Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_B10
(842 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O46082 Cluster: EG:63B12.2 protein; n=6; Endopterygota|... 213 6e-54
UniRef50_UPI00003C069B Cluster: PREDICTED: similar to mitochondr... 179 7e-44
UniRef50_Q9NX20 Cluster: 39S ribosomal protein L16, mitochondria... 137 3e-31
UniRef50_Q5C205 Cluster: SJCHGC03477 protein; n=1; Schistosoma j... 127 4e-28
UniRef50_Q22140 Cluster: Putative uncharacterized protein; n=2; ... 94 5e-18
UniRef50_A7HZL3 Cluster: Ribosomal protein L16; n=1; Campylobact... 49 1e-04
UniRef50_A7SFH6 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.002
UniRef50_Q5L416 Cluster: 50S ribosomal protein L16; n=16; Bacter... 45 0.002
UniRef50_Q0QIQ5 Cluster: Ribosomal protein L16; n=1; Oltmannsiel... 44 0.005
UniRef50_Q9RXJ5 Cluster: 50S ribosomal protein L16; n=19; Bacter... 43 0.011
UniRef50_Q748Z5 Cluster: 50S ribosomal protein L16; n=538; cellu... 42 0.015
UniRef50_Q7V9W9 Cluster: 50S ribosomal protein L16; n=403; cellu... 39 0.14
UniRef50_Q6UVU0 Cluster: Ribosomal protein L16; n=1; Pseudendocl... 38 0.42
UniRef50_Q4P2Y8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.42
UniRef50_P58140 Cluster: Plastid 50S ribosomal protein L16; n=1;... 38 0.42
UniRef50_Q67JV0 Cluster: 50S ribosomal protein L16; n=82; cellul... 36 1.3
UniRef50_Q87VF1 Cluster: Membrane protein, putative; n=3; Pseudo... 35 2.9
UniRef50_Q7YAM1 Cluster: Ribosomal protein L16; n=2; Streptophyt... 35 2.9
UniRef50_A6FXN8 Cluster: Phytanoyl-CoA dioxygenase; n=1; Plesioc... 33 6.8
UniRef50_A7Q639 Cluster: Chromosome undetermined scaffold_55, wh... 33 6.8
UniRef50_Q25810 Cluster: Rpl16 protein; n=2; Plasmodium|Rep: Rpl... 33 6.8
>UniRef50_O46082 Cluster: EG:63B12.2 protein; n=6;
Endopterygota|Rep: EG:63B12.2 protein - Drosophila
melanogaster (Fruit fly)
Length = 254
Score = 213 bits (519), Expect = 6e-54
Identities = 93/176 (52%), Positives = 123/176 (69%)
Frame = +1
Query: 298 AGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEVHTTLQL 477
AGLKYF PP Y ++E PER +LRV ++ PQ PPN++PPKMQKRLRYMRGPE VH TL
Sbjct: 37 AGLKYFAPPIKYQNVEQPERPKLRVIERQPQLPPNIRPPKMQKRLRYMRGPEMVHNTLLH 96
Query: 478 KQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXX 657
KQY + ATGGGR++ H+EM RL + RK+++ MFA WR+ PWQPIT
Sbjct: 97 KQYAIVATGGGRLRWGHYEMMRLTIGRKMNVNTMFATWRVPAPWQPITKKGQGQRMGGGK 156
Query: 658 XAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVLKRFXSRKQL 825
AIDHYVTPIK+GR+I+E+ GKCE+ EV L+ ++ +LPF+A V + +++
Sbjct: 157 GAIDHYVTPIKAGRVIVEIAGKCEFVEVKQFLQQVANQLPFQATVVSQEMLDEQRV 212
>UniRef50_UPI00003C069B Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L16 CG3109-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L16 CG3109-PA - Apis mellifera
Length = 240
Score = 179 bits (436), Expect = 7e-44
Identities = 86/177 (48%), Positives = 114/177 (64%)
Frame = +1
Query: 301 GLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEVHTTLQLK 480
G+K P D +E PER RLRV +VPQ+ KP KMQK+LR MRGPE H TL K
Sbjct: 25 GVKSLKPSSKMD-VEYPERNRLRVVLRVPQFLTIGKPYKMQKKLRLMRGPELFHNTLLHK 83
Query: 481 QYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXX 660
