Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A21
(709 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and coile... 246 6e-65
AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune... 246 6e-65
AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein. 246 6e-65
AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and coile... 246 6e-65
AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein. 246 6e-65
AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein. 246 6e-65
AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein. 196 8e-50
AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein. 182 1e-45
EF657578-13|ABR97485.1| 378|Homo sapiens cytochrome b protein. 31 5.3
AY289052-13|AAP47905.1| 378|Homo sapiens cytochrome b protein. 30 7.1
>BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 246 bits (602), Expect = 6e-65
Identities = 119/178 (66%), Positives = 137/178 (76%)
Frame = +1
Query: 91 MWSXSLLIVFISICTAFLGXGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 270
M++ +LLIVFIS+CTA L G+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 271 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 450
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 451 WIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 624
+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G P
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPP 181
>AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune
protein protein.
Length = 188
Score = 246 bits (602), Expect = 6e-65
Identities = 119/178 (66%), Positives = 137/178 (76%)
Frame = +1
Query: 91 MWSXSLLIVFISICTAFLGXGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 270
M++ +LLIVFIS+CTA L G+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 271 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 450
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 451 WIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 624
+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G P
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPP 181
>AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein.
Length = 188
Score = 246 bits (602), Expect = 6e-65
Identities = 119/178 (66%), Positives = 137/178 (76%)
Frame = +1
Query: 91 MWSXSLLIVFISICTAFLGXGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 270
M++ +LLIVFIS+CTA L G+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 271 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 450
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 451 WIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 624
+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G P
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPP 181
>AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 246 bits (602), Expect = 6e-65
Identities = 119/178 (66%), Positives = 137/178 (76%)
Frame = +1
Query: 91 MWSXSLLIVFISICTAFLGXGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 270
M++ +LLIVFIS+CTA L G+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 271 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 450
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 451 WIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 624
+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G P
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPP 181
>AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein.
Length = 230
Score = 246 bits (602), Expect = 6e-65
Identities = 119/178 (66%), Positives = 137/178 (76%)
Frame = +1
Query: 91 MWSXSLLIVFISICTAFLGXGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 270
M++ +LLIVFIS+CTA L G+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 46 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 105
Query: 271 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 450
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 106 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 165
Query: 451 WIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 624
+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G P
Sbjct: 166 YIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPP 223
>AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein.
Length = 188
Score = 246 bits (602), Expect = 6e-65
Identities = 119/178 (66%), Positives = 137/178 (76%)
Frame = +1
Query: 91 MWSXSLLIVFISICTAFLGXGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 270
M++ +LLIVFIS+CTA L G+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 271 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 450
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 451 WIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 624
+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G P
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPP 181
>AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein.
Length = 149
Score = 196 bits (477), Expect = 8e-50
Identities = 95/146 (65%), Positives = 111/146 (76%)
Frame = +1
Query: 91 MWSXSLLIVFISICTAFLGXGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 270
M++ +LLIVFIS+CTA L G+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 271 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 450
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 451 WIQGLSHRNLPGDDYTDCSFIFLYIL 528
+IQGL HRNL GDD TDCSFIFLYIL
Sbjct: 124 YIQGLPHRNLLGDDTTDCSFIFLYIL 149
>AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein.
Length = 130
Score = 182 bits (442), Expect = 1e-45
Identities = 94/146 (64%), Positives = 110/146 (75%)
Frame = +1
Query: 91 MWSXSLLIVFISICTAFLGXGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 270
M++ +LLIVFIS+CTA L G+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 271 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 450
LS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 -------------------LSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 104
Query: 451 WIQGLSHRNLPGDDYTDCSFIFLYIL 528
+IQGL HRNL GDD TDCSFIFLYIL
Sbjct: 105 YIQGLPHRNLLGDDTTDCSFIFLYIL 130
>EF657578-13|ABR97485.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 30.7 bits (66), Expect = 5.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 61 LFH*SXRFCKMWSXSLLIVFISICTAFLGXGLTW 162
L++ S + + W+ ++++F ++ TAF+G L W
Sbjct: 102 LYYGSFLYSETWNIGIILLFATMATAFMGYVLPW 135
>AY289052-13|AAP47905.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 30.3 bits (65), Expect = 7.1
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 61 LFH*SXRFCKMWSXSLLIVFISICTAFLGXGLTW 162
L++ S + K W+ ++++ ++ TAF+G L W
Sbjct: 102 LYYGSFLYSKTWNTGIILLLATMATAFMGYVLPW 135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,717,113
Number of Sequences: 237096
Number of extensions: 1432549
Number of successful extensions: 6939
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6932
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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