Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_B10
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1097 + 24284494-24284496,24284946-24285407,24285476-242864...    29   3.5  
04_03_0503 - 16611860-16611961,16612506-16612615,16612879-16612954     29   4.6  
08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-55...    28   8.1  
05_03_0602 - 16048871-16049062,16050571-16050703,16050894-16051183     28   8.1  

>08_02_1097 +
           24284494-24284496,24284946-24285407,24285476-24286450,
           24286566-24286655,24286760-24287021,24287447-24287472
          Length = 605

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 715 GGKCEYAEVHDMLRIISERLPFKAEP 792
           G  CEYA   D LR+I  R  ++ EP
Sbjct: 537 GDGCEYAHSQDELRVIDARPKYRTEP 562


>04_03_0503 - 16611860-16611961,16612506-16612615,16612879-16612954
          Length = 95

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 622 WLWVAM-EDLFSRWQTYASCLISWQQLSEPFQNVRVSFFHLQWHGHHIVSTVMLC 461
           W  V   +++   W   +  L  WQ++  P   V + FF L   G+  +    LC
Sbjct: 30  WAQVVFGKEILGEWHLRSGILRGWQKVISPHSEVELVFFFLFMEGYLTLLRRRLC 84


>08_01_0079 -
           554936-554977,555108-555297,555384-555430,556039-556139,
           556223-556271,556432-556494,556602-556695,556822-556924,
           557719-557791,557872-557984,558068-558149,558386-558913,
           559015-559098,560156-560305,561021-561191,561759-561809,
           562601-562738,562823-562894,563236-563391,563681-563839,
           564080-564180,564577-564829
          Length = 939

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 370 VYDKVPQYPPNLKPPKMQKRLRYMRGPEEVHTTL 471
           +Y  +P+ PP   P +M  RL Y+R P    T L
Sbjct: 879 LYRDIPEEPPTDDPERMPIRLFYVRDPIAEETPL 912


>05_03_0602 - 16048871-16049062,16050571-16050703,16050894-16051183
          Length = 204

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 457 VHTTLQLKQYGVRATGG 507
           ++TTLQL ++GVR TGG
Sbjct: 108 IYTTLQLVRHGVRLTGG 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,035,774
Number of Sequences: 37544
Number of extensions: 450098
Number of successful extensions: 1123
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)