Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A18
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 37 0.022
Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical pr... 35 0.067
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.83
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 31 1.4
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 29 3.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 29 5.8
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 5.8
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 29 5.8
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 29 5.8
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 7.7
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 28 7.7
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 28 7.7
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 7.7
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 28 7.7
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 147 YPYNPYYGNVDSLSYGSGDSNR--GGLVMSRYYNPYYN-PRAVGGGMAAFMYRQPEA 308
Y N YYGN YG+G N+ GG + YYN YYN GG + Y Q ++
Sbjct: 138 YYGNGYYGNGYGNGYGNGYYNQYNGGYGGNGYYNQYYNGNNYYGGNRGYYNYNQGQS 194
>Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical
protein F35B12.3 protein.
Length = 248
Score = 35.1 bits (77), Expect = 0.067
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +3
Query: 114 VMMSCALLVQAYPYNPYYGNVDSLSYGSGDSNRGGLVMSRYYNPYY-NPRAVGG--GMAA 284
+++SC +L AYPY+ YGN D Y Y Y NP GG G
Sbjct: 7 LVVSCGILAAAYPYSQQYGNYDQ-QYSQQSQYYPSSGQQGYRGGYQSNPGMQGGYQGNGQ 65
Query: 285 FMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSP 443
Y+ + Q GQ R Q Y Q ++ YP++ ++ ++SP
Sbjct: 66 DSYQDFQGYQGYQRGQG--GQRGYQ-----GYQSNQRSQGSYPERYDSSMYSP 111
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.9 bits (69), Expect = 0.63
Identities = 27/115 (23%), Positives = 36/115 (31%), Gaps = 2/115 (1%)
Frame = +1
Query: 154 TIPTMETWTPFPTARAIVTEEAWS*AVTTILT--TTPELWAVVWPRSCTASPKPHRRLQR 327
T+PT T TP T T + TT T TT P + T +
Sbjct: 215 TVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTT 274
Query: 328 ARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKRPNWLTPLKRSNCT 492
T P T + K+ + T +T S+ TP S CT
Sbjct: 275 TPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKTPFDTSKCT 329
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 246 YYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPE 425
Y NP+A G + +Q + P Y P R++Q +Y P+Q+ + Y QQ +
Sbjct: 27 YQNPQAGYG----YNNQQQQQQGRPQQYAGYPPQRQQQQYNMNAYAPRQQQQQQYQQQQQ 82
Query: 426 N 428
N
Sbjct: 83 N 83
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 676 PHPRSSQCSSDG-EVGPQVVPEARPQLPTHTAQVEEASPQATP 801
P P ++ SS G G + PEA P P+ EA+P+A P
Sbjct: 456 PAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAP 498
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = -1
Query: 818 GSTVXGGVACGDASSTCAVCVGNCGRASGTTC-GPTSPSEEHWEERGCGHSG 666
G GG CG C G CG G C G +S GCG G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 703 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 801
S G G + PEA P P+ EA+P+A P
Sbjct: 484 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 516
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 703 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 801
S G G + PEA P P+ EA+P+A P
Sbjct: 502 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 534
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 703 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 801
S G G + PEA P P+ EA+P+A P
Sbjct: 520 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 552
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 703 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 801
S G G + PEA P P+ EA+P+A P
Sbjct: 538 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 570
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 676 PHPRSSQCSSDG-EVGPQVVPEARPQLPTHTAQVEEASPQATP 801
P P ++ SS G G + PEA P P+ EA+P+A P
Sbjct: 456 PAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAP 498
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = -1
Query: 818 GSTVXGGVACGDASSTCAVCVGNCGRASGTTC-GPTSPSEEHWEERGCGHSG 666
G GG CG C G CG G C G +S GCG G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 703 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 801
S G G + PEA P P+ EA+P+A P
Sbjct: 484 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 516
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 703 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 801
S G G + PEA P P+ EA+P+A P
Sbjct: 502 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 534
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 703 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 801
S G G + PEA P P+ EA+P+A P
