BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_B24
(874 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D5784D Cluster: PREDICTED: similar to CG7194-PA,... 77 8e-13
UniRef50_UPI0000D55BE6 Cluster: PREDICTED: similar to CG30424-PA... 71 4e-11
UniRef50_UPI00015B57E3 Cluster: PREDICTED: similar to GA15837-PA... 50 6e-05
UniRef50_Q8MMC3 Cluster: CG30424-PA; n=3; Sophophora|Rep: CG3042... 41 0.036
UniRef50_A7RP16 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.083
UniRef50_UPI00015B57E2 Cluster: PREDICTED: similar to GA15837-PA... 39 0.14
UniRef50_Q9VSH0 Cluster: CG7194-PA; n=2; Sophophora|Rep: CG7194-... 38 0.44
UniRef50_Q8N884 Cluster: Uncharacterized protein C6orf150; n=23;... 38 0.44
UniRef50_UPI0000D5657E Cluster: PREDICTED: similar to CG30424-PA... 37 0.77
UniRef50_A7S0T1 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.77
UniRef50_UPI00015B46B5 Cluster: PREDICTED: similar to CG33531-PA... 36 1.8
UniRef50_O66878 Cluster: Chromosome assembly protein homolog; n=... 35 3.1
UniRef50_A1ZA55 Cluster: CG12970-PB, isoform B; n=1; Drosophila ... 34 4.1
UniRef50_Q2B8U3 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_A2RAG3 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_Q1Q1C1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_A2DC21 Cluster: Dynein heavy chain family protein; n=1;... 33 9.5
UniRef50_A1ZA54 Cluster: CG12970-PA, isoform A; n=2; Sophophora|... 33 9.5
UniRef50_A0BPA6 Cluster: Chromosome undetermined scaffold_12, wh... 33 9.5
UniRef50_A6S1M2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_P59727 Cluster: PKHD-type hydroxylase NE2125; n=33; Pro... 33 9.5
>UniRef50_UPI0000D5784D Cluster: PREDICTED: similar to CG7194-PA,
partial; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG7194-PA, partial - Tribolium castaneum
Length = 174
Score = 76.6 bits (180), Expect = 8e-13
Identities = 48/171 (28%), Positives = 88/171 (51%)
Frame = +3
Query: 324 KITNLESLLADISVRYIQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAG 503
K LE+ L +++ ++I L++ + + + ++L++I + KMKE DP + + S V + G
Sbjct: 6 KYLYLENTLNEMNSKFISLQDKEVKRNNQILESILKTFIDKMKEKDPLFKKMFSRVFYGG 65
Query: 504 SHYDNVRINKPDEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHAGYVQLKMGPQFQNLP 683
S+YD +R+ KP+EFD+ + + +P E I + G+VQLK+G +
Sbjct: 66 SYYDGLRVGKPEEFDLDLLLSLP--------KYAEPTIMVS-KVPGFVQLKLG-NYDGF- 114
Query: 684 MRDGVDWQINKTAYLWKDESNFLLSTKFLDWFKSVVXRALNKFDTENGQSV 836
MR +T D+ FL + K L W + +V + +N F + + V
Sbjct: 115 MRQPEAAPTYRTFGNLFDKEYFLDTDKVLSWMEGIVQKTMNDFPQKGSKRV 165
>UniRef50_UPI0000D55BE6 Cluster: PREDICTED: similar to CG30424-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG30424-PA - Tribolium castaneum
Length = 398
Score = 70.9 bits (166), Expect = 4e-11
Identities = 45/157 (28%), Positives = 85/157 (54%)
Frame = +3
Query: 336 LESLLADISVRYIQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYD 515
+E++L DI+ R+I L E D + ++L+++ + ++MK DP + V + GS YD
Sbjct: 1 MENILNDINKRFISLPEEDVRGNKQILESVLRTFVEQMKTQDPLFKALFRRVFYGGSFYD 60
Query: 516 NVRINKPDEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHAGYVQLKMGPQFQNLPMRDG 695
+++ KP+EFD+ I + +P+ N ES++ G+V LK+ L +G
Sbjct: 61 GLKVGKPEEFDLDILLHIPIYAQPVLN---ESNV------PGFVWLKLNNLDGWLRQPEG 111
Query: 696 VDWQINKTAYLWKDESNFLLSTKFLDWFKSVVXRALN 806
++ + +L +++FL + K L W +S+V + LN
Sbjct: 112 RVYKDFRKKFL--ADNDFLDTGKTLRWMESLVQKTLN 146
>UniRef50_UPI00015B57E3 Cluster: PREDICTED: similar to GA15837-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA15837-PA - Nasonia vitripennis
