Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_A14
         (922 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    28   0.14 
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    24   2.2  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    24   2.2  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    24   2.2  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    24   2.2  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    24   2.2  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    24   2.2  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    24   2.2  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   3.0  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   3.0  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   3.9  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   6.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   6.8  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 0.14
 Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 463 NPVDVENMQYQI--RTYCKQIGWLENSDEIVCKVITVLPNELTDLNMSCENFKKYFMNYN 636
           +P + +  +Y+I    Y + +   E  D +   +   L +E TDL M   +F K F  + 
Sbjct: 240 DPYNTKFFRYRITPELYSEHLVVPEIEDNLETSLFRPLSSEATDLRMGVASFCKAFPWHF 299

Query: 637 LIDMLNVIVYEKINSLKNFGN 699
           ++D    +V   +  ++ FG+
Sbjct: 300 VVDRQLELVQLGVGFMRIFGH 320


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 553 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 663
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 553 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 663
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 553 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 663
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 553 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 663
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 553 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 663
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 601 CENFKKYFMNYNLIDMLNVIV 663
           C N+KK + N N I+ + + V
Sbjct: 101 CNNYKKLYYNINYIEQIPIPV 121


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 601 CENFKKYFMNYNLIDMLNVIV 663
           C N+KK + N N I+ + + V
Sbjct: 101 CNNYKKLYYNINYIEQIPIPV 121


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 63  YKKCIKMAC*ALPTDAAFRDRFVK 134
           Y KCI +A  A+  D    D FVK
Sbjct: 71  YMKCIMIATKAMKNDVILWDFFVK 94


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 63  YKKCIKMAC*ALPTDAAFRDRFVK 134
           Y KCI +A  A+  D    D FVK
Sbjct: 45  YMKCIMIATKAMKNDVILWDFFVK 68


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 553 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 663
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINHIEQIPVPV 116


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 524 QPICLQ*VRI*YCIFSTSTGLNINVGSANFRSDIKCFM 411
           QPIC+        I       N+NV   N +S ++C M
Sbjct: 30  QPICVGETGTSQKIIDEVYNGNVNVEDENVQSYVECMM 67


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 292 NFNYPSFALEFKKYLDDNSPYPKPYEFISSSV 387
           N NY  F    K+    N+ +    +F+S +V
Sbjct: 447 NKNYTKFCSTEKRLTKQNTAFENQLQFVSDAV 478


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,817
Number of Sequences: 438
Number of extensions: 5319
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)