Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_B16
(556 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 178 8e-44
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 159 4e-38
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 135 6e-31
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 132 7e-30
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 126 3e-28
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 122 6e-27
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 114 1e-24
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 105 9e-22
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 96 6e-19
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 82 1e-14
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 74 3e-12
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 3e-12
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 72 8e-12
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 3e-07
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 55 1e-06
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 51 2e-05
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.003
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 42 0.007
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 41 0.022
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 41 0.022
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 39 0.068
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.48
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 36 0.63
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 36 0.63
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 35 1.1
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 1.5
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 35 1.5
UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.9
UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3; Thermoto... 33 3.4
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 33 4.5
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 33 4.5
UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 33 5.9
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 7.8
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 32 7.8
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 178 bits (433), Expect = 8e-44
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = +3
Query: 135 LXFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYV 314
L F TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYV
Sbjct: 26 LDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYV 85
Query: 315 PEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 431
P VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 86 PAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 159 bits (386), Expect = 4e-38
Identities = 72/95 (75%), Positives = 86/95 (90%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 321 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 425
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 135 bits (327), Expect = 6e-31
Identities = 63/95 (66%), Positives = 75/95 (78%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 83 FHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 142
Query: 321 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 425
SAL+ +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 143 GSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 132 bits (318), Expect = 7e-30
Identities = 61/98 (62%), Positives = 79/98 (80%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQEEERE RDNYVPE
Sbjct: 29 FYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRDNYVPE 87
Query: 321 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 434
+S L+ + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 88 ISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 126 bits (305), Expect = 3e-28
Identities = 58/95 (61%), Positives = 76/95 (80%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE+ERER+DNYVPE
Sbjct: 82 FCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVPE 141
Query: 321 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 425
+SA + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 142 ISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 122 bits (294), Expect = 6e-27
Identities = 56/95 (58%), Positives = 77/95 (81%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE ERR +Y+PE
Sbjct: 65 FYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE--ERRADYIPE 122
Query: 321 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 425
VSAL+ +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 123 VSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 114 bits (275), Expect = 1e-24
Identities = 54/96 (56%), Positives = 73/96 (76%)
Frame = +3
Query: 135 LXFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYV 314
L F TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQEEERERR ++V
Sbjct: 26 LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFV 85
Query: 315 PEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 422
PE SALE + I VD +T +ML L ++ G++ Q
Sbjct: 86 PEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 105 bits (251), Expect = 9e-22
Identities = 51/95 (53%), Positives = 71/95 (74%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V + ER +++ YVPE
Sbjct: 77 FHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------RGGER-KKETYVPE 129
Query: 321 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 425
VSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 130 VSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 95.9 bits (228), Expect = 6e-19
Identities = 44/80 (55%), Positives = 61/80 (76%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QEEERERR +YVPE
Sbjct: 68 FHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRLDYVPE 127
Query: 321 VSALEHDIIEVDPDTKDMLK 380
S+++ D + D D K ML+
Sbjct: 128 KSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQEEERERR ++ P
Sbjct: 28 FYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRMDHAPA 87
Query: 321 VSALEHDI---IEVDPDTKDMLKMLD 389
S ++ I + VD T ML+ L+
Sbjct: 88 TSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S R R NYVPE
Sbjct: 28 FYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVPE 86
Query: 321 VSALEHDIIEVDPDTKDMLKMLDFNNIN 404
S L+ +I EVD TK+MLK+ F +++
Sbjct: 87 GSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 3e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3
Query: 216 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 395