Length = 396
Score = 50.4 bits (115), Expect = 6e-05
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Frame = +3
Query: 357 ISVRYIQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVRINKP 536
+S ++ L E D ++ + L + Q + + MK+ D +N + + GS+Y + + P
Sbjct: 22 VSSEFLTLVEKDRKVSDEHLHAVVQRIVELMKQ-DDLFNLMFRKIMYGGSYYKDTKYGTP 80
Query: 537 DEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHA--GYVQLKMGPQFQNLPMRDGVDWQI 710
+EFD+ I +P+ + DIK + H G+V++K+ + ++
Sbjct: 81 EEFDLNFIIDLPIDY---------GDIKIDTNHENYGFVKIKLNSRAVLDTQWKKYSEEL 131
Query: 711 NKTAYLWKDESNFLLSTKFLDWFKSVVXRALNKFDTENGQSVYNV 845
+K L +D N++ KF +W +SV + L++++ + ++ V
Sbjct: 132 DK--LLTRD--NYVDQKKFRNWIESVFKKTLSRYEIAHNGYIFFV 172
>UniRef50_Q8MMC3 Cluster: CG30424-PA; n=3; Sophophora|Rep:
CG30424-PA - Drosophila melanogaster (Fruit fly)
Length = 459
Score = 41.1 bits (92), Expect = 0.036
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Frame = +3
Query: 336 LESLLADISVRYIQLKESDXEL---HYKVLDT-IFQNLHKKMKEIDPYYNRYSSTVHHAG 503
+E L + +Y+ + + + + HY+ L + IF+ L K+ E+D +S G
Sbjct: 11 VEKKLYECKKKYVDIPKDEGQRYGKHYEALTSKIFEILRKENPELDIIIAEFSLE----G 66
Query: 504 SHYDNVRINKPDEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHAGYVQLKMGPQFQNLP 683
S D ++I KP+EFD+V ++ P +++ + +P+ G V L M + L
Sbjct: 67 SVGDMLKIAKPNEFDLVFKLKFP--YYKSI------AVTRDPKIPGNVLLDMTRVLELLK 118
Query: 684 MRDGVDWQINKTAYLWK--DESNFLLSTKFLDWFKSVVXRALNK 809
D+Q + + D NF + + W +S+ +ALN+
Sbjct: 119 DDPREDFQRIRELIQGRLVDAQNFFVVDRLRSWLQSLFSQALNR 162
>UniRef50_A7RP16 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 421
Score = 39.9 bits (89), Expect = 0.083
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +3
Query: 300 SDKVPYNPKI-TNLESLLADISVRY-IQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYN 473
+DKV N + ++L L ++ ++ + L++ + K ++ I KK+ D
Sbjct: 22 TDKVLKNARCRSHLNHYLDELDRKFSVDLRDQEVINIRKDMEYIASQFAKKVACHDA--- 78
Query: 474 RYSSTVHHAGSHYDNVRINKPDEFDMVIEI 563
R+ + ++GSHY+ ++++ PDEFD +IEI
Sbjct: 79 RFKGEILNSGSHYEGLQVSAPDEFDYMIEI 108
>UniRef50_UPI00015B57E2 Cluster: PREDICTED: similar to GA15837-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA15837-PA - Nasonia vitripennis
Length = 418
Score = 39.1 bits (87), Expect = 0.14
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Frame = +3
Query: 339 ESLLADISVRYIQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDN 518
+S+ I+ Y+ L ++ + + + L I + + + + D +N + GS+Y
Sbjct: 18 DSVFQIINSNYLTLDDNHRKSNNEHLKLIVEEVFIPLMKEDELFNLLYKRIMWGGSYYKG 77
Query: 519 VRINKPDEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHAGYVQLKMGPQFQNLPMRDGV 698
+ P+EFD+ + +P+ + I+ + GYV+L++ + PM
Sbjct: 78 TKYGVPNEFDLDFVLKLPIDYR-------NIQIRTNHDNYGYVKLEVD---RTEPMSS-- 125
Query: 699 DWQINKTAY-LWKDESNFLLSTKFLDWFKSVVXRALNK 809
+WQ +K W ++L +F W +SV A +
Sbjct: 126 NWQKHKKILDKWITSDDYLDRDRFNRWMQSVFEGAFRR 163
>UniRef50_Q9VSH0 Cluster: CG7194-PA; n=2; Sophophora|Rep: CG7194-PA
- Drosophila melanogaster (Fruit fly)
Length = 346
Score = 37.5 bits (83), Expect = 0.44
Identities = 15/67 (22%), Positives = 37/67 (55%)
Frame = +3
Query: 372 IQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVRINKPDEFDM 551
+ + +++ ++ K + I + ++K +D + + + GS+ D V++N PDEFD+
Sbjct: 14 LSISDNERAVYTKEAEEIQNYVVDELKRVDKTFRQVFDGLSLGGSYLDRVKLNLPDEFDL 73
Query: 552 VIEIGVP 572
+++ P
Sbjct: 74 HMKLKFP 80
>UniRef50_Q8N884 Cluster: Uncharacterized protein C6orf150; n=23;
Amniota|Rep: Uncharacterized protein C6orf150 - Homo
sapiens (Human)
Length = 522
Score = 37.5 bits (83), Expect = 0.44
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +3
Query: 495 HAGSHYDNVRINKPDEFDMVIEIGVP-LCFHEKTNNRXESDIKFE 626
+ GS+Y++V+I+ P+EFD++ ++ VP + E +N R +KF+
Sbjct: 210 NTGSYYEHVKISAPNEFDVMFKLEVPRIQLEEYSNTRAYYFVKFK 254
>UniRef50_UPI0000D5657E Cluster: PREDICTED: similar to CG30424-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG30424-PA - Tribolium castaneum
Length = 379
Score = 36.7 bits (81), Expect = 0.77
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 366 RYIQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVRINKPDEF 545
R I ++ D L K ++ I + MK+ +++ + GS YD ++I K DEF
Sbjct: 26 RLISCEKRDVVLTKKRVEKIIYRVVNAMKKESSTFSKLYWKIFGVGSIYDEIKIGKADEF 85
Query: 546 DMVIEIGVP----LCFHEKT 593
D+ + + +P L EKT
Sbjct: 86 DIDLLLRLPPNLELSLEEKT 105
>UniRef50_A7S0T1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 334
Score = 36.7 bits (81), Expect = 0.77
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 429 QNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVRINKPDEFDMVIEI 563
Q + K ++E D YY + GS+Y+ ++ PDEFD++IEI
Sbjct: 36 QKILKFVEERDTYYK--FDRLLMTGSYYERAKVKNPDEFDLMIEI 78
>UniRef50_UPI00015B46B5 Cluster: PREDICTED: similar to CG33531-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG33531-PA - Nasonia vitripennis
Length = 1140
Score = 35.5 bits (78), Expect = 1.8
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 513 DNVRINKPDEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHAGYVQLKMGPQFQNLPMRD 692
D+ + KPDE+D+ + + +PL N +K + GYV++K+ + +
Sbjct: 934 DSTHVGKPDEYDLDLRMRLPL-------NYPTLKVKQNHENYGYVKVKVEDDSKVIVRLP 986
Query: 693 GVDWQI-NKTAYLWKDESNFLLSTKFLDWFKSVVXRALNK 809
W+ +K W D +L KF W + V+ + ++
Sbjct: 987 --KWKTHSKILNEWLDNKGYLDKNKFRQWMEKVMSKTYDR 1024
>UniRef50_O66878 Cluster: Chromosome assembly protein homolog; n=1;
Aquifex aeolicus|Rep: Chromosome assembly protein homolog
- Aquifex aeolicus
Length = 1156
Score = 34.7 bits (76), Expect = 3.1
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 276 ESKCKEGISDKVPYNPKITNLESLLADISVRYIQLKES--DXELHYKVLDTIFQNLHKKM 449
E K + I K +I NL+S L + ++ +LKE + E + KVL+ +NL++++
Sbjct: 861 EVKVYDYIKQKEELEKEILNLKSKLGKLKIKEEELKEKIFEKEKNLKVLEEKIENLNEEL 920
Query: 450 KEID 461
KE +
Sbjct: 921 KEYE 924
>UniRef50_A1ZA55 Cluster: CG12970-PB, isoform B; n=1; Drosophila
melanogaster|Rep: CG12970-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 394
Score = 34.3 bits (75), Expect = 4.1
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Frame = +3
Query: 333 NLESLLADISVRYIQLKE--SDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGS 506
NLE+++ + +Y+++KE HY L + K + ST+ G
Sbjct: 4 NLENIVNQATAQYVKIKEHREPYTAHYNALKDKVYSEWKSSAVLGKLLK--GSTL--CGG 59
Query: 507 HYDNVRINKPDEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHAGYVQLK----MGPQFQ 674
+ D ++++ PDEFD++I L F E ++D +P + K +G Q
Sbjct: 60 YGDKLKVSIPDEFDLLIH----LVFPENDKIIVKADAS-KPGNVILDMTKVMEIIGSQEH 114
Query: 675 NLPMRDGVDWQINKTAYLWKDESNFLLST 761
N P+ D + +N L +D+ N L +
Sbjct: 115 NKPVFDRLQKIVNNKKQLLEDKLNSFLES 143
>UniRef50_Q2B8U3 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
protein - Bacillus sp. NRRL B-14911
Length = 398
Score = 33.9 bits (74), Expect = 5.4
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 255 NRNSRAPESKCKEGISDKVPYNPKITNLESLLADISVRYIQLKESDXELHYKVLDTIFQN 434
N+N + D P K NL++ + D + QLK +D + VLD IF +
