Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_B24
         (874 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3998|AAM70802.1|  459|Drosophila melanogaster CG30424-P...    41   0.003
BT022230-1|AAY54646.1|  346|Drosophila melanogaster IP12463p pro...    38   0.024
AE014296-1415|AAF50449.1|  346|Drosophila melanogaster CG7194-PA...    38   0.024
AE013599-2118|AAO41387.1|  394|Drosophila melanogaster CG12970-P...    34   0.22 
AE013599-2117|AAF58101.2|  414|Drosophila melanogaster CG12970-P...    33   0.51 

>AE013599-3998|AAM70802.1|  459|Drosophila melanogaster CG30424-PA
           protein.
          Length = 459

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
 Frame = +3

Query: 336 LESLLADISVRYIQLKESDXEL---HYKVLDT-IFQNLHKKMKEIDPYYNRYSSTVHHAG 503
           +E  L +   +Y+ + + + +    HY+ L + IF+ L K+  E+D     +S      G
Sbjct: 11  VEKKLYECKKKYVDIPKDEGQRYGKHYEALTSKIFEILRKENPELDIIIAEFSLE----G 66

Query: 504 SHYDNVRINKPDEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHAGYVQLKMGPQFQNLP 683
           S  D ++I KP+EFD+V ++  P  +++         +  +P+  G V L M    + L 
Sbjct: 67  SVGDMLKIAKPNEFDLVFKLKFP--YYKSI------AVTRDPKIPGNVLLDMTRVLELLK 118

Query: 684 MRDGVDWQINKTAYLWK--DESNFLLSTKFLDWFKSVVXRALNK 809
                D+Q  +     +  D  NF +  +   W +S+  +ALN+
Sbjct: 119 DDPREDFQRIRELIQGRLVDAQNFFVVDRLRSWLQSLFSQALNR 162


>BT022230-1|AAY54646.1|  346|Drosophila melanogaster IP12463p
           protein.
          Length = 346

 Score = 37.5 bits (83), Expect = 0.024
 Identities = 15/67 (22%), Positives = 37/67 (55%)
 Frame = +3

Query: 372 IQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVRINKPDEFDM 551
           + + +++  ++ K  + I   +  ++K +D  + +    +   GS+ D V++N PDEFD+
Sbjct: 14  LSISDNERAVYTKEAEEIQNYVVDELKRVDKTFRQVFDGLSLGGSYLDRVKLNLPDEFDL 73

Query: 552 VIEIGVP 572
            +++  P
Sbjct: 74  HMKLKFP 80


>AE014296-1415|AAF50449.1|  346|Drosophila melanogaster CG7194-PA
           protein.
          Length = 346

 Score = 37.5 bits (83), Expect = 0.024
 Identities = 15/67 (22%), Positives = 37/67 (55%)
 Frame = +3

Query: 372 IQLKESDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVRINKPDEFDM 551
           + + +++  ++ K  + I   +  ++K +D  + +    +   GS+ D V++N PDEFD+
Sbjct: 14  LSISDNERAVYTKEAEEIQNYVVDELKRVDKTFRQVFDGLSLGGSYLDRVKLNLPDEFDL 73

Query: 552 VIEIGVP 572
            +++  P
Sbjct: 74  HMKLKFP 80


>AE013599-2118|AAO41387.1|  394|Drosophila melanogaster CG12970-PB,
           isoform B protein.
          Length = 394

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
 Frame = +3

Query: 333 NLESLLADISVRYIQLKE--SDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGS 506
           NLE+++   + +Y+++KE       HY  L     +  K    +        ST+   G 
Sbjct: 4   NLENIVNQATAQYVKIKEHREPYTAHYNALKDKVYSEWKSSAVLGKLLK--GSTL--CGG 59

Query: 507 HYDNVRINKPDEFDMVIEIGVPLCFHEKTNNRXESDIKFEPRHAGYVQLK----MGPQFQ 674
           + D ++++ PDEFD++I     L F E      ++D   +P +      K    +G Q  
Sbjct: 60  YGDKLKVSIPDEFDLLIH----LVFPENDKIIVKADAS-KPGNVILDMTKVMEIIGSQEH 114

Query: 675 NLPMRDGVDWQINKTAYLWKDESNFLLST 761
           N P+ D +   +N    L +D+ N  L +
Sbjct: 115 NKPVFDRLQKIVNNKKQLLEDKLNSFLES 143


>AE013599-2117|AAF58101.2|  414|Drosophila melanogaster CG12970-PA,
           isoform A protein.
          Length = 414

 Score = 33.1 bits (72), Expect = 0.51
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 333 NLESLLADISVRYIQLKE--SDXELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGS 506
           NLE+++   + +Y+++KE       HY  L     +  K    +        ST+   G 
Sbjct: 4   NLENIVNQATAQYVKIKEHREPYTAHYNALKDKVYSEWKSSAVLGKLLK--GSTL--CGG 59

Query: 507 HYDNVRINKPDEFDMVIEIGVP 572
           + D ++++ PDEFD++I +  P
Sbjct: 60  YGDKLKVSIPDEFDLLIHLVFP 81


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,581,627
Number of Sequences: 53049
Number of extensions: 728639
Number of successful extensions: 1820
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)