QYG+ ATGGGRMK HFEM R+ + R +D ++FA+WR+ PWQPIT
Sbjct: 84 QYGIIATGGGRMKFSHFEMIRMTILRNIDYNKVFALWRVPSPWQPITMKSHGLRMGSGKG 143
Query: 661 AIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVLKRFXSRKQLKK 831
+I+HYVTP+K+ ++ILEVGG EY EV ++L+ I++RLPF A V + + + +K
Sbjct: 144 SINHYVTPVKAKQVILEVGGNIEYFEVKNILKNIAKRLPFDAMAVSQEIMDKMEAEK 200
>UniRef50_Q9NX20 Cluster: 39S ribosomal protein L16, mitochondrial
precursor; n=27; Deuterostomia|Rep: 39S ribosomal
protein L16, mitochondrial precursor - Homo sapiens
(Human)
Length = 251
Score = 137 bits (332), Expect = 3e-31
Identities = 67/172 (38%), Positives = 98/172 (56%)
Frame = +1
Query: 280 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 459
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 460 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 639
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138
Query: 640 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPV 795
AIDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ V
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAV 190
>UniRef50_Q5C205 Cluster: SJCHGC03477 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03477 protein - Schistosoma
japonicum (Blood fluke)
Length = 198
Score = 127 bits (306), Expect = 4e-28
Identities = 58/135 (42%), Positives = 81/135 (60%)
Frame = +1
Query: 349 PERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEVHTTLQLKQYGVRATGGGRMKHEH 528
P+R+RL +K PQ P + KPPK +R RGPE V L QYG++AT GG ++ H
Sbjct: 60 PDRRRLHPVNKQPQLPGSTKPPKYTRRKIDCRGPETVFNKLIYSQYGIQATEGGELEFGH 119
Query: 529 FEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIIL 708
FEM R+ + + LD KRMFA+W +D PW+P+T I HY TP+K+ RII+
Sbjct: 120 FEMMRVAINKHLDEKRMFALWCVDAPWKPVTRRAQGKRKGGGKANIHHYTTPVKAERIIV 179
Query: 709 EVGGKCEYAEVHDML 753
E+GG + E + +L
Sbjct: 180 ELGGYLNWREAYRIL 194
>UniRef50_Q22140 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 219
Score = 93.9 bits (223), Expect = 5e-18
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Frame = +1
Query: 304 LKYFPPPKNYDHIEIPERQRLR--VYDKVPQYPPNL--KPPKMQKRLRYMRGPEEVHTTL 471
+K + P Y+++ P +L+ V P Y K K KR+ RG EEVHT L
Sbjct: 1 MKKYSFPVTYENVRFPPNGQLKLPVMPAEPFYDAEKGEKKYKSTKRMIEARGVEEVHTEL 60
Query: 472 QLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXX 651
+QYG+ A GG + + F+ + + + L + F++WR+D PW P T
Sbjct: 61 IHEQYGLAAVSGGFIDSDDFKFIQDRINKNL-IDNQFSVWRVDAPWLPRTKKAQGTRLGG 119
Query: 652 XXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVLKRFXSRKQLK 828
+I YVTP+++ RIILEVGG E L + ER F E V + + ++ K
Sbjct: 120 GKGSIQKYVTPVRANRIILEVGGHITEIEAKAFLLYLCERFSFPVEFVSETMLAERRKK 178
>UniRef50_A7HZL3 Cluster: Ribosomal protein L16; n=1; Campylobacter
hominis ATCC BAA-381|Rep: Ribosomal protein L16 -
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 /
NCTC 13146 /CH001A)
Length = 141
Score = 49.2 bits (112), Expect = 1e-04
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Frame = +1
Query: 412 PKMQKRLRYMRGPEEVHTTLQLK----QYGVRATGGGRMKHEHFEMARLVVARKLDMKRM 579
PK K + M+G + +K YG++A GR+ E AR+ + R ++ R
Sbjct: 4 PKKTKYSKMMKGRNRGYAVRGIKLNFGDYGIKAVEAGRINSNQIEAARIAMTRYVN--RE 61
