Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_C12
(733 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 233 2e-60
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 167 3e-40
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 154 2e-36
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 149 7e-35
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 146 5e-34
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 140 3e-32
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 136 5e-31
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 130 3e-29
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 121 2e-26
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 121 2e-26
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 109 9e-23
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 99 1e-19
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 96 9e-19
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 95 2e-18
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 83 9e-15
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 63 6e-09
UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1; Staphy... 46 0.001
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 45 0.002
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 43 0.009
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 42 0.021
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 42 0.021
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 41 0.036
UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1; Sulfol... 40 0.048
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 40 0.048
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.063
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 40 0.083
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.15
UniRef50_A0LE03 Cluster: Serine/threonine protein kinase; n=1; M... 38 0.33
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 37 0.44
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 37 0.59
UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;... 35 1.8
UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|... 34 3.1
UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3; Bacill... 34 4.1
UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma pro... 34 4.1
UniRef50_Q01GC3 Cluster: Predicted E3 ubiquitin ligase; n=1; Ost... 34 4.1
UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n... 33 7.2
UniRef50_A3SK38 Cluster: Putative ABC transport system, permease... 33 9.5
UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putati... 33 9.5
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 233 bits (571), Expect = 2e-60
Identities = 120/196 (61%), Positives = 143/196 (72%), Gaps = 1/196 (0%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
+ WQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRG 75
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVL 445
F+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K
Sbjct: 76 FSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPK 135
Query: 446 KGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIR 625
KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L GIR
Sbjct: 136 KGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIR 195
Query: 626 AKRLKDAAENPDDVTK 673
AKR K+AAE DV K
Sbjct: 196 AKRAKEAAE--QDVEK 209
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 167 bits (405), Expect = 3e-40
Identities = 84/187 (44%), Positives = 118/187 (63%), Gaps = 1/187 (0%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
+HWQ +VKTWFNQPAR+ RR+ R LRP+V T++Y+ KVRAG+G
Sbjct: 14 KHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKG 73
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVL 445
FTL E++ AG+ A TIGI+VD RR+N+S+E LQ NVQR+K Y+A+L++FP + ++V
Sbjct: 74 FTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVK 133
Query: 446 KGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIR 625
G++ EE ATQ++G MP+ +T D K FKAY +R R+ A+ G R
Sbjct: 134 AGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAGAR 193
Query: 626 AKRLKDA 646
AKR +A
Sbjct: 194 AKRAAEA 200
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 154 bits (374), Expect = 2e-36
Identities = 81/189 (42%), Positives = 113/189 (59%), Gaps = 1/189 (0%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
+ WQR VK WF+QP + RR+ R LRP VRCPT+RY+TK+R+GRG
