Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_A24
         (910 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    26   0.47 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   4.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   4.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.8  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   7.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +1

Query: 694 SKIFKYRRGNCLEGCWFKCWDFCYSLYSPQNFRSIPDSHNF 816
           SK+       C E C  K  +FC   +S   F  I  S+ F
Sbjct: 231 SKVKSILNKKCCEKCGLKKIEFCRPTFSAARFYGIDFSNTF 271


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 130 RGVHCT*CVPIFNYENKQKC 189
           RG+H    VP + Y+N+ +C
Sbjct: 573 RGIHAEALVPRWCYQNEGEC 592


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +1

Query: 784 NFRSIPDSHNFDCNTFHRSTLKKYWNFKTWYKCWW 888
           N   I   +NF+ NT H    K Y  F    K  W
Sbjct: 416 NIFLITPFYNFNENTIHSKLCKLYATFLIALKLVW 450


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 78  CLIIYTFCYFDIGLVVVQGCQIIGR 4
           CL+IYT     + +V    C I  +
Sbjct: 282 CLVIYTLVSVSLVMVTCDACTIASK 306


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 78  CLIIYTFCYFDIGLVVVQGCQIIGR 4
           CL+IYT     + +V    C I  +
Sbjct: 282 CLVIYTLVSVSLVMVTCDACTIASK 306


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +1

Query: 790 RSIPDSHNFDC---NTFHRSTLKKYWNFKTWYKCWWW 891
           + IPD+   +C   N  H+  ++K  ++    K  WW
Sbjct: 60  KDIPDALKNECAKCNDKHKEGIRKVIHYLVKQKPEWW 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,548
Number of Sequences: 336
Number of extensions: 5347
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)