Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_C09
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.      27   0.51 
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     27   0.51 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   2.0  

>Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.
          Length = 153

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -1

Query: 500 PKSGLFDCKIGLDSATKKADANQSLTPPRTLSQLVCGEYRAIRFSNK*DTTRS 342
           P+    DC+  LDSA + A+A++         ++   ++ A R+  + DT R+
Sbjct: 74  PEPYFSDCQQRLDSAKRDAEADRRAFTAEMQKKIQVNQWEADRYVQESDTIRN 126


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -1

Query: 500 PKSGLFDCKIGLDSATKKADANQSLTPPRTLSQLVCGEYRAIRFSNK*DTTRS 342
           P+    DC+  LDSA + A+A++         ++   ++ A R+  + DT R+
Sbjct: 74  PEPYFSDCQQRLDSAKRDAEADRRAFTAEMQKKIQVNQWEADRYVQESDTIRN 126


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 19/98 (19%), Positives = 38/98 (38%)
 Frame = +1

Query: 244  VALEAEILACEMIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGG 423
            +A  +    C  I+        P  +I  R  ++ +   LLE +++L +P  +W  +   
Sbjct: 887  IAAVSSTYPCLRIVIQQLGYQPPSATITTRWIRQTMTEVLLEPKVSLENPSVNWRLLWRN 946

Query: 424  VNDWLASAFFVAESKPILQSNNPDFGAGRLLHLSSGIP 537
            ++    S     +   +    N     G LLH  + +P
Sbjct: 947  IH---RSCLSSLQRSTLFLLVNGKISHGELLHRMNRVP 981


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,095
Number of Sequences: 2352
Number of extensions: 14870
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)