Sbjct: 16 KDWQRRVKVWFDQPGAKKRRRTAR-EAKAAKLGLRPVQLLRPAVRCPTLRYNTKIRSGRG 74
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLK 448
FT+ E++AAGL +AR++GI VD RRRNKS ESL++NV+RIK Y+ARL++ PK K K
Sbjct: 75 FTIEEVKAAGLGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQARLVVIPKLTKKNK 134
Query: 449 GEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVG-IR 625
+ + A + ++P+ R IT +EK F AY+ LR AR + G ++
Sbjct: 135 DKKVDLSNVEAVRQVQSVLPLPAGTEAEKPRAITSEEKEFNAYETLRKARGTHRAAGKVK 194
Query: 626 AKRLKDAAE 652
A+ K E
Sbjct: 195 ARIAKKEEE 203
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 149 bits (361), Expect = 7e-35
Identities = 82/188 (43%), Positives = 117/188 (62%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
+HWQ V+ F+Q ++ R+Q+R+ LRP+VR PTV+Y+ KVRAGRG
Sbjct: 16 KHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKVRAGRG 74
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLK 448
FTL E++A G+ P +ARTIGI+VD RR+NKS E+ NV R++EY+++L++F K K +
Sbjct: 75 FTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASE 134
Query: 449 GEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRA 628
+ E+ AT PV+QPAP+S R + E+ AY+ LR AR+ K GIR
Sbjct: 135 VASFEQVDVSAT------FPVEQPAPESGLRAVEVPEQT--AYRTLRLARNEKKYKGIRE 186
Query: 629 KRLKDAAE 652
KR K+ AE
Sbjct: 187 KRAKEKAE 194
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 146 bits (354), Expect = 5e-34
Identities = 86/191 (45%), Positives = 116/191 (60%), Gaps = 8/191 (4%)
Frame = +2
Query: 107 VKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 286
VK +FNQPA++ RR++ R+ LRP V CPTVRY+ K R GRGF+L E+
Sbjct: 38 VKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-LRPQVNCPTVRYNMKRRLGRGFSLEEL 96
Query: 287 RAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANE 463
+AAG+ P +ARTIGI VD RR+NKS E + INVQR+K Y ++L+LFP KK KG+A E
Sbjct: 97 KAAGVKPRYARTIGIRVDRRRKNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATE 156
Query: 464 EERKLATQLR-----GPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRA 628
EE K ATQ R + + PA + R +TE+E K Y++L+ S + R
Sbjct: 157 EEVKAATQDRSRYGTAAVGGLVTPA-REAPRKVTEEESTKKMYKFLKKNHSAVRFFRARN 215
Query: 629 KRL--KDAAEN 655
+R K+A EN
Sbjct: 216 RRAARKEAKEN 226
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 140 bits (339), Expect = 3e-32
Identities = 79/183 (43%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
+ WQ+ VK WFNQP ++ RRK R LRP+V CP+ RY +KVRAGRG
Sbjct: 15 KKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHCPSERYKSKVRAGRG 73
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK-KVL 445
FT +E++ AG++ +AR+ G+AVDPRRRN+ ES+ N+QR+ EY++RLI P K KVL
Sbjct: 74 FTFQELKQAGMSDKYARSFGVAVDPRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVL 133
Query: 446 KGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIR 625
K + + L V+ K A + E+EK F+A+ LR AR K GIR
Sbjct: 134 KIDDGKN-----------LNVVKVVPGKVKALKVGEEEKKFEAFVTLRRARCDEKFAGIR 182
Query: 626 AKR 634
KR
Sbjct: 183 MKR 185
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 136 bits (329), Expect = 5e-31
Identities = 85/212 (40%), Positives = 113/212 (53%), Gaps = 17/212 (8%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
+ WQR V+ F+QP R++RR++ R+ LRP+VRCPTV+Y+ +VR GRG
Sbjct: 33 KDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVGRG 91
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK---K 439
FTL E++ AG+ ART+GIAVD RR N S ESL NV R+K+Y+ARLILFP+ K
Sbjct: 92 FTLAELKEAGIPKKLARTVGIAVDHRRVNYSKESLVANVARLKDYKARLILFPRKSGQFK 151
Query: 440 VLKGEANEEERKLA-----------TQLRGPLMPVQQPAPKSVARPITEDE---KNFKAY 577
L A+E A T G + P++ + + DE AY
Sbjct: 152 KLDSSADEVNAAKAAFAAEGKTEGYTTKLGAIFPIKNISAAEAVTEVKRDELPKGEEAAY 211
Query: 578 QYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 673
+ LR RS A+ GIR KR K AE K
Sbjct: 212 RRLRETRSEARYKGIREKRAKAKAEEESAAKK 243
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 130 bits (314), Expect = 3e-29
Identities = 79/194 (40%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
+HW RFVKT++NQPA + RR+Q R LRP+VR T++Y++ + GRG
Sbjct: 14 KHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQTIKYNSVQKLGRG 72
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK--GKK- 439
F+L E++ AGLN FART+GI+VD RRRN + E L NV+R+K Y ++L+L+P+ GK
Sbjct: 73 FSLIELKEAGLNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPK 132
Query: 440 --VLKGEANEEERKLATQLRGPLMPVQQPAPK-SVARPITEDEKNFKAYQYLRGARSIAK 610
V+K NE Q P + Q PK A I+++ + Y+ LR AK
Sbjct: 133 NGVVKDSTNEVVAHPVAQNTNPEVLTFQRTPKREKATVISKELRAKNVYRRLRQEWYNAK 192
Query: 611 LVGIRAKRLKDAAE 652
VG++ KR K A E
Sbjct: 193 FVGVKEKR-KQAKE 205
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 121 bits (292), Expect = 2e-26
Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
++++R++KTW+NQP R+ R+ R LRPIV PT RY+ K R GRG
Sbjct: 14 KNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQRYNMKTRLGRG 72
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVL 445
FTL E+ A G+N A +IGIAVD RR + S E+ QINV R+K+Y ++L P KGKK
Sbjct: 73 FTLEELSACGINKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIVLQPRKGKKTK 132
Query: 446 KG-------EANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSI 604
KG A EE + L P++ IT +E+ F+A+ LR
Sbjct: 133 KGFAGIPNDSAREEFKALKNVSHEKAFPIKAQTLAVKTHVITPEERKFRAFSTLRKQFIE 192
Query: 605 AKLVGIRAKRLKDAA 649
AK G +A + K +A
Sbjct: 193 AKNFGKKATKAKASA 207
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 121 bits (291), Expect = 2e-26
Identities = 74/179 (41%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Frame = +2
Query: 101 RFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLR 280
RFVK NQ ++ RR+ R LRP+V P+ RY+ K+R GRGFTL+
Sbjct: 19 RFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHMPSRRYNYKLRFGRGFTLQ 77
Query: 281 EIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA- 457
E++ AGL AR++G+AVD RR NK ESL +NV R+K Y ++L+LFP+ K KG A
Sbjct: 78 ELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAG 137
Query: 458 ------NEEERKLA--TQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAK 610
E+ R LA Q +MPV Q K R +TE + + Y LR AR AK
Sbjct: 138 LPSDTPREKLRTLALTKQSVKKVMPVVQEFVKEPPREVTEKDTSVNVYHKLRVARKAAK 196
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 109 bits (261), Expect = 9e-23
Identities = 55/118 (46%), Positives = 72/118 (61%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
++W VKT+F+ PAR RR+ R LRPIVRCPTVRY+ K R GRG
Sbjct: 36 KYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIVRCPTVRYNMKTRLGRG 95
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKV 442
FT +E+ AAG +P AR GIAVD RR + ++ NV+R++ Y+ARLI KG+ V
Sbjct: 96 FTPKELVAAGFDPALARFQGIAVDARRAHSKDAMVKQNVERLQAYKARLIKVKKGETV 153
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 98.7 bits (235), Expect = 1e-19
Identities = 51/119 (42%), Positives = 68/119 (57%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 268
+ W+ V TW QP R+ RR Q R+ L+P V C R++ K+R GRG
Sbjct: 14 KDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLGRG 72
Query: 269 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVL 445
F+L+E+RAA ++ ARTIGIAVDPRR+ S E L N QR+ EY RL L K++
Sbjct: 73 FSLKELRAAKIDKNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLCLKSVSVKIV 131
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 95.9 bits (228), Expect = 9e-19
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 10/200 (5%)
Frame = +2
Query: 95 WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 274
WQR+V+ FN+ +R +R+ R L P+V CPT RY+ K R G+GFT
Sbjct: 17 WQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQRYNYKTRLGKGFT 75
Query: 275 LREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP----KGKKV 442
L EI+A L P AR+IGI VD RR+N+ ESL+ N +R+++Y L++ P K K
Sbjct: 76 LEEIKAVKLTPSAARSIGIIVDKRRKNRCEESLKENAERLQKYLNSLVMIPLKKDKPKNG 135
Query: 443 LKG---EANE---EERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSI 604
+ G +A + E+ K QLR P ++ +++ AY+ LR A+ +
Sbjct: 136 IGGIPADATKEVIEQHKERKQLRSIFKKGSSVKPFYETIETSKIDQSSSAYKTLRKAK-L 194
Query: 605 AKLVGIRAKRLKDAAENPDD 664
A+ R ++ KD D
Sbjct: 195 AERRKNRQQQRKDIKRKSKD 214
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/90 (48%), Positives = 63/90 (70%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 385
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+VDP+++ K E +
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPKKKKKKKERKKEKN 72
Query: 386 QRIKEYRARLILFPKGKKVLKGEANEEERK 475
+R+ E + I++PK +K + + +E +K
Sbjct: 73 ERVTETNQKDIIYPKREKEREKKGMKEGKK 102
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 82.6 bits (195), Expect = 9e-15
Identities = 47/107 (43%), Positives = 63/107 (58%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 385
LRPIVRCPT++Y+ R GRGFT E AGL+ AR +GIAVD RRR+ + E+ NV
Sbjct: 51 LRPIVRCPTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLRRRDTNQEAFDKNV 110
Query: 386 QRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 526