Sbjct: 520 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 552
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 703 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 801
S G G + PEA P P+ EA+P+A P
Sbjct: 538 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 570
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 658 SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPP 804
+HHP P P Q + E P +P+ + P TA A+ + T P
Sbjct: 215 AHHP--PAPPIRQAAHAAESSPPPIPQRKSSAPAPTAAAPPATKEPTDP 261
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 111 FVMMSCALLVQAYPYNPYYGNVDSLSYGS 197
F M A YPY+PYY L +GS
Sbjct: 311 FAMNQKASFANQYPYHPYYHQYSQLDHGS 339
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 378 YVPQQENEVYYPQQPENPIFSPTQATELADPTEKIE 485
YVPQ+ P PE +P+Q + +PT IE
Sbjct: 1812 YVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIE 1847
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 818 GSTVXGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEH 696
G GG +CG ++ C G G S + C P + + H
Sbjct: 2136 GGCSGGGNSCGGGCNSGGSCGGGGGGCSSSCCQPQTSATSH 2176
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/104 (21%), Positives = 43/104 (41%)
Frame = +1
Query: 145 RIPTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVVWPRSCTASPKPHRRLQ 324
R +PT W T + T+ + + ++T+ TTT +L + T P +
Sbjct: 217 RSSKLPTSSVWKATTTPSDLPTKPSRTRSLTSTSTTTAKLPTT----TSTTFAAPQASTE 272
Query: 325 RARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKRP 456
+ T + A P +P ++ +IT ++ S++ K P
Sbjct: 273 PSEATEALATATPADLPTKPSGREITTIT-GTRKLSSTSTTKLP 315
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 YYNPYYN--PRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVY 407
YY PYY P A G + +Q +A A ++ Q A + QQ+ + Y
Sbjct: 25 YYTPYYYYYPTAAVAGTTG-VAQQTQAGGASQQAYAQQQPQQNQQYAQGT---QQQQQQY 80
Query: 408 YPQQPE 425
YPQQ +
Sbjct: 81 YPQQTQ 86
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +3
Query: 240 NPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYY--P 413
NP NP + G+ P Q P V P R + + V Q + V P
Sbjct: 63 NPVQNPNKLSTGLPPMTMMLPPTVQEPLPTPVKTPPLPRPP-GNLNPVQQPQIPVQRTPP 121
Query: 414 QQPENPIFSPTQATELA 464
Q P P+ P Q T++A
Sbjct: 122 QCPPPPVPHPPQITQMA 138
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 154 TIPTMETWTPFPTA-----RAIVTEEAWS*AVTTILTTTPEL--WAVVWPRSCTASPKPH 312
T T T TP PT TE + T TTTP++ WA +W + TA PK +
Sbjct: 216 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 273
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 154 TIPTMETWTPFPTA-----RAIVTEEAWS*AVTTILTTTPEL--WAVVWPRSCTASPKPH 312
T T T TP PT TE + T TTTP++ WA +W + TA PK +
Sbjct: 212 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 269
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 154 TIPTMETWTPFPTA-----RAIVTEEAWS*AVTTILTTTPEL--WAVVWPRSCTASPKPH 312
T T T TP PT TE + T TTTP++ WA +W + TA PK +
Sbjct: 155 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 212
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
T28B8.3a protein.
Length = 1838
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 202 IVTEEAWS*AVTTILTTTPELWAVVW 279
I EEAWS A+ TIL T +L V W
Sbjct: 1431 IEAEEAWSIAMETILDPTSDLRRVWW 1456
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -1
Query: 818 GSTVXGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEHWEERGCGHSG 666
G GG CG C G CG G G P GCG G
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 676 PHPRSSQCSSDGEVGPQVVPEARPQLP-THTAQVEEASPQATPPXTVDP 819
P P +S SS G P P ARP+ P V+ A+P PP P
Sbjct: 673 PTPEAS--SSTGTSAPARPPPARPEAPKKDETAVDAAAPPRPPPAARPP 719
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Frame = +1
Query: 655 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPXTVD 816
T+H P P S CS V P + P + + SP T PP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 817 PDRMKNCKP 843
P K KP
Sbjct: 276 PPTKKGMKP 284
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Frame = +1
Query: 655 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPXTVD 816
T+H P P S CS V P + P + + SP T PP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 817 PDRMKNCKP 843
P K KP
Sbjct: 276 PPTKKGMKP 284
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 384 PQQENEVYYPQQPENPIFSPTQATELA 464
PQQ+ Y PQQP +PI A +A
Sbjct: 6 PQQQQPGYQPQQPSHPIVGAGAAPTMA 32
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Frame = +1
Query: 655 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPXTVD 816
T+H P P S CS V P + P + + SP T PP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 817 PDRMKNCKP 843
P K KP
Sbjct: 276 PPTKKGMKP 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,536,689
Number of Sequences: 27780
Number of extensions: 396499
Number of successful extensions: 1531
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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