Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_B10
         (842 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457117-1|CAG33398.1|  251|Homo sapiens MRPL16 protein.              137   4e-32
BC019269-1|AAH19269.1|  251|Homo sapiens mitochondrial ribosomal...   137   4e-32
BC001040-1|AAH01040.1|  251|Homo sapiens mitochondrial ribosomal...   137   4e-32
AK000491-1|BAA91202.1|  251|Homo sapiens protein ( Homo sapiens ...   137   4e-32
AF183428-1|AAG09697.1|  251|Homo sapiens 28.4 kDa protein protein.    137   4e-32
AB049642-1|BAB40847.1|  251|Homo sapiens mitochondrial ribosomal...   137   4e-32
AF399563-1|AAK95048.1|  216|Homo sapiens olfactory receptor prot...    31   6.9  
AF399562-1|AAK95047.1|  216|Homo sapiens olfactory receptor prot...    31   6.9  
AB065727-1|BAC05948.1|  311|Homo sapiens seven transmembrane hel...    31   6.9  
AB065724-1|BAC05945.1|  311|Homo sapiens seven transmembrane hel...    31   6.9  

>CR457117-1|CAG33398.1|  251|Homo sapiens MRPL16 protein.
          Length = 251

 Score =  137 bits (332), Expect = 4e-32
 Identities = 67/172 (38%), Positives = 98/172 (56%)
 Frame = +1

Query: 280 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 459
           A L   AG+K   P  +++ + IPE+ +LR  ++ P  P   + PK    L  +RGP   
Sbjct: 22  ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78

Query: 460 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 639
            T      + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT      
Sbjct: 79  ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138

Query: 640 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPV 795
                  AIDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ V
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAV 190


>BC019269-1|AAH19269.1|  251|Homo sapiens mitochondrial ribosomal
           protein L16 protein.
          Length = 251

 Score =  137 bits (332), Expect = 4e-32
 Identities = 67/172 (38%), Positives = 98/172 (56%)
 Frame = +1

Query: 280 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 459
           A L   AG+K   P  +++ + IPE+ +LR  ++ P  P   + PK    L  +RGP   
Sbjct: 22  ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78

Query: 460 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 639
            T      + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT      
Sbjct: 79  ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138

Query: 640 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPV 795
                  AIDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ V
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAV 190


>BC001040-1|AAH01040.1|  251|Homo sapiens mitochondrial ribosomal
           protein L16 protein.
          Length = 251

 Score =  137 bits (332), Expect = 4e-32
 Identities = 67/172 (38%), Positives = 98/172 (56%)
 Frame = +1

Query: 280 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 459
           A L   AG+K   P  +++ + IPE+ +LR  ++ P  P   + PK    L  +RGP   
Sbjct: 22  ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78

Query: 460 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 639
            T      + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT      
Sbjct: 79  ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138

Query: 640 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPV 795
                  AIDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ V
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAV 190


>AK000491-1|BAA91202.1|  251|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20484 fis, clone KAT07770. ).
          Length = 251

 Score =  137 bits (332), Expect = 4e-32
 Identities = 67/172 (38%), Positives = 98/172 (56%)
 Frame = +1

Query: 280 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 459
           A L   AG+K   P  +++ + IPE+ +LR  ++ P  P   + PK    L  +RGP   
Sbjct: 22  ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78

Query: 460 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 639
            T      + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT      
Sbjct: 79  ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138

Query: 640 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPV 795
                  AIDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ V
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAV 190


>AF183428-1|AAG09697.1|  251|Homo sapiens 28.4 kDa protein protein.
          Length = 251

 Score =  137 bits (332), Expect = 4e-32
 Identities = 67/172 (38%), Positives = 98/172 (56%)
 Frame = +1

Query: 280 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 459
           A L   AG+K   P  +++ + IPE+ +LR  ++ P  P   + PK    L  +RGP   
Sbjct: 22  ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78

Query: 460 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 639
            T      + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT      
Sbjct: 79  ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138

Query: 640 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPV 795
                  AIDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ V
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAV 190


>AB049642-1|BAB40847.1|  251|Homo sapiens mitochondrial ribosomal
           protein L16 (L16mt) protein.
          Length = 251

 Score =  137 bits (332), Expect = 4e-32
 Identities = 67/172 (38%), Positives = 98/172 (56%)
 Frame = +1

Query: 280 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 459
           A L   AG+K   P  +++ + IPE+ +LR  ++ P  P   + PK    L  +RGP   
Sbjct: 22  ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78

Query: 460 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 639
            T      + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT      
Sbjct: 79  ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138

Query: 640 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPV 795
                  AIDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ V
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAV 190


>AF399563-1|AAK95048.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 670 HYVTPIKSGRIILEVGGKCEYAEVHDMLRI-ISERLPFKAEPVLKRF 807
           HY   +K    +L + G C  + +H + R+ +  RL F A  ++K F
Sbjct: 64  HYDVVMKPRHCLLMLLGSCSISHLHSLFRVLLMSRLSFCASHIIKHF 110


>AF399562-1|AAK95047.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 670 HYVTPIKSGRIILEVGGKCEYAEVHDMLRI-ISERLPFKAEPVLKRF 807
           HY   +K    +L + G C  + +H + R+ +  RL F A  ++K F
Sbjct: 64  HYDVVMKPWHCLLMLLGSCSISHLHSLFRVLLMSRLSFCASHIIKHF 110


>AB065727-1|BAC05948.1|  311|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 670 HYVTPIKSGRIILEVGGKCEYAEVHDMLRI-ISERLPFKAEPVLKRF 807
           HY   +K    +L + G C  + +H + R+ +  RL F A  ++K F
Sbjct: 132 HYDVVMKPRHCLLMLLGSCSISHLHSLFRVLLMSRLSFCASHIIKHF 178


>AB065724-1|BAC05945.1|  311|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 670 HYVTPIKSGRIILEVGGKCEYAEVHDMLRI-ISERLPFKAEPVLKRF 807
           HY   +K    +L + G C  + +H + R+ +  RL F A  ++K F
Sbjct: 132 HYDVVMKPWHCLLMLLGSCSISHLHSLFRVLLMSRLSFCASHIIKHF 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,097,509
Number of Sequences: 237096
Number of extensions: 2634016
Number of successful extensions: 9027
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9018
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)