Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A14
(922 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060390-1|AAL25429.1| 304|Drosophila melanogaster LD29354p pro... 33 0.55
AE014297-710|AAN14308.1| 304|Drosophila melanogaster CG9636-PC,... 33 0.55
AE014297-709|AAF54201.1| 453|Drosophila melanogaster CG9636-PA,... 33 0.55
AE014297-708|AAF54200.1| 462|Drosophila melanogaster CG9636-PB,... 33 0.55
BT001299-1|AAN71054.1| 905|Drosophila melanogaster AT12234p pro... 31 2.2
AE014297-4542|AAN14217.1| 905|Drosophila melanogaster CG31029-P... 31 2.2
AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p pro... 30 5.1
AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein... 30 5.1
AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein... 30 5.1
AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA... 30 5.1
AE014296-1774|AAF50188.1| 117|Drosophila melanogaster CG6709-PA... 29 9.0
>AY060390-1|AAL25429.1| 304|Drosophila melanogaster LD29354p
protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.55
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +1
Query: 400 NNMVIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQIGWLENSDEIVCKVITVLPNE 579
+ +V+ +++S L+ A F DVE + Y ++ ++ I+C I L NE
Sbjct: 32 DEIVLSYIISILEEASQDPCF---DVEGFVEMMGAYFEEFSTIDQG--IICDWIYKLANE 86
Query: 580 LTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINS 681
LTD+ + EN ++ N + + ++I K+ +
Sbjct: 87 LTDMEKTQENPDAVNLSLNSLSLSSIIPESKLRA 120
>AE014297-710|AAN14308.1| 304|Drosophila melanogaster CG9636-PC,
isoform C protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.55
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +1
Query: 400 NNMVIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQIGWLENSDEIVCKVITVLPNE 579
+ +V+ +++S L+ A F DVE + Y ++ ++ I+C I L NE
Sbjct: 32 DEIVLSYIISILEEASQDPCF---DVEGFVEMMGAYFEEFSTIDQG--IICDWIYKLANE 86
Query: 580 LTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINS 681
LTD+ + EN ++ N + + ++I K+ +
Sbjct: 87 LTDMEKTQENPDAVNLSLNSLSLSSIIPESKLRA 120
>AE014297-709|AAF54201.1| 453|Drosophila melanogaster CG9636-PA,
isoform A protein.
Length = 453
Score = 33.1 bits (72), Expect = 0.55
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +1
Query: 400 NNMVIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQIGWLENSDEIVCKVITVLPNE 579
+ +V+ +++S L+ A F DVE + Y ++ ++ I+C I L NE
Sbjct: 23 DEIVLSYIISILEEASQDPCF---DVEGFVEMMGAYFEEFSTIDQG--IICDWIYKLANE 77
Query: 580 LTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINS 681
LTD+ + EN ++ N + + ++I K+ +
Sbjct: 78 LTDMEKTQENPDAVNLSLNSLSLSSIIPESKLRA 111
>AE014297-708|AAF54200.1| 462|Drosophila melanogaster CG9636-PB,
isoform B protein.
Length = 462
Score = 33.1 bits (72), Expect = 0.55
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +1
Query: 400 NNMVIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQIGWLENSDEIVCKVITVLPNE 579
+ +V+ +++S L+ A F DVE + Y ++ ++ I+C I L NE
Sbjct: 32 DEIVLSYIISILEEASQDPCF---DVEGFVEMMGAYFEEFSTIDQG--IICDWIYKLANE 86
Query: 580 LTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINS 681
LTD+ + EN ++ N + + ++I K+ +
Sbjct: 87 LTDMEKTQENPDAVNLSLNSLSLSSIIPESKLRA 120
>BT001299-1|AAN71054.1| 905|Drosophila melanogaster AT12234p
protein.
Length = 905
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 454 FMFNPVDVENMQYQIRTYCKQIGWLENSDEIV 549
F + ++ + +QY++ C+Q GW NSD V
Sbjct: 742 FCRSHIEKKRIQYEVENECRQRGWPNNSDTFV 773
>AE014297-4542|AAN14217.1| 905|Drosophila melanogaster CG31029-PA
protein.
Length = 905
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 454 FMFNPVDVENMQYQIRTYCKQIGWLENSDEIV 549
F + ++ + +QY++ C+Q GW NSD V
Sbjct: 742 FCRSHIEKKRIQYEVENECRQRGWPNNSDTFV 773
>AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p
protein.
Length = 1422
Score = 29.9 bits (64), Expect = 5.1
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Frame = +1
Query: 43 QXMLNSCTKNALKWL--AKHYPPTPP----LEIDLLKSVCQRYLGNEIWCNFRIEKDNRV 204
Q +L SCT KWL A + P PP E L+ + R LG + + V
Sbjct: 336 QFVLRSCTGKLYKWLKVAPYKPQLPPDFGYEEWSTLRGI--RVLGLAYDPDHSVAAFCAV 393
Query: 205 SSVLKDLSKLVKCYNTAIDKLTEVITNEDNFNYPSFALEFKKYLDDNSPYPKPYEFISSS 384
++V D+S ++ N K N N + L + L D KP+ + +
Sbjct: 394 TTVEGDISDYLRLPNILKRK------NSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGA 447
Query: 385 VKSDENNMV--IKHLMSDLKLAEPTFMFNPVDVE 480
D N+ IK ++ +L+ +E F P++VE
Sbjct: 448 ESRDAQNIQADIKEILHELETSE---QFPPIEVE 478
>AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein
protein.
Length = 1827
Score = 29.9 bits (64), Expect = 5.1
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Frame = +1
Query: 43 QXMLNSCTKNALKWL--AKHYPPTPP----LEIDLLKSVCQRYLGNEIWCNFRIEKDNRV 204
Q +L SCT KWL A + P PP E L+ + R LG + + V
Sbjct: 741 QFVLRSCTGKLYKWLKVAPYKPQLPPDFGYEEWSTLRGI--RVLGLAYDPDHSVAAFCAV 798
Query: 205 SSVLKDLSKLVKCYNTAIDKLTEVITNEDNFNYPSFALEFKKYLDDNSPYPKPYEFISSS 384
++V D+S ++ N K N N + L + L D KP+ + +
Sbjct: 799 TTVEGDISDYLRLPNILKRK------NSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGA 852
Query: 385 VKSDENNMV--IKHLMSDLKLAEPTFMFNPVDVE 480
D N+ IK ++ +L+ +E F P++VE
Sbjct: 853 ESRDAQNIQADIKEILHELETSE---QFPPIEVE 883
>AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein
protein.
Length = 1831
Score = 29.9 bits (64), Expect = 5.1
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Frame = +1
Query: 43 QXMLNSCTKNALKWL--AKHYPPTPP----LEIDLLKSVCQRYLGNEIWCNFRIEKDNRV 204
Q +L SCT KWL A + P PP E L+ + R LG + + V
Sbjct: 745 QFVLRSCTGKLYKWLKVAPYKPQLPPDFGYEEWSTLRGI--RVLGLAYDPDHSVAAFCAV 802
Query: 205 SSVLKDLSKLVKCYNTAIDKLTEVITNEDNFNYPSFALEFKKYLDDNSPYPKPYEFISSS 384
++V D+S ++ N K N N + L + L D KP+ + +
Sbjct: 803 TTVEGDISDYLRLPNILKRK------NSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGA 856
Query: 385 VKSDENNMV--IKHLMSDLKLAEPTFMFNPVDVE 480
D N+ IK ++ +L+ +E F P++VE
Sbjct: 857 ESRDAQNIQADIKEILHELETSE---QFPPIEVE 887
>AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA
protein.
Length = 1831
Score = 29.9 bits (64), Expect = 5.1
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Frame = +1
Query: 43 QXMLNSCTKNALKWL--AKHYPPTPP----LEIDLLKSVCQRYLGNEIWCNFRIEKDNRV 204
Q +L SCT KWL A + P PP E L+ + R LG + + V
Sbjct: 745 QFVLRSCTGKLYKWLKVAPYKPQLPPDFGYEEWSTLRGI--RVLGLAYDPDHSVAAFCAV 802
Query: 205 SSVLKDLSKLVKCYNTAIDKLTEVITNEDNFNYPSFALEFKKYLDDNSPYPKPYEFISSS 384
++V D+S ++ N K N N + L + L D KP+ + +
Sbjct: 803 TTVEGDISDYLRLPNILKRK------NSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGA 856
Query: 385 VKSDENNMV--IKHLMSDLKLAEPTFMFNPVDVE 480
D N+ IK ++ +L+ +E F P++VE
Sbjct: 857 ESRDAQNIQADIKEILHELETSE---QFPPIEVE 887
>AE014296-1774|AAF50188.1| 117|Drosophila melanogaster CG6709-PA
protein.
Length = 117
Score = 29.1 bits (62), Expect = 9.0
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 391 SDENNMVIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQIGWLENSDEIVCKVITVL 570
+D+ + KH + L L F P D+EN + + WLE + ++
Sbjct: 2 ADDEDKPKKHTLDSLFLVYSNFQVIPTDIENEYFDSILLSQLDAWLEQA--------KLM 53
Query: 571 PNEL--TDLNMSCENFKKYFMNY-NLIDMLN 654
PN + T + +KK+ + Y + +++LN
Sbjct: 54 PNPITRTQTGLIYMRYKKWRLEYEDFLEVLN 84
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,780,241
Number of Sequences: 53049
Number of extensions: 758363
Number of successful extensions: 1785
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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