Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_B10
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical pr...    93   2e-19
Z81106-2|CAB03220.2|  468|Caenorhabditis elegans Hypothetical pr...    31   0.78 
CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm recept...    28   7.2  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z79759-3|CAB02136.1|  225|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical
           protein T04A8.11 protein.
          Length = 219

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
 Frame = +1

Query: 304 LKYFPPPKNYDHIEIPERQRLR--VYDKVPQYPPNL--KPPKMQKRLRYMRGPEEVHTTL 471
           +K +  P  Y+++  P   +L+  V    P Y      K  K  KR+   RG EEVHT L
Sbjct: 1   MKKYSFPVTYENVRFPPNGQLKLPVMPAEPFYDAEKGEKKYKSTKRMIEARGVEEVHTEL 60

Query: 472 QLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXX 651
             +QYG+ A  GG +  + F+  +  + + L +   F++WR+D PW P T          
Sbjct: 61  IHEQYGLAAVSGGFIDSDDFKFIQDRINKNL-IDNQFSVWRVDAPWLPRTKKAQGTRLGG 119

Query: 652 XXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVLKRFXSRKQLK 828
              +I  YVTP+++ RIILEVGG     E    L  + ER  F  E V +   + ++ K
Sbjct: 120 GKGSIQKYVTPVRANRIILEVGGHITEIEAKAFLLYLCERFSFPVEFVSETMLAERRKK 178


>Z81106-2|CAB03220.2|  468|Caenorhabditis elegans Hypothetical
           protein R06C1.3 protein.
          Length = 468

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +1

Query: 316 PPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEVHTTLQ 474
           PPP N DH+  P+   L + D     PP   PP +       + P E  +T+Q
Sbjct: 294 PPPVNLDHLPPPDMSILSIDDDDDDLPPP-PPPLLMNTSIVHQLPAEAPSTIQ 345


>CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical
           protein C42C1.8 protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 479 FNCNVVWTSSGPLMYLSLFCILGGFKFGGYCGTLSY 372
           F    +W S  P M L LF I G F   G+CG  +Y
Sbjct: 374 FGVGFLWMSKVPNMSLILFFISGAF---GFCGLAAY 406


>Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical
           protein F36H1.3 protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 265 LQAEKAQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLK----PPKMQ 423
           L   +A L L    KY   PK+ D IE  +R    V D V  +PP L+    PPK++
Sbjct: 424 LMLVEAILDLGVAFKYIEDPKSLDAIETYKR---NVADYVEAHPPPLEMFKAPPKVE 477


>U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm receptor
           protein 135 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -2

Query: 388 VALYHIPATFVFRVFQYGHNFLAEENILNLQLELAELFQLVINRNS 251
           + L  IP+ FVF V+ +G  F    N L  Q+ L E  Q   N N+
Sbjct: 135 LCLLFIPSIFVFAVWHFGF-FHGMPNTLEKQIFLREELQTCFNVNT 179


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 310  YFPPPKNYDHIEIPERQRLRVYDKVP-QYPPNLKPPKMQKRL 432
            YFP PK  + +++ +R+  R+      +Y P +K PK+QKR+
Sbjct: 2215 YFPNPK-LEKVKLSQRKPSRISSASDSEYCPIVKFPKVQKRV 2255


>Z79759-3|CAB02136.1|  225|Caenorhabditis elegans Hypothetical
           protein ZK858.3 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = -2

Query: 628 LSWLWVAMEDLFSRWQTYASCLISWQQLSEPFQNVRVSFFH 506
           ++WL    + + + W +YA+C  S+Q  +E  ++   +FF+
Sbjct: 165 INWLIKPFKPVVNGWSSYANCAASFQSPTE-VESASYTFFY 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,618,580
Number of Sequences: 27780
Number of extensions: 402014
Number of successful extensions: 1055
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)