Sbjct: 128 NKNRKGSLENYYRRHEDLKPLLKKHGNLDTTVRDFHLYIEQLKRNDSSVKVTVLDNIFDD 187
Query: 435 LHKKMKEIDP 464
K + ++ P
Sbjct: 188 AKKYLNQVIP 197
>UniRef50_A2RAG3 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 160
Score = 33.9 bits (74), Expect = 5.4
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +3
Query: 645 VQLKMGPQ-FQNLPMRDGVDWQINKTAYL--WKDESNFLLSTKF 767
V K+GP ++ P G+DW+I+ Y W D+ NFLL K+
Sbjct: 105 VTTKVGPSGSKDHPQSIGIDWKIDAPGYCSKWNDDLNFLLGGKW 148
>UniRef50_Q1Q1C1 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 587
Score = 33.5 bits (73), Expect = 7.2
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +3
Query: 327 ITNLESLLADISVRYIQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGS 506
ITN ++ +++ + +KE + E+H V ++F L +++K++D + S + G
Sbjct: 193 ITNTSQIIPGLTLAKL-IKEQNREIHITVGGSVFTKLIEELKKVDSLFTLVDSFIVFEGE 251
Query: 507 H 509
H
Sbjct: 252 H 252
>UniRef50_A2DC21 Cluster: Dynein heavy chain family protein; n=1;
Trichomonas vaginalis G3|Rep: Dynein heavy chain family
protein - Trichomonas vaginalis G3
Length = 4271
Score = 33.1 bits (72), Expect = 9.5
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 360 SVRYIQLKESDXELHYKV--LDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNV 521
++RY+ + ES L KV LD Q L +K KE++ NR + +++ + Y N+
Sbjct: 3112 NIRYVSILESTEPLRQKVESLDKEAQILEQKYKELETTTNRLETRLNNLTNEYKNL 3167
>UniRef50_A1ZA54 Cluster: CG12970-PA, isoform A; n=2;
Sophophora|Rep: CG12970-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 414
Score = 33.1 bits (72), Expect = 9.5
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 333 NLESLLADISVRYIQLKE--SDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGS 506
NLE+++ + +Y+++KE HY L + K + ST+ G
Sbjct: 4 NLENIVNQATAQYVKIKEHREPYTAHYNALKDKVYSEWKSSAVLGKLLK--GSTL--CGG 59
Query: 507 HYDNVRINKPDEFDMVIEIGVP 572
+ D ++++ PDEFD++I + P
Sbjct: 60 YGDKLKVSIPDEFDLLIHLVFP 81
>UniRef50_A0BPA6 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=5; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_12, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 3963
Score = 33.1 bits (72), Expect = 9.5
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 276 ESKCKEGISDKVPYNPKITNLESLLADISVRYIQ-LKESDXELHYKVLDTIFQNLHKKMK 452
+ KCKE I D +P + LE +S + + + D + K+L TI +L +K
Sbjct: 3693 KQKCKE-IIDLLPQQFNLVELEQKYPILSKNSLNTVLQQDVGRYNKLLRTINSSLSNLIK 3751
Query: 453 EIDPYYNRYSSTVHHAGSHYDN 518
+ID Y N + G+ DN
Sbjct: 3752 QIDGYINMSDDSQDILGNIMDN 3773
>UniRef50_A6S1M2 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 568
Score = 33.1 bits (72), Expect = 9.5
Identities = 11/50 (22%), Positives = 29/50 (58%)
Frame = +3
Query: 333 NLESLLADISVRYIQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYS 482
NL ++ + ++ ++S ELH+K DT+ + +K++ ++ Y+ ++
Sbjct: 266 NLRQMICSLQETQVKHRQSTLELHHKRSDTLMNRMDEKVESLERAYDEFT 315
>UniRef50_P59727 Cluster: PKHD-type hydroxylase NE2125; n=33;
Proteobacteria|Rep: PKHD-type hydroxylase NE2125 -
Nitrosomonas europaea
Length = 227
Score = 33.1 bits (72), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 450 KEIDPYYNRYSSTVHHAGSHYDNVRINKPD 539
K + P++NRYS +H G H DN PD
Sbjct: 78 KIVPPFFNRYSGETNHYGFHVDNAMRLLPD 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,353,164
Number of Sequences: 1657284
Number of extensions: 16018022
Number of successful extensions: 44311
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 42188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44280
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -