Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A14
(922 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ... 29 0.70
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 29 0.70
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.2
SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyc... 28 1.6
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 28 1.6
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 27 2.8
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 27 2.8
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 27 2.8
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 27 2.8
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 27 2.8
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 27 2.8
SPCC132.02 |hst2||Sir2 family histone deacetylase Hst2|Schizosac... 27 2.8
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 27 2.8
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 27 2.8
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 27 2.8
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 27 2.8
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 27 2.8
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 27 3.7
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 3.7
SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces pom... 26 6.5
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 8.6
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 26 8.6
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 26 8.6
SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase |... 26 8.6
SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box as... 26 8.6
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 26 8.6
>SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 29.5 bits (63), Expect = 0.70
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +1
Query: 265 LTEVITNEDNFNYPSFALEF--KKYLDDNSPYPKPYEFISSSVKSDENNMVIKHLMSDLK 438
L I N DN + + F K++L SPY +PY S + + HL+
Sbjct: 11 LAAFIVNADNVQFEDYESNFFFKEHLGTLSPYHEPYFDGLDSAFPETCEIQQVHLLQRHG 70
Query: 439 LAEPTFMFNPVDVENMQY 492
PT DV + QY
Sbjct: 71 SRNPTGDVTATDVYSSQY 88
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 29.5 bits (63), Expect = 0.70
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 166 IWCNFRIEKDNRVSSVLKDLSKLVKCYNTAIDKLTEVITNE--DNFNYPSFALEFKKYLD 339
I C+ R E+ R ++ D K + N I + NE D ++ +
Sbjct: 361 ISCHQREEEITRCATQAYDAVKAAEKRNETIAEAARAKENEAKDLYSKAESITQDLNAKR 420
Query: 340 DNSPYPKPYEFISSSVKSDENNMVIKHLMSDLKLAEPTFMFNPVDV 477
+ P P ++ S+ ++ E + + ++DL+ AEP+ N V+V
Sbjct: 421 SHPPQPANLDYSSAIQRAQERLTLEESKLTDLRTAEPSQYVNDVEV 466
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.2
Identities = 29/110 (26%), Positives = 45/110 (40%)
Frame = +1
Query: 583 TDLNMSCENFKKYFMNYNLIDMLNVIVYEKINSLKNFGNRYAIYKPSLLEEFRTLNWLLE 762
TD+ EN KY Y+ ID + ++ +NS F Y+I K E F +
Sbjct: 1194 TDMLTKLENTVKYLCEYDSIDKVRNSFFKNLNS---FYEMYSIAKAENEERFEK----EK 1246
Query: 763 NKLLFEIKHKAINYEDEDEIXCFILXKRRKLHIDSLENLVLDDKDSTMVE 912
+++ E + K I + I K R+L DS + KD +E
Sbjct: 1247 RRIMSEDRDKLIRGRQKTSIVAKYRNK-RELPEDSDDKQDTASKDKNSLE 1295
>SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 898
Score = 28.3 bits (60), Expect = 1.6
Identities = 27/110 (24%), Positives = 47/110 (42%)
Frame = +1
Query: 160 NEIWCNFRIEKDNRVSSVLKDLSKLVKCYNTAIDKLTEVITNEDNFNYPSFALEFKKYLD 339
+ IW F D+R S++L+ K N A+ L E F Y S AL L
Sbjct: 495 HSIWTLF---VDSRTSNLLRASQVDNKVENEALMGLFETFVKIKKFEYESNAL-----LV 546
Query: 340 DNSPYPKPYEFISSSVKSDENNMVIKHLMSDLKLAEPTFMFNPVDVENMQ 489
+ Y Y + ++K +N++I + D K E +P+ + +++
Sbjct: 547 SGTGY---YNVVLETLKKSSSNILIMPYLKDYKTIENESSSSPLSLSSIR 593
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 3 SAYKLFHVNSNNLPVHVKFMYKKCIKMAC*ALPTDAAFRDRFVKICLPKISW 158
S YKL + N NNL H + + K TD A R + P +SW
Sbjct: 858 SHYKLVYTNKNNLCAHEFILDAREFKATAGVDATDIAKRLQDYSFHAPTLSW 909
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPCC132.02 |hst2||Sir2 family histone deacetylase
Hst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 493 QIRTYCKQIGWLENSDEIVCKVITVLPNELTDLNM 597
Q+R CK +GW + ++++ + L E++ L++
Sbjct: 258 QVRALCKLLGWSDELEKLIDTSVETLTEEISLLSV 292
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 268 TEVITNEDNFNYPSFALEFKKY-LDDNSPYPKPYEFISSSVKSDENN 405
T ++++ PS A++ + +N PYPKP +++ ++ENN
Sbjct: 197 TSAVSHQKPHEAPSTAVKAPTATVAENEPYPKPQSVPTTTSPNNENN 243
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 FRIEKDNRVSSVLKDLSKLVKCY-----NTAIDKLTEVITNEDNFNYPSFALEFKKYLDD 342
+R + D + + + KL++C NT +D ++ V + +N + + + + +
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1136
Query: 343 NSPYPKPYEFISSSVKSDENN 405
SP P E S S K+DEN+
Sbjct: 1137 YSPALSPLELPSFSDKTDENS 1157
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 319 EFKKYLDDNSPYPKPYEFISSSVKSDEN 402
+ K+ DD +PYP PY+ ++S S N
Sbjct: 387 DLSKHQDDIAPYPNPYQNYTTSNTSVVN 414
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 319 EFKKYLDDNSPYPKPYEFISSSVKSDEN 402
+ K+ DD +PYP PY+ ++S S N
Sbjct: 387 DLSKHQDDIAPYPNPYQNYTTSNTSVVN 414
>SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 453
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 247 NTAIDKLTEVITNEDNFNYPSF--ALEFKKYLDDNSPYPKPY 366
N + L V N + +F +FK++L SPY KPY
Sbjct: 5 NLFLGFLAVVCANAQFAEFTAFDGKFDFKEHLTSRSPYHKPY 46
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 8.6
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Frame = +1
Query: 154 LGNEIWCNFRIEKDNRVSS----VLKDLSKLVKCYNTAIDKLTEVITNEDNFNYPSFA-- 315
+ E W ++ I K N V+S ++ + V+ +NT KL ++I D YPS +
Sbjct: 1180 VNKECWFDW-IGKPNSVTSCHGYLIAFNDEFVEIWNTRTRKLNQIIQGNDIKYYPSNSDW 1238
Query: 316 LEFKKYLDDNSPYPKPYE--FISSSVKSDENNMVIK 417
L KY+ +P+ ++ I + K+ N+ +I+
Sbjct: 1239 LANGKYIMFGMVHPQYHDRHLILALNKAKTNSFIIE 1274
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 721 SLLEEFRTLNWLLENKLLFEIKHKAINYEDEDEIXC 828
SLLE++R +++LLEN L K + ED D C
Sbjct: 723 SLLEDWRLVSFLLENSALLLEKFEE---EDVDSTNC 755
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 25.8 bits (54), Expect = 8.6
Identities = 24/109 (22%), Positives = 53/109 (48%)
Frame = +1
Query: 496 IRTYCKQIGWLENSDEIVCKVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIVYEKI 675
+R Y K + E++ I+ +IT L +++++ +M ++ YNL+D + IV+E++
Sbjct: 694 LRFYRKSMA-TESNWTILMFMITHLADQISNRSMFIGALEEI---YNLLDFMCDIVFERV 749
Query: 676 NSLKNFGNRYAIYKPSLLEEFRTLNWLLENKLLFEIKHKAINYEDEDEI 822
+ PS + + + +L+N + + H + EDE+
Sbjct: 750 SISAEI--------PSNIRKANIMIPILQNVQMLFVYHDQFSRAQEDEL 790
>SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 8.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 328 KYLDDNSPYPKPYEF 372
KY+++ P P+PYE+
Sbjct: 450 KYMEEEKPVPEPYEY 464
>SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box
associated subunit Sfc1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 298 NYPSFALEFKKYLDDNSPYPKPYEFISSSVKSDENNMVIKHLMSDLKL 441
+Y FAL + YL + P+ Y + D N + L LKL
Sbjct: 250 HYLKFALPYLSYLWTSGPFRDTYTRFGYDPRKDSNAAAYQALFFKLKL 297
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 146 WQTDFNKSISKGGVGG 99
W+T +N SI KG VGG
Sbjct: 42 WKTLYNASIEKGTVGG 57
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,661,304
Number of Sequences: 5004
Number of extensions: 79074
Number of successful extensions: 249
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -