Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A24
(910 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-88|AAM68369.1| 321|Drosophila melanogaster CG17508-PA ... 100 5e-21
AY071311-1|AAL48933.1| 320|Drosophila melanogaster RE33778p pro... 97 4e-20
BT022302-1|AAY54718.1| 200|Drosophila melanogaster IP04635p pro... 71 3e-12
BT022273-1|AAY54689.1| 200|Drosophila melanogaster IP04735p pro... 71 3e-12
AE014134-559|AAF51144.2| 200|Drosophila melanogaster CG15403-PA... 71 3e-12
AY060388-1|AAL25427.1| 241|Drosophila melanogaster LD29159p pro... 55 1e-07
AE014298-3179|AAF50951.1| 241|Drosophila melanogaster CG14613-P... 55 1e-07
AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p pro... 33 0.71
AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH... 33 0.71
AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG... 33 0.71
AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF... 33 0.71
AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE... 33 0.71
AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD... 33 0.71
AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC... 33 0.71
AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB... 33 0.71
AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA... 33 0.71
AY069790-1|AAL39935.1| 1047|Drosophila melanogaster SD03282p pro... 30 5.0
AL009188-3|CAA15674.2| 1060|Drosophila melanogaster EG:165H7.3 p... 30 5.0
AE014298-33|AAF45504.2| 1047|Drosophila melanogaster CG3923-PA p... 30 5.0
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 29 6.7
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 29 6.7
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 29 6.7
>AE013599-88|AAM68369.1| 321|Drosophila melanogaster CG17508-PA
protein.
Length = 321
Score = 99.5 bits (237), Expect = 5e-21
Identities = 58/145 (40%), Positives = 82/145 (56%), Gaps = 15/145 (10%)
Frame = +3
Query: 264 QNVHVSPLLKSQSVALKLPTNVVDINASEVGRFSPNRERDISGPVINSHYKKQHDMSKID 443
Q +H+S + + +P + +++++E RFSP R RDIS VIN+ Q +S ID
Sbjct: 30 QQLHLSVAMGNYVNEASIPLPI-NVDSAETTRFSPQRSRDISSTVINA----QAPISSID 84
Query: 444 IT-------------IQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTG--NHTHLNMPGSQ 578
IT I DP+V YDC G +SL+S+MQSNVP+PF G +HLNMPG Q
Sbjct: 85 ITTDNSFHAVLSDPNICQDPHVQSYDCFGLISLNSAMQSNVPTPFGGLNKFSHLNMPGGQ 144
Query: 579 WGQGHKYLSDHLHSAHYLSLRNEYR 653
W Q K+ + ++ +HY LR R
Sbjct: 145 WSQEFKFTAQNMQCSHYSGLRESLR 169
Score = 60.1 bits (139), Expect = 4e-09
Identities = 26/61 (42%), Positives = 44/61 (72%)
Frame = +2
Query: 671 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLR 850
+G++LV L+ + I +++ + + TFV+AY VHK+FAP RI+ITL + PF+VR++R
Sbjct: 251 SGINLVPALECIGIASPAIVEKVATGS-TFVVAYAVHKVFAPARISITLGSVPFVVRYIR 309
Query: 851 N 853
+
Sbjct: 310 S 310
>AY071311-1|AAL48933.1| 320|Drosophila melanogaster RE33778p
protein.
Length = 320
Score = 96.7 bits (230), Expect = 4e-20
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 10/140 (7%)
Frame = +3
Query: 264 QNVHVSPLLKSQSVALKLPTNVVDINASEVGRFSPNRERDISGPVIN------SHYKKQH 425
Q +H+S + + +P + +++++E RFSP R RDIS VIN S+ +
Sbjct: 30 QQLHLSVAMGNYVNEASIPLPI-NVDSAETTRFSPQRSRDISSTVINAQAPISSNITTDN 88
Query: 426 DMSKI--DITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTG--NHTHLNMPGSQWGQGH 593
+ D I DP+V YDC G +SL+S+MQSNVP+PF G +HL+MPG QW Q
Sbjct: 89 SFHAVLSDPNICQDPHVQSYDCFGLISLNSAMQSNVPTPFGGLNKFSHLDMPGGQWSQEF 148
Query: 594 KYLSDHLHSAHYLSLRNEYR 653
K+ + ++ +HY LR R
Sbjct: 149 KFTAQNMQCSHYSGLRESLR 168
Score = 60.1 bits (139), Expect = 4e-09
Identities = 26/61 (42%), Positives = 44/61 (72%)
Frame = +2
Query: 671 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLR 850
+G++LV L+ + I +++ + + TFV+AY VHK+FAP RI+ITL + PF+VR++R
Sbjct: 250 SGINLVPALECIGIASPAIVEKVATGS-TFVVAYAVHKVFAPARISITLGSVPFVVRYIR 308
Query: 851 N 853
+
Sbjct: 309 S 309
>BT022302-1|AAY54718.1| 200|Drosophila melanogaster IP04635p
protein.
Length = 200
Score = 70.5 bits (165), Expect = 3e-12
Identities = 33/66 (50%), Positives = 48/66 (72%)
Frame = +2
Query: 671 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLR 850
+G++LV +L+Y + V + + + TFV+A+ VHKIFAP RI+ITL TPFIVR+LR
Sbjct: 132 SGINLVPVLEYFGMGSSAVAEKVAAGS-TFVVAFAVHKIFAPARISITLGTTPFIVRYLR 190
Query: 851 NIGILK 868
+ G+LK
Sbjct: 191 SKGLLK 196
>BT022273-1|AAY54689.1| 200|Drosophila melanogaster IP04735p
protein.
Length = 200
Score = 70.5 bits (165), Expect = 3e-12
Identities = 33/66 (50%), Positives = 48/66 (72%)
Frame = +2
Query: 671 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLR 850
+G++LV +L+Y + V + + + TFV+A+ VHKIFAP RI+ITL TPFIVR+LR
Sbjct: 132 SGINLVPVLEYFGMGSSAVAEKVAAGS-TFVVAFAVHKIFAPARISITLGTTPFIVRYLR 190
Query: 851 NIGILK 868
+ G+LK
Sbjct: 191 SKGLLK 196
>AE014134-559|AAF51144.2| 200|Drosophila melanogaster CG15403-PA
protein.
Length = 200
Score = 70.5 bits (165), Expect = 3e-12
Identities = 33/66 (50%), Positives = 48/66 (72%)
Frame = +2
Query: 671 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLR 850
+G++LV +L+Y + V + + + TFV+A+ VHKIFAP RI+ITL TPFIVR+LR
Sbjct: 132 SGINLVPVLEYFGMGSSAVAEKVAAGS-TFVVAFAVHKIFAPARISITLGTTPFIVRYLR 190
Query: 851 NIGILK 868
+ G+LK
Sbjct: 191 SKGLLK 196
>AY060388-1|AAL25427.1| 241|Drosophila melanogaster LD29159p
protein.
Length = 241
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 671 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLR 850
+GVD+ A+L+Y+++ E + K GS+ G + IAY +K+ P R A+TL T +++L
Sbjct: 143 SGVDVPALLQYIHLSENIIEKVQGSDMGHYAIAYLCYKVATPLRYALTLGCTTVSIKYLV 202
Query: 851 NIGILK 868
G +K
Sbjct: 203 QHGYIK 208
>AE014298-3179|AAF50951.1| 241|Drosophila melanogaster CG14613-PA
protein.
Length = 241
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 671 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLR 850
+GVD+ A+L+Y+++ E + K GS+ G + IAY +K+ P R A+TL T +++L
Sbjct: 143 SGVDVPALLQYIHLSENIIEKVQGSDMGHYAIAYLCYKVATPLRYALTLGCTTVSIKYLV 202
Query: 851 NIGILK 868
G +K
Sbjct: 203 QHGYIK 208
>AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH,
isoform H protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG,
isoform G protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF,
isoform F protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE,
isoform E protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD,
isoform D protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC,
isoform C protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB,
isoform B protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA,
isoform A protein.
Length = 1384
Score = 32.7 bits (71), Expect = 0.71
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 234 QIAIGSSYIKQNVHVSPLLKSQSVAL-KLPTNVVDINASEVGRFSPNRERDISGPVINSH 410
Q+AI S +I + PL ++ L +L +N+ + A++ ++ V S
Sbjct: 727 QLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISK 786
Query: 411 YKKQHDMSKIDITIQVDPYVNKYDCRGAVSLSSSMQSNVPSPFTGNHTHLNMPGSQWGQG 590
YK+Q + I Q YV + + + Q +PS HL+ G+ + +G
Sbjct: 787 YKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPS------VHLSNSGNDYLRG 840
Query: 591 HKYLSD 608
H +++
Sbjct: 841 HDAINN 846
>AY069790-1|AAL39935.1| 1047|Drosophila melanogaster SD03282p
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 5.0
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 582 GQGHKYLSDHLHSAHYLSLRNEYREKIIN 668
G G+ SD+LH AH++++ N Y + +++
Sbjct: 899 GSGNFNCSDNLHPAHFMAILNAYGQMLVS 927
>AL009188-3|CAA15674.2| 1060|Drosophila melanogaster EG:165H7.3
protein.
Length = 1060
Score = 29.9 bits (64), Expect = 5.0
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 582 GQGHKYLSDHLHSAHYLSLRNEYREKIIN 668
G G+ SD+LH AH++++ N Y + +++
Sbjct: 912 GSGNFNCSDNLHPAHFMAILNAYGQMLVS 940
>AE014298-33|AAF45504.2| 1047|Drosophila melanogaster CG3923-PA
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 5.0
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 582 GQGHKYLSDHLHSAHYLSLRNEYREKIIN 668
G G+ SD+LH AH++++ N Y + +++
Sbjct: 899 GSGNFNCSDNLHPAHFMAILNAYGQMLVS 927
>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
protein.
Length = 1413
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 486 RGAVSLSS-SMQSNVPSPFTGNHTHLNMPGSQWGQGHKYLSDHLHSAHYLSLRNEYREK 659
+GA S S P+ T HTH + H + H HS H S N YR++
Sbjct: 86 QGAPSTGSVGAAQGAPATATATHTHAHSHSHSHAHSHTHPQPHAHSPHSPSPPN-YRDE 143
>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
isoform A protein.
Length = 1413
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 486 RGAVSLSS-SMQSNVPSPFTGNHTHLNMPGSQWGQGHKYLSDHLHSAHYLSLRNEYREK 659
+GA S S P+ T HTH + H + H HS H S N YR++
Sbjct: 86 QGAPSTGSVGAAQGAPATATATHTHAHSHSHSHAHSHTHPQPHAHSPHSPSPPN-YRDE 143
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 486 RGAVSLSS-SMQSNVPSPFTGNHTHLNMPGSQWGQGHKYLSDHLHSAHYLSLRNEYREK 659
+GA S S P+ T HTH + H + H HS H S N YR++
Sbjct: 373 QGAPSTGSVGAAQGAPATATATHTHAHSHSHSHAHSHTHPQPHAHSPHSPSPPN-YRDE 430
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,007,648
Number of Sequences: 53049
Number of extensions: 887974
Number of successful extensions: 2462
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2457
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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