Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_C20
         (967 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55750 Cluster: PREDICTED: similar to CG11791-PA...   120   4e-26
UniRef50_UPI0000DB736A Cluster: PREDICTED: similar to CG11791-PA...    75   2e-12
UniRef50_Q5TTR8 Cluster: ENSANGP00000026493; n=3; Culicidae|Rep:...    60   8e-08
UniRef50_Q60053 Cluster: Neopullulanase 1 precursor; n=2; Thermo...    36   1.2  
UniRef50_A5WVW8 Cluster: Novel protein similar to H.sapiens PCLO...    35   2.7  
UniRef50_Q4RAI7 Cluster: Chromosome undetermined SCAF23595, whol...    33   8.3  

>UniRef50_UPI0000D55750 Cluster: PREDICTED: similar to CG11791-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG11791-PA, isoform A - Tribolium castaneum
          Length = 137

 Score =  120 bits (290), Expect = 4e-26
 Identities = 69/137 (50%), Positives = 80/137 (58%), Gaps = 14/137 (10%)
 Frame = +3

Query: 357 MVGNNGTMMAIRIVHSKLRKREEHSASVHPAEVXXXXXXXXXXXXX-------------F 497
           MVG+NGTM+AIR+V SKLRKREEHS SVHPA+V                          +
Sbjct: 1   MVGSNGTMIAIRLVRSKLRKREEHSNSVHPADVVLHQTTPAAATQTPTAPQALQPDPLAY 60

Query: 498 RXXXXXXXXXXXXXXXVYPHDQDNLMQPHGNERASF-RSLRKNIGGRWKRLVKKKPEQEV 674
           R               +Y +DQD L+Q    ER  F R  RKN+GGRW+RLVK+KP  EV
Sbjct: 61  RGQFLWQYPPPPPQPYMYNNDQDTLVQNLPTERPGFVRGFRKNLGGRWRRLVKRKPPTEV 120

Query: 675 YTIPPELKPQLKQIYVY 725
           YTIP ELKPQLKQIYVY
Sbjct: 121 YTIPAELKPQLKQIYVY 137


>UniRef50_UPI0000DB736A Cluster: PREDICTED: similar to CG11791-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG11791-PA, isoform A - Apis mellifera
          Length = 160

 Score = 75.4 bits (177), Expect = 2e-12
 Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = +3

Query: 555 HDQDNLMQPHGNERASF-RSLRKNIGGRWKRLVKKKPEQEVYTIPPELKPQLKQIYVY 725
           +DQD L+    ++R  F +  RKNIGGRW+RLVK+KPE E   IPPELK QLK IYVY
Sbjct: 103 NDQDTLVHALPSDRPGFAKGFRKNIGGRWRRLVKRKPESETCAIPPELKDQLKTIYVY 160



 Score = 40.3 bits (90), Expect = 0.072
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = +3

Query: 378 MMAIRIVHSKLRKREEHSASVHP 446
           M+AIR+V SKLRKRE+HS +VHP
Sbjct: 1   MIAIRLVRSKLRKREDHSNAVHP 23


>UniRef50_Q5TTR8 Cluster: ENSANGP00000026493; n=3; Culicidae|Rep:
           ENSANGP00000026493 - Anopheles gambiae str. PEST
          Length = 74

 Score = 60.1 bits (139), Expect = 8e-08
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = +3

Query: 588 NERASFRSLRKNIGGRWKRLVKKKPEQEVYTIPPELKPQLKQIYVY 725
           NE+  F+ L++ + GR+KRLV +K  +    IPPELKPQLK IYVY
Sbjct: 29  NEKTGFKGLKRQLSGRFKRLVSRKAHEPAPVIPPELKPQLKTIYVY 74


>UniRef50_Q60053 Cluster: Neopullulanase 1 precursor; n=2;
           Thermoactinomyces vulgaris|Rep: Neopullulanase 1
           precursor - Thermoactinomyces vulgaris
          Length = 666

 Score = 36.3 bits (80), Expect = 1.2
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = -1

Query: 310 WITGKKFQSDSHNISKTQFNSLTAVSRSNVTMN 212
           WITGK +Q++S +IS TQF+S    +R+N   N
Sbjct: 456 WITGKDYQNNSASISTTQFDSWLRGTRANYPTN 488


>UniRef50_A5WVW8 Cluster: Novel protein similar to H.sapiens PCLO,
           piccolo; n=1; Danio rerio|Rep: Novel protein similar to
           H.sapiens PCLO, piccolo - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 230

 Score = 35.1 bits (77), Expect = 2.7
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +3

Query: 660 PEQEVYTIPPELKPQLKQIYVY*TL*KRIVFSMLVLKQETSKALVLSVDVNQNSMVVTN- 836
           P  +    P   K  +KQ+    T+ + ++ ++   K ET    +  VD+N  S V  N 
Sbjct: 131 PTGDTSKAPIPDKTDVKQVQQATTVPEPVIGAVTAPKAETKTCPLCKVDLNIGSKVTPNY 190

Query: 837 SYQHECKEI*CNIC 878
           +   ECK+I CN+C
Sbjct: 191 NTCTECKKIVCNLC 204


>UniRef50_Q4RAI7 Cluster: Chromosome undetermined SCAF23595, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF23595,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 455

 Score = 33.5 bits (73), Expect = 8.3
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -1

Query: 499 RNARGSGCGAGAAWSTSAGCTEAECSSLLRSLLWTMRIAIIVPLFPTI--VSKGP 341
           R   G+G G  AA   + GC + + S   R   W   +A+ VP+ PT+  + +GP
Sbjct: 392 REGGGAGGGGAAAHGEAPGCDQVQRSYWSRH-FWVDLLAVAVPMVPTVAWLCRGP 445


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,468,944
Number of Sequences: 1657284
Number of extensions: 14537827
Number of successful extensions: 37874
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37844
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89815291940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)