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 72.1 bits (169), Expect = 8e-12
Identities = 31/80 (38%), Positives = 53/80 (66%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
FD N + +++A++ +K L+N+IAG+ T L +++ + IK EEERER++N +P+
Sbjct: 28 FDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPK 87
Query: 321 VSALEHDIIEVDPDTKDMLK 380
S L+ D +EVD T +M+K
Sbjct: 88 ESMLDVDCVEVDDVTMEMIK 107
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 3e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +3
Query: 318 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 425
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 54.8 bits (126), Expect = 1e-06
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +3
Query: 135 LXFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI--SIKLQEEERERRDN 308
+ F NK C+EIA+I +K LRNKIAG+ THL++ + + I +IK E +
Sbjct: 26 IDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEINNK 85
Query: 309 YVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 404
S E + VD +TK M+K L F N N
Sbjct: 86 ESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 245
F+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 28 FETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATH 227
F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 22 FHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 42.3 bits (95), Expect = 0.007
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 233
FDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 28 FDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 40.7 bits (91), Expect = 0.022
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 320
F+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +S++ QE + Y+
Sbjct: 28 FELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-LSMR-QEITMTDEEEYIRR 85
Query: 321 V 323
+
Sbjct: 86 I 86
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 40.7 bits (91), Expect = 0.022
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 263
F+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 28 FEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 39.1 bits (87), Expect = 0.068
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERER 299
F+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q E R
Sbjct: 28 FEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAEEFR 80
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 36.3 bits (80), Expect = 0.48
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 258 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 434
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQ 170
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 35.9 bits (79), Expect = 0.63
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 153 KRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEEERERRDNYVPEVSA 329
K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L ER +D V
Sbjct: 49 KDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSL-AAERISKDIVCQNVGF 106
Query: 330 LEHDIIEVDP 359
L+ +++ +P
Sbjct: 107 LQINMLMSEP 116
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 35.9 bits (79), Expect = 0.63
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFAT-HLMRRLRHSQVR---GISIKLQEEERERRDN 308
F NK+I E++I+ +K L+N+IAG+ T ++ + +R + + + K E+E +
Sbjct: 23 FADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEASKSLEQEAQVEPE 82
Query: 309 YVPEVSALEHDIIEVDPDTK 368
V E E P+T+
Sbjct: 83 PVEATENTEAPAAEETPETE 102
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 35.1 bits (77), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 239
FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 28 FDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 34.7 bits (76), Expect = 1.5
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFAT 224
FD NK++ EI I +K +RN++AG+ T
Sbjct: 27 FDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 34.7 bits (76), Expect = 1.5
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 233
F+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 28 FEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 405
Score = 34.3 bits (75), Expect = 1.9
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 156 RICEEIA-IIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA- 329
RIC I ++ +P+ + G L +R++ + + +K + EE +++ E S
Sbjct: 104 RICPVIRELLDARPVTARTGGDIRQLEKRIQELEKKNAELKKENEENKKKLRAKSESSQS 163
Query: 330 --LEHDIIEVDPDTKDMLKMLDFNNINGLQ 413
LE + + PD KD+++ + N+ +Q
Sbjct: 164 KDLEEKLFLLLPDEKDIVEASESGNLKAVQ 193
>UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3;
Thermotogaceae|Rep: Flagellar M-ring protein -
Thermotoga maritima
Length = 532
Score = 33.5 bits (73), Expect = 3.4
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 207 IAGFATHLMRRLRHSQVRGISIKLQEEERERR-DNYVPEVSALEHDIIEVDPDTKDMLKM 383
+ GF T ++ L Q+R I + EER R+ + V E+ E EV P+ K++L++
Sbjct: 446 LLGFLTFMLIYLMIVQIRRIRARKLAEERRRKLEEEVKEILQEELKEEEVSPEEKELLEL 505
Query: 384 LD 389
L+
Sbjct: 506 LE 507
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 233
F NK E++A + TK +RN+IAG+ T M
Sbjct: 28 FTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 233
F+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 27 FEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 644
Score = 32.7 bits (71), Expect = 5.9
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 186 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERR 302
TKP N+ GF + ++ +Q++ S K++EEERE+R
Sbjct: 206 TKPKVNRPQGFTIGQILKIEENQIQYKSKKIEEEEREQR 244
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 32.7 bits (71), Expect = 5.9
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 245
F+TNK + + I +K +RN++AG+ T + R++
Sbjct: 28 FETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 7.8
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 222 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 377
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 32.3 bits (70), Expect = 7.8
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 141 FDTNKRICEEIAIIPTKPLRNKIAGFATH 227
F+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 27 FELNKKLVDKYTNVESKDVRNRIAGYITH 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,488,100
Number of Sequences: 1657284
Number of extensions: 8162522
Number of successful extensions: 22024
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 21495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22014
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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