+RIK Y ++ ++ K EA E K T+ +MP +P P
Sbjct: 111 ERIKTYLGKITIYESVK-----EARESGAKPYTK---EIMPFVKPKP 149
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRY-RRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGR 265
+ W+ V T FNQP + RRK + L+P+V+CPT ++TK++ GR
Sbjct: 14 KKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKIKLGR 73
Query: 266 GFTLREIRAAGLNPVFARTIGIAVDPRRRNKSV 364
GF+++EI+ + + A + GI++D RR+ ++
Sbjct: 74 GFSIQEIKKSMIKLKTATSYGISIDKRRKKSNI 106
>UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein
L13e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 86
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = +2
Query: 212 PIVRCPTVRYH----TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQI 379
PIVR P +R H +R GRGF+ +E+ A GL+ A+ +G+ +D RRR +
Sbjct: 10 PIVRKPMLRKHGGLSPGLRVGRGFSKKELEAVGLDLKTAKKLGLRIDKRRRTIH----EW 65
Query: 380 NVQRIKEYRARL 415
NVQ +++Y ++
Sbjct: 66 NVQALRDYLTKI 77
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = +2
Query: 251 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNK---SVESLQINVQRIKE 400
VR GRGF+L E+ AGL+ AR +G+ VD RRR +VE+L+ ++R++E
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLRE 75
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/56 (44%), Positives = 28/56 (50%)
Frame = -2
Query: 351 RLRGSTAIPIVRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 184
++R S VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 388 KIRVSLTTLAVRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 41.5 bits (93), Expect = 0.021
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +2
Query: 209 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 376
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI VD RR ++++
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDERRETSWPQNIE 64
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 41.5 bits (93), Expect = 0.021
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +2
Query: 248 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 418
K++ GRGF++ EI+A L AR +GI VD RR++ + + NV+ ++EY ++++
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKS----TWEWNVKALQEYVSKVV 69
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 40.7 bits (91), Expect = 0.036
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRRK 151
+ WQR+VKTWFNQP R+ RR+
Sbjct: 19 KDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1;
Sulfolobus tokodaii|Rep: 50S ribosomal protein L13e -
Sulfolobus tokodaii
Length = 77
Score = 40.3 bits (90), Expect = 0.048
Identities = 18/68 (26%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTK---VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 376
+ PIV+ P R+ + + G+GF+L+E++ +G + A+ + + +D RR+ E+++
Sbjct: 2 VEPIVKRPHYRFEIRKKDTKIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPENVE 61
Query: 377 INVQRIKE 400
+ ++++KE
Sbjct: 62 V-LKKLKE 68
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 40.3 bits (90), Expect = 0.048
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +2
Query: 254 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARL 415
R GRGF++ E+ AGLN AR +GI VD RR KSV + NV+ +K++ +L
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIRR--KSVH--EENVETLKKFSEQL 74
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.063
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 301
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 39.5 bits (88), Expect = 0.083
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +2
Query: 251 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRN---KSVESLQINVQRIKEY 403
++ GRGF+ E++A GL AR +GI VD RR+ ++VE+L+ ++ +KE+
Sbjct: 30 LKVGRGFSEGEVKALGLTVKEARLLGIYVDERRKTVHPENVEALRSWLKALKEH 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 212 PIVRCPTVRYHTKVRAGRGFTLREIR 289
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_A0LE03 Cluster: Serine/threonine protein kinase; n=1;
Magnetococcus sp. MC-1|Rep: Serine/threonine protein
kinase - Magnetococcus sp. (strain MC-1)
Length = 1143
Score = 37.5 bits (83), Expect = 0.33
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +2
Query: 338 DPRRRNKSVESLQINVQRIKEYRAR---LILFPKGKKVLKGEANEEERKLATQLRGPLM- 505
D +R N+ + LQ N +R + + R ++L P+ +++ A ER L+
Sbjct: 733 DEKRVNRLEQRLQANKERYRTTQLRGDEMLLKPEAGEIIPNSAPPRERDEPFMASQNLIT 792
Query: 506 PVQQPAPKSVARPITEDEKNFKA 574
P PAP+S A + EDEKNF A
Sbjct: 793 PAAPPAPRS-ASFLEEDEKNFTA 814
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 37.1 bits (82), Expect = 0.44
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 89 RHWQRFVKTWFNQPARRYRR 148
+ WQR V TWFNQPAR+ RR
Sbjct: 16 KDWQRRVATWFNQPARKIRR 35
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 36.7 bits (81), Expect = 0.59
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +2
Query: 425 PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLR 589
PKGKK K A EEE +A Q+ P+ PV K V ++E++K YQ L+
Sbjct: 297 PKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPSSRYQILQ 349
>UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L13E - Ignicoccus hospitalis KIN4/I
Length = 96
Score = 35.1 bits (77), Expect = 1.8
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 385
L P++R + K+R GRGF+ E+ A GL+ A +GI +D RR K+V + NV
Sbjct: 29 LTPVLRKDAGK-KPKMRRGRGFSKGELEAVGLDFKKALKMGIPIDKRR--KTVH--EWNV 83
Query: 386 QRIKEY 403
+ +K++
Sbjct: 84 EALKKW 89
>UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3;
Sophophora|Rep: CG17608-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 271
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 335 VDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 505
+D R+ S+ SLQ + I+E +L+LFP+G + K + +A Q + P+
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200
Query: 506 PV 511
PV
Sbjct: 201 PV 202
>UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3;
Bacillus|Rep: Polyketide synthase type I - Bacillus
amyloliquefaciens
Length = 1917
Score = 33.9 bits (74), Expect = 4.1
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 380 NVQRIKEYRARLILF-----PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARP 544
N +R+KEY ARL++F P+G L + + + +L LRG L V A SV
Sbjct: 895 NPERLKEYAARLLMFLKDEAPEGSGPLYDKIDTMQNQLEDALRGVLAEVLHVASGSV--- 951
Query: 545 ITEDEKNFKAY 577
+DE+++K +
Sbjct: 952 --DDEQDWKEF 960
>UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Beta-glucosidase - marine
gamma proteobacterium HTCC2080
Length = 824
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 251 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 418
V A G T RE++A G++ +FA T+ +A D R ++ ES + Q + Y ++
Sbjct: 153 VAAISGATAREVKATGIDWIFAPTVAVAQD-YRWGRTYESYSSDPQVVSSYAGGMV 207
>UniRef50_Q01GC3 Cluster: Predicted E3 ubiquitin ligase; n=1;
Ostreococcus tauri|Rep: Predicted E3 ubiquitin ligase -
Ostreococcus tauri
Length = 355
Score = 33.9 bits (74), Expect = 4.1
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +2
Query: 230 TVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRA 409
T R + + GR L I A +N AR +G R R + +N R E
Sbjct: 247 TTRVNAIIEYGRVPDLAAI-AREVNREEARKVGAGAKARIRAITATPSSLNSSRRFEIEV 305
Query: 410 RLILFPKGKKVLKGEANEEERKLATQL-RGPLMPVQQPAPKSVARPITEDEK 562
R + P G+ + +EEE + L ++P+ Q AP+ V P +DE+
Sbjct: 306 RRVRPPAGRTMDNHHDDEEEAEEERSLSEDEILPLSQAAPRYV--PTDDDEE 355
>UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n=1;
Streptomyces exfoliatus|Rep: Poly(3-hydroxybutyrate)
depolymerase - Streptomyces exfoliatus (Streptomyces
hydrogenans)
Length = 488
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 391 SLNIDLQ*FNRLVASTGIYSNSNRSGKYWVQSCGPNFTKSESS 263
++N DL + R + +Y NS+ SG WV GPN S +S
Sbjct: 143 AVNDDLATYYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTS 185
>UniRef50_A3SK38 Cluster: Putative ABC transport system, permease
protein; n=1; Roseovarius nubinhibens ISM|Rep: Putative
ABC transport system, permease protein - Roseovarius
nubinhibens ISM
Length = 287
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 723 FFLFIHFLGFTSLAVGAFVTSSGFSAASFNLLARIPTSLAMERAPL 586
F L L F + A+G ++T F+A +FN+ +P LA A L
Sbjct: 23 FSLLFGILKFPNFAIGGYITVGAFAAYTFNVPLGLPLPLAAAAAML 68
>UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putative;
n=6; Plasmodium|Rep: Nucleolar GTP-binding protein 1,
putative - Plasmodium chabaudi
Length = 682
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 338 DPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEAN 460
DP R+ + +S +QR K Y+ ++ + + KK KGEA+
Sbjct: 618 DPTRKMRIYQSTSTEIQRKKAYKLNIVAYRQIKKGTKGEAD 658
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,640,633
Number of Sequences: 1657284
Number of extensions: 13909050
Number of successful extensions: 37548
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 36249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37519
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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