLSAAAYFLLVVNPVWLG 641
E K ++ P W + A +L + L+ NP++LG
Sbjct: 588 EANKRNNNWLPPPWALAAMAILGFNEFMTLLKNPLYLG 625
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,587,466
Number of Sequences: 37544
Number of extensions: 640592
Number of successful extensions: 1576
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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