Query: 580 FAIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRI 759
+W P +P+T ++ +V IK GRII E+ G E L +
Sbjct: 62 AKVWINVFPDKPLTKKPLQTRMGKGKTGVEEWVMNIKPGRIIFELTGVNEDV-ARRALEL 120
Query: 760 ISERLPFKAEPVLK 801
+LPFK + V +
Sbjct: 121 SMHKLPFKTKIVTR 134
>UniRef50_A7SFH6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 99
Score = 45.2 bits (102), Expect = 0.002
Identities = 32/101 (31%), Positives = 44/101 (43%)
Frame = +1
Query: 481 QYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXX 660
+YGV A G +K E ARL + RK K++ I P+T
Sbjct: 1 RYGVYAAQPGLVKASALESARLAIIRKTKNKQIIMI----KAHVPMTKKALGSRMGKGKG 56
Query: 661 AIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFK 783
+DHYV +K+G+I+ E E A + R S RLP K
Sbjct: 57 KMDHYVANVKAGKILFEYSSDSE-ALALEAFRQASNRLPVK 96
>UniRef50_Q5L416 Cluster: 50S ribosomal protein L16; n=16;
Bacteria|Rep: 50S ribosomal protein L16 - Geobacillus
kaustophilus
Length = 141
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Frame = +1
Query: 418 MQKRLRY-------MRGPEEVHTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKR 576
M KR++Y M+G + T + ++G++A + + E AR + R M+R
Sbjct: 3 MPKRVKYRREHRGRMKGRAKGGTEVHFGEFGLQALESAWITNRQIEAARRAMTRY--MRR 60
Query: 577 MFAIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLR 756
+W P +P T A + +V +K G+++ EVGG E + LR
Sbjct: 61 GGKVWIRIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKVMFEVGGVSEEV-AREALR 119
Query: 757 IISERLPFKAE 789
+ S +LP K +
Sbjct: 120 LASHKLPIKCK 130
>UniRef50_Q0QIQ5 Cluster: Ribosomal protein L16; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein L16 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 133
Score = 44.0 bits (99), Expect = 0.005
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +1
Query: 403 LKPPKMQKRLRYMRGPEEV---HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMK 573
L+P ++ + + R V +T L QYG++A GG + + E +R + R K
Sbjct: 2 LRPKNVKFKKHHRRSLTRVSNNNTYLSFGQYGLKALEGGAITEKTIETSRRTITRTF--K 59
Query: 574 RMFAIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGG 720
R +W P P+T +I H+ + +K G I+ E G
Sbjct: 60 RRGKVWIRIVPDLPVTAKPSEARLGKGVGSISHWTSVVKKGEILFEFSG 108
>UniRef50_Q9RXJ5 Cluster: 50S ribosomal protein L16; n=19;
Bacteria|Rep: 50S ribosomal protein L16 - Deinococcus
radiodurans
Length = 141
Score = 42.7 bits (96), Expect = 0.011
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Frame = +1
Query: 406 KPPKMQKRLR-YMRGPEEVHTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMF 582
K K +K+ R M G + + YG+ A +K E R+V++R
Sbjct: 5 KRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKI 64
Query: 583 AIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRII 762
I RI P +P+T A++++V+ +K GR++ EV G E + + R+
Sbjct: 65 YI-RIFPD-KPVTKKPAETRMGKGKGAVEYWVSVVKPGRVMFEVAGVTE-EQAKEAFRLA 121
Query: 763 SERLPFKAEPVLKRFXSRKQ 822
+LP + + V + Q
Sbjct: 122 GHKLPIQTKMVKREVYDEAQ 141
>UniRef50_Q748Z5 Cluster: 50S ribosomal protein L16; n=538; cellular
organisms|Rep: 50S ribosomal protein L16 - Geobacter
sulfurreducens
Length = 140
Score = 42.3 bits (95), Expect = 0.015
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Frame = +1
Query: 406 KPPKMQKRLR-YMRGPEEVHTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMF 582
K K +K+++ M+G + +L ++G++AT G + E AR+ + R + KR
Sbjct: 5 KRVKHRKQMKGRMKGDAQRGASLAFGEFGLQATECGWVDSRQIEAARIAMTRYI--KRGG 62
Query: 583 AIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRII 762
IW P +P+T + D +V +K G+++ E+ G E + R+
Sbjct: 63 KIWIRLFPDKPLTSKPAETRMGKGKGSPDSWVCVVKPGKVLYEMEGVTEEI-AREAFRLA 121
Query: 763 SERLPFKAEPVLKRFXSRK 819
+ +L PV +F SRK
Sbjct: 122 AHKL-----PVGTKFISRK 135
>UniRef50_Q7V9W9 Cluster: 50S ribosomal protein L16; n=403; cellular
organisms|Rep: 50S ribosomal protein L16 -
Prochlorococcus marinus
Length = 182
Score = 39.1 bits (87), Expect = 0.14
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 406 KPPKMQKRLR-YMRGPEEVHTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMF 582
K K +K+ R MRG + Q+ ++A G + E +R + R + KR
Sbjct: 5 KRTKFRKQQRGRMRGVATRGNKIAFGQFALQAQECGWITSRQIEASRRAMTRYV--KRGG 62
Query: 583 AIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEV-HDMLRI 759
IW P +P+T + +V +K GRI+ E+GG+ E+ + +R+
Sbjct: 63 QIWIRIFPDKPVTMRPAETRMGSGKGNPEFWVAVVKPGRILFEMGGEEITEEIAKEAMRL 122
Query: 760 ISERLPFKAE 789
+LP K +
Sbjct: 123 AQYKLPIKTK 132
>UniRef50_Q6UVU0 Cluster: Ribosomal protein L16; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein L16 -
Pseudendoclonium akinetum (Green alga)
Length = 302
Score = 37.5 bits (83), Expect = 0.42
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +1
Query: 460 HTTLQLKQYGVRATG-----GGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITX 624
HT+L + + A G G + + E RL+VARKL K+ W P P+T
Sbjct: 188 HTSLAIDKVQFGACGFYFCSSGTITAKFIETIRLIVARKL--KKTGRFWIRVCPDTPVTA 245
Query: 625 XXXXXXXXXXXXAIDHYVTPIKSGRIILEVGG 720
AI HY ++ G++ +E G
Sbjct: 246 RSAETRMGRGKGAISHYEAKVRPGQMFMEFSG 277
>UniRef50_Q4P2Y8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 238
Score = 37.5 bits (83), Expect = 0.42
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +1
Query: 463 TTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXX 642
TT+Q YG+R R+ + A + RKL + + ++ P P+
Sbjct: 98 TTVQEGAYGIRLLAPARLSAKQLVAAETALKRKLKVVKGAQVFLRVFPDIPVCIKGNETR 157
Query: 643 XXXXXXAIDHYVTPIKSGRIILEVGGKCEY-AEV-HDMLRIISERLPFKAE 789
+++ G++I E+GG E EV + LR+ S +LP E
Sbjct: 158 MGKGKGTFEYWACRANMGKVIFEIGGPVEIRPEVAKEALRLASAKLPVPTE 208
>UniRef50_P58140 Cluster: Plastid 50S ribosomal protein L16; n=1;
Euglena longa|Rep: Plastid 50S ribosomal protein L16 -
Astasia longa (Euglenophycean alga)
Length = 133
Score = 37.5 bits (83), Expect = 0.42
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Frame = +1
Query: 412 PKMQKRLRYMRGP--EEVHTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFA 585
PK K +Y RG +++ + ++ +++ G + + E R V+ R K+
Sbjct: 4 PKKTKFHKYHRGKIKGKIYDNVNFGEFALQSLEFGWITSKQIEAIRKVITRY--SKKGGK 61
Query: 586 IWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIIS 765
+W P +PIT ++++V IK G+II E+ G + L+I
Sbjct: 62 LWIRIFPDKPITFRPAETRMGSGKGNVEYWVAVIKPGKIICEISGIPNSISKY-CLKIAG 120
Query: 766 ERLPFKAEPVLK 801
+LP K + + K
Sbjct: 121 YKLPVKTKILYK 132
>UniRef50_Q67JV0 Cluster: 50S ribosomal protein L16; n=82; cellular
organisms|Rep: 50S ribosomal protein L16 -
Symbiobacterium thermophilum
Length = 155
Score = 35.9 bits (79), Expect = 1.3
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 394 PPNLKPPKMQKRLRYM-RGPEEVHTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDM 570
P +K ++ K + + +G + + YG++A + E AR+ + R +
Sbjct: 4 PKRVKWRRVHKAVAKLNKGRSKAGNEVVFGDYGLQALEPAFITDRQIEAARVAMTRFI-- 61
Query: 571 KRMFAIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDM 750
KR +W P + +T A + +V +K GRI+ E+ G E +
Sbjct: 62 KRGGKVWIKIFPHKALTRKPAEVRMGSGKGAPEVWVAVVKPGRILFELAGVDE-ETAQEA 120
Query: 751 LRIISERLPFKAE 789
+R+ + +LP K +
Sbjct: 121 MRLAAHKLPIKCK 133
>UniRef50_Q87VF1 Cluster: Membrane protein, putative; n=3;
Pseudomonas syringae group|Rep: Membrane protein,
putative - Pseudomonas syringae pv. tomato
Length = 391
Score = 34.7 bits (76), Expect = 2.9
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 774 QSFRYYSQHVVYLSIFTFATNFKNDSTRFNRG 679
Q F+YY +H+VY+S+F FA + D+ F RG
Sbjct: 85 QEFQYY-KHIVYVSLFVFAVSGLTDNGVFRRG 115
>UniRef50_Q7YAM1 Cluster: Ribosomal protein L16; n=2;
Streptophytina|Rep: Ribosomal protein L16 - Chara
vulgaris (Common stonewort)
Length = 134
Score = 34.7 bits (76), Expect = 2.9
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = +1
Query: 412 PKMQKRLRYMRGPEE-VHTTLQL--KQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMF 582
PK K +Y +G + H QL +YG+++ GR+ ++ E AR + RK +R
Sbjct: 4 PKRTKFRKYQKGRSKGSHAAAQLCFGKYGIQSCEAGRISYQGIEAARRAITRK--FRRNG 61
Query: 583 AIWRIDPPWQPITXXXXXXXXXXXXXAIDHYVTPIKSGRIILEVGG 720
IW PIT ++ + G+I+ E+ G
Sbjct: 62 QIWVRVFSDIPITSKPTEVRMGKGKGNPTGWIARVSQGQILFEMDG 107
>UniRef50_A6FXN8 Cluster: Phytanoyl-CoA dioxygenase; n=1;
Plesiocystis pacifica SIR-1|Rep: Phytanoyl-CoA
dioxygenase - Plesiocystis pacifica SIR-1
Length = 273
Score = 33.5 bits (73), Expect = 6.8
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 298 AGLKYFPPPKNYDHIEIPERQRL-RVYDKVPQYP 396
A +KYF PP N D + PE +RL RV + +P +P
Sbjct: 50 AWMKYFEPPSNLDTPDTPEPRRLCRVENFLPHHP 83
>UniRef50_A7Q639 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 345
Score = 33.5 bits (73), Expect = 6.8
Identities = 20/37 (54%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = -1
Query: 563 NFL---ATTKRAI--SKCSCFILPPPVARTPYCFNCN 468
NFL TTKR I SKCS I PP A+T +C CN
Sbjct: 4 NFLKKRTTTKRVIQCSKCSSNIEVPPTAQTIHCRQCN 40
>UniRef50_Q25810 Cluster: Rpl16 protein; n=2; Plasmodium|Rep: Rpl16
protein - Plasmodium falciparum
Length = 129
Score = 33.5 bits (73), Expect = 6.8
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = +1
Query: 661 AIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVLK 801
+I+ YV+PIK +++ E+ K ++ + +++S +LPFK + + K
Sbjct: 84 SIELYVSPIKKNKLLFEI-SKISNNIIYTITKVLSYKLPFKLQYIRK 129
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,518,203
Number of Sequences: 1657284
Number of extensions: 16318835
Number of successful extensions: 40909
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 39358